RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 NUCB2P80303 420 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
LDHA-216ENST00000538451 SEC23AQ15436 765 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 RTN1Q16799 776 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 CDC37L1Q7L3B6 337 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 USP48Q86UV5 1035 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 MICU3Q86XE3 530 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 CCDC83Q8IWF9 413 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 TRIM22Q8IYM9 498 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 ZNF654Q8IZM8 581 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 NUP133Q8WUM0 1156 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 WASF1Q92558 559 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
LDHA-216ENST00000538451 CTNND1O60716 968 aaKnown RBP11.76□□□□□ -0.53
LDHA-216ENST00000538451 MAP3K10Q02779 954 aa11.76□□□□□ -0.53
LDHA-216ENST00000538451 KRT26Q7Z3Y9 468 aa11.76□□□□□ -0.53
LDHA-216ENST00000538451 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
LDHA-216ENST00000538451 PNMA1Q8ND90 353 aa11.76□□□□□ -0.53
LDHA-216ENST00000538451 LZTS2Q9BRK4 669 aa11.76□□□□□ -0.53
LDHA-216ENST00000538451 LARP6Q9BRS8 491 aaKnown RBP11.76□□□□□ -0.53
LDHA-216ENST00000538451 CHMP5Q9NZZ3 219 aa11.76□□□□□ -0.53
LDHA-216ENST00000538451 NYAP2Q9P242 653 aa11.76□□□□□ -0.53
LDHA-216ENST00000538451 RBM27Q9P2N5 1060 aaKnown RBP11.76□□□□□ -0.53
LDHA-216ENST00000538451 PGAP2Q9UHJ9 254 aa11.76□□□□□ -0.53
LDHA-216ENST00000538451 MYH8P13535 1937 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 AKR1B1P15121 316 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 CD44P16070 742 aaKnown RBP11.75□□□□□ -0.53
LDHA-216ENST00000538451 XBP1P17861 261 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 HIRAP54198 1017 aaPredicted RBP11.75□□□□□ -0.53
LDHA-216ENST00000538451 CCT2P78371 535 aaKnown RBP11.75□□□□□ -0.53
LDHA-216ENST00000538451 ATP2B2Q01814 1243 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 ICA1Q05084 483 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 RAB3GAP1Q15042 981 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 MIGA2Q7L4E1 593 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 CEP95Q96GE4 821 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 AS3MTQ9HBK9 375 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 PICK1Q9NRD5 415 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 BRPF3Q9ULD4 1205 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 TACC3Q9Y6A5 838 aa11.75□□□□□ -0.53
LDHA-216ENST00000538451 SMIM22K7EJ46 135 aa11.74□□□□□ -0.53
LDHA-216ENST00000538451 GH2P01242 217 aa11.74□□□□□ -0.53
LDHA-216ENST00000538451 CAP2P40123 477 aa11.74□□□□□ -0.53
LDHA-216ENST00000538451 IREB2P48200 963 aaKnown RBP11.74□□□□□ -0.53
LDHA-216ENST00000538451 SSRP1Q08945 709 aaKnown RBP11.74□□□□□ -0.53
LDHA-216ENST00000538451 SCRN1Q12765 414 aa11.74□□□□□ -0.53
LDHA-216ENST00000538451 NECAB1Q8N987 351 aa11.74□□□□□ -0.53
LDHA-216ENST00000538451 JMYQ8N9B5 988 aa11.74□□□□□ -0.53
LDHA-216ENST00000538451 TEPSINQ96N21 525 aa11.74□□□□□ -0.53
LDHA-216ENST00000538451 TMEM47Q9BQJ4 181 aa11.74□□□□□ -0.53
LDHA-216ENST00000538451 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
LDHA-216ENST00000538451 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
LDHA-216ENST00000538451 IL17RBQ9NRM6 502 aa11.74□□□□□ -0.53
LDHA-216ENST00000538451 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
LDHA-216ENST00000538451 CEP350Q5VT06 3117 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 NID2Q14112 1375 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 IGKV6D-41A0A0C4DH26 115 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 FAM196BA6NMK8 535 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 NMT2O60551 498 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 GDF11O95390 407 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 PARP1P09874 1014 aaKnown RBP11.73□□□□□ -0.53
LDHA-216ENST00000538451 GJB2P29033 226 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 NOVP48745 357 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 TRIM29Q14134 588 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 ASPRV1Q53RT3 343 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 GPATCH4Q5T3I0 446 aaKnown RBP11.73□□□□□ -0.53
LDHA-216ENST00000538451 NBPF12Q5TAG4 269 aaPredicted RBP11.73□□□□□ -0.53
LDHA-216ENST00000538451 RCSD1Q6JBY9 416 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 RGS22Q8NE09 1264 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 MKL1Q969V6 931 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 DNAJC18Q9H819 358 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 ZBTB21Q9ULJ3 1066 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 ATP6V1DQ9Y5K8 247 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 CSADQ9Y600 493 aa11.73□□□□□ -0.53
LDHA-216ENST00000538451 ASTN2O75129 1339 aaPredicted RBP11.72□□□□□ -0.53
LDHA-216ENST00000538451 H3BQV1 296 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 LARGE1O95461 756 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 IFNAR1P17181 557 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 SMARCA1P28370 1054 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 TROAPQ12815 778 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 SEPT2Q15019 361 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 LARP1BQ659C4 914 aaKnown RBP11.72□□□□□ -0.53
LDHA-216ENST00000538451 ARMC9Q7Z3E5 817 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 ZNF467Q7Z7K2 595 aaPredicted RBP11.72□□□□□ -0.53
LDHA-216ENST00000538451 WRNIP1Q96S55 665 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 GLIS2Q9BZE0 524 aaPredicted RBP11.72□□□□□ -0.53
LDHA-216ENST00000538451 GPHNQ9NQX3 736 aaPredicted RBP11.72□□□□□ -0.53
LDHA-216ENST00000538451 ABT1Q9ULW3 272 aaKnown RBP11.72□□□□□ -0.53
LDHA-216ENST00000538451 PCDHB8Q9UN66 801 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 PCDHB13Q9Y5F0 798 aa11.72□□□□□ -0.53
LDHA-216ENST00000538451 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.53
LDHA-216ENST00000538451 PTPDC1A2A3K4 754 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 UNCXA6NJT0 531 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 USP17L5A8MUK1 530 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 TRAF5O00463 557 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 RAD21O60216 631 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 EEF2P13639 858 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms