RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 USP49Q70CQ1 688 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 SLC51AQ86UW1 340 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 RTFDC1Q9BY42 306 aaPredicted RBP20.47■□□□□ 0.87
GNE-204ENST00000539208 PDCL3Q9H2J4 239 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 PODXL2Q9NZ53 605 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 NAV1Q8NEY1 1877 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 CALML3P27482 149 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 HOXA10P31260 410 aaPredicted RBP20.46■□□□□ 0.87
GNE-204ENST00000539208 NLRP5P59047 1200 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 ATP2C1P98194 919 aaPredicted RBP20.46■□□□□ 0.87
GNE-204ENST00000539208 MTERF4Q7Z6M4 381 aaKnown RBP20.46■□□□□ 0.87
GNE-204ENST00000539208 PNMA1Q8ND90 353 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 C16orf45Q96MC5 204 aaPredicted RBP20.46■□□□□ 0.87
GNE-204ENST00000539208 MKNK2Q9HBH9 465 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 GGA1Q9UJY5 639 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 PAXBP1Q9Y5B6 917 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 SLFN14P0C7P3 912 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 PRR29P0C7W0 189 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 TNNT1P13805 278 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 UBASH3AP57075 661 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 GRM4Q14833 912 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 SH3RF1Q7Z6J0 888 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 DYNLL2Q96FJ2 89 aa20.46■□□□□ 0.87
GNE-204ENST00000539208 GPR75-ASB3A0A0A6YYF3 556 aa20.45■□□□□ 0.86
GNE-204ENST00000539208 UFL1O94874 794 aa20.45■□□□□ 0.86
GNE-204ENST00000539208 ARMCX5Q6P1M9 558 aa20.45■□□□□ 0.86
GNE-204ENST00000539208 ENOX1Q8TC92 643 aaKnown RBP20.45■□□□□ 0.86
GNE-204ENST00000539208 TGFBRAP1Q8WUH2 860 aa20.45■□□□□ 0.86
GNE-204ENST00000539208 FAM163AQ96GL9 167 aaPredicted RBP20.45■□□□□ 0.86
GNE-204ENST00000539208 ZNF287Q9HBT7 754 aa20.45■□□□□ 0.86
GNE-204ENST00000539208 FANCLQ9NW38 375 aa20.45■□□□□ 0.86
GNE-204ENST00000539208 RIOK3O14730 519 aaKnown RBP20.45■□□□□ 0.86
GNE-204ENST00000539208 SERPINC1P01008 464 aa20.45■□□□□ 0.86
GNE-204ENST00000539208 ZNF174Q15697 407 aa20.45■□□□□ 0.86
GNE-204ENST00000539208 ZNF444Q8N0Y2 327 aaPredicted RBP20.45■□□□□ 0.86
GNE-204ENST00000539208 FAM177A1Q8N128 213 aaPredicted RBP20.45■□□□□ 0.86
GNE-204ENST00000539208 PDILTQ8N807 584 aa20.45■□□□□ 0.86
GNE-204ENST00000539208 WNT7AO00755 349 aa20.44■□□□□ 0.86
GNE-204ENST00000539208 SFPQP23246 707 aaKnown RBP eCLIP20.44■□□□□ 0.86
GNE-204ENST00000539208 RBM10P98175 930 aaKnown RBP20.44■□□□□ 0.86
GNE-204ENST00000539208 NYAP1Q6ZVC0 841 aa20.44■□□□□ 0.86
GNE-204ENST00000539208 CCAR2Q8N163 923 aaKnown RBP20.44■□□□□ 0.86
GNE-204ENST00000539208 SYMPKQ92797 1274 aaKnown RBP20.44■□□□□ 0.86
GNE-204ENST00000539208 EPSTI1Q96J88 318 aa20.44■□□□□ 0.86
GNE-204ENST00000539208 CRAMP1Q96RY5 1269 aa20.44■□□□□ 0.86
GNE-204ENST00000539208 KLRG2A4D1S0 409 aaPredicted RBP20.44■□□□□ 0.86
GNE-204ENST00000539208 TSPY3P0CV98 308 aa20.44■□□□□ 0.86
GNE-204ENST00000539208 TSPY8P0CW00 308 aa20.44■□□□□ 0.86
GNE-204ENST00000539208 PLCG2P16885 1265 aa20.44■□□□□ 0.86
GNE-204ENST00000539208 ERCC5P28715 1186 aaPredicted RBP20.44■□□□□ 0.86
GNE-204ENST00000539208 PTGDRQ13258 359 aa20.44■□□□□ 0.86
GNE-204ENST00000539208 NOM1Q5C9Z4 860 aaKnown RBP20.44■□□□□ 0.86
GNE-204ENST00000539208 GPR101Q96P66 508 aaPredicted RBP20.44■□□□□ 0.86
GNE-204ENST00000539208 MAD2L2Q9UI95 211 aa20.44■□□□□ 0.86
GNE-204ENST00000539208 A0A087X0B3 334 aa20.43■□□□□ 0.86
GNE-204ENST00000539208 NRDCO43847 1150 aa20.43■□□□□ 0.86
GNE-204ENST00000539208 SLF2Q8IX21 1173 aa20.43■□□□□ 0.86
GNE-204ENST00000539208 PYM1Q9BRP8 204 aaKnown RBP20.43■□□□□ 0.86
GNE-204ENST00000539208 VEGFAP15692 232 aaPredicted RBP20.42■□□□□ 0.86
GNE-204ENST00000539208 ZNF18P17022 549 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 BTDP43251 543 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 PLCD1P51178 756 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 PIK3AP1Q6ZUJ8 805 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 TMC4Q7Z404 712 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 VSTM4Q8IW00 320 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 GRAMD1CQ8IYS0 662 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 BLIDQ8IZY5 108 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 TBC1D22AQ8WUA7 517 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 DPF2Q92785 391 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 DHX58Q96C10 678 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 LZTS2Q9BRK4 669 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 CTIFO43310 598 aaKnown RBP20.42■□□□□ 0.86
GNE-204ENST00000539208 RASA1P20936 1047 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 SLC4A8Q2Y0W8 1093 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 ARL6IP4Q66PJ3 421 aaKnown RBP20.42■□□□□ 0.86
GNE-204ENST00000539208 PAGE5Q96GU1 130 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 PCDHA4Q9UN74 947 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 CDK5RAP2Q96SN8 1893 aa20.42■□□□□ 0.86
GNE-204ENST00000539208 DDX60LQ5H9U9 1706 aaKnown RBP20.41■□□□□ 0.86
GNE-204ENST00000539208 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 USP27XA6NNY8 438 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 HMGB2P26583 209 aaKnown RBP20.41■□□□□ 0.86
GNE-204ENST00000539208 PTPN14Q15678 1187 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 CFAP100Q494V2 611 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 CEP135Q66GS9 1140 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 GALNT17Q6IS24 598 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 C16orf86Q6ZW13 317 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 MAPKAPK5Q8IW41 473 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 GSDMAQ96QA5 445 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 PALM3A6NDB9 673 aaPredicted RBP20.41■□□□□ 0.86
GNE-204ENST00000539208 FMR1Q06787 632 aaKnown RBP eCLIP20.41■□□□□ 0.86
GNE-204ENST00000539208 STAG2Q8N3U4 1231 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 DAGLBQ8NCG7 672 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 TBC1D16Q8TBP0 767 aa20.41■□□□□ 0.86
GNE-204ENST00000539208 GAKO14976 1311 aa20.4■□□□□ 0.86
GNE-204ENST00000539208 PSDA5PKW4 1024 aaPredicted RBP20.4■□□□□ 0.86
GNE-204ENST00000539208 VWA3AA6NCI4 1184 aa20.4■□□□□ 0.86
GNE-204ENST00000539208 M0R2N6 131 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms