RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 HPSEQ9Y251 543 aa20.05■□□□□ 0.8
SNX17-210ENST00000537606 NLRP5P59047 1200 aa20.05■□□□□ 0.8
SNX17-210ENST00000537606 ANKS1AQ92625 1134 aa20.05■□□□□ 0.8
SNX17-210ENST00000537606 USP40Q9NVE5 1235 aa20.05■□□□□ 0.8
SNX17-210ENST00000537606 NRBP1Q9UHY1 535 aa20.05■□□□□ 0.8
SNX17-210ENST00000537606 SLURP2P0DP57 97 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 SLC35G1Q2M3R5 365 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 ZNF287Q9HBT7 754 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 TCP11L1Q9NUJ3 509 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 ANO10Q9NW15 660 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 FBXO2Q9UK22 296 aaPredicted RBP20.04■□□□□ 0.8
SNX17-210ENST00000537606 PCDHAC2Q9Y5I4 1007 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 PTGS1P23219 599 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 ZNF75DP51815 510 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 PFKFB3Q16875 520 aaPredicted RBP20.04■□□□□ 0.8
SNX17-210ENST00000537606 LONRF3Q496Y0 759 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 KCNH3Q9ULD8 1083 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 SNED1Q8TER0 1413 aa20.04■□□□□ 0.8
SNX17-210ENST00000537606 DPCR1Q3MIW9 517 aa20.03■□□□□ 0.8
SNX17-210ENST00000537606 KIAA0825Q8IV33 1275 aa20.03■□□□□ 0.8
SNX17-210ENST00000537606 DRC7Q8IY82 874 aa20.03■□□□□ 0.8
SNX17-210ENST00000537606 CEP95Q96GE4 821 aa20.03■□□□□ 0.8
SNX17-210ENST00000537606 CAMKK2Q96RR4 588 aa20.03■□□□□ 0.8
SNX17-210ENST00000537606 PYCARDQ9ULZ3 195 aa20.03■□□□□ 0.8
SNX17-210ENST00000537606 PTPREP23469 700 aa20.03■□□□□ 0.8
SNX17-210ENST00000537606 GRM4Q14833 912 aa20.03■□□□□ 0.8
SNX17-210ENST00000537606 PLA2G4DQ86XP0 818 aa20.03■□□□□ 0.8
SNX17-210ENST00000537606 TNS1Q9HBL0 1735 aaKnown RBP20.03■□□□□ 0.8
SNX17-210ENST00000537606 MYH1P12882 1939 aa20.02■□□□□ 0.8
SNX17-210ENST00000537606 GOLGA6L19H0YKK7 550 aa20.02■□□□□ 0.8
SNX17-210ENST00000537606 CYTH3O43739 400 aa20.02■□□□□ 0.8
SNX17-210ENST00000537606 PNOCQ13519 176 aa20.02■□□□□ 0.8
SNX17-210ENST00000537606 ZNF174Q15697 407 aa20.02■□□□□ 0.8
SNX17-210ENST00000537606 DDX60LQ5H9U9 1706 aaKnown RBP20.02■□□□□ 0.8
SNX17-210ENST00000537606 USP49Q70CQ1 688 aa20.02■□□□□ 0.8
SNX17-210ENST00000537606 DHX40Q8IX18 779 aaKnown RBP20.02■□□□□ 0.8
SNX17-210ENST00000537606 BRMS1Q9HCU9 246 aa20.02■□□□□ 0.8
SNX17-210ENST00000537606 TRIM75PA6NK02 468 aa20.02■□□□□ 0.79
SNX17-210ENST00000537606 ZRSR1Q15695 479 aaKnown RBP20.02■□□□□ 0.79
SNX17-210ENST00000537606 PIK3AP1Q6ZUJ8 805 aa20.02■□□□□ 0.79
SNX17-210ENST00000537606 NEDD1Q8NHV4 660 aa20.02■□□□□ 0.79
SNX17-210ENST00000537606 TNFRSF25Q93038 417 aa20.02■□□□□ 0.79
SNX17-210ENST00000537606 STK32BQ9NY57 414 aa20.02■□□□□ 0.79
SNX17-210ENST00000537606 SLX4Q8IY92 1834 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 BECN2A8MW95 431 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 CACNB3P54284 484 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 EIF6P56537 245 aaKnown RBP20.01■□□□□ 0.79
SNX17-210ENST00000537606 CCDC178Q5BJE1 867 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 CDC42EP5Q6NZY7 148 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 USP17L2Q6R6M4 530 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 CCDC186Q7Z3E2 898 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 CLEC10AQ8IUN9 316 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 PDILTQ8N807 584 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 SUGT1Q9Y2Z0 365 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 FOXN1O15353 648 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 NFIAQ12857 509 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 APOBEC3HQ6NTF7 200 aaKnown RBP20.01■□□□□ 0.79
SNX17-210ENST00000537606 TYW1BQ6NUM6 668 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 AOPEPQ8N6M6 819 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 CSRNP2Q9H175 543 aa20.01■□□□□ 0.79
SNX17-210ENST00000537606 ADAMTSL1Q8N6G6 1762 aa20■□□□□ 0.79
SNX17-210ENST00000537606 CAVIN2O95810 425 aa20■□□□□ 0.79
SNX17-210ENST00000537606 NOLC1Q14978 699 aaKnown RBP eCLIP20■□□□□ 0.79
SNX17-210ENST00000537606 STYK1Q6J9G0 422 aa20■□□□□ 0.79
SNX17-210ENST00000537606 PODNQ7Z5L7 613 aa20■□□□□ 0.79
SNX17-210ENST00000537606 CEP57L1Q8IYX8 460 aa20■□□□□ 0.79
SNX17-210ENST00000537606 CNNM3Q8NE01 707 aa20■□□□□ 0.79
SNX17-210ENST00000537606 RASGRP4Q8TDF6 673 aa20■□□□□ 0.79
SNX17-210ENST00000537606 TEKT1Q969V4 418 aa20■□□□□ 0.79
SNX17-210ENST00000537606 FAM237AA0A1B0GTK4 181 aa20■□□□□ 0.79
SNX17-210ENST00000537606 POLR2DO15514 142 aaKnown RBP20■□□□□ 0.79
SNX17-210ENST00000537606 AOC3Q16853 763 aa20■□□□□ 0.79
SNX17-210ENST00000537606 ZFPM1Q8IX07 1006 aa20■□□□□ 0.79
SNX17-210ENST00000537606 TIGD1Q96MW7 591 aa20■□□□□ 0.79
SNX17-210ENST00000537606 CEP131Q9UPN4 1083 aa20■□□□□ 0.79
SNX17-210ENST00000537606 SRPRBQ9Y5M8 271 aaKnown RBP20■□□□□ 0.79
SNX17-210ENST00000537606 KLRF2D3W0D1 207 aa19.99■□□□□ 0.79
SNX17-210ENST00000537606 ECE2O60344 883 aa19.99■□□□□ 0.79
SNX17-210ENST00000537606 CRKP46108 304 aa19.99■□□□□ 0.79
SNX17-210ENST00000537606 RBM5P52756 815 aaKnown RBP eCLIP19.99■□□□□ 0.79
SNX17-210ENST00000537606 LRMPQ12912 555 aa19.99■□□□□ 0.79
SNX17-210ENST00000537606 METTL16Q86W50 562 aaKnown RBP19.99■□□□□ 0.79
SNX17-210ENST00000537606 VAT1LQ9HCJ6 419 aa19.99■□□□□ 0.79
SNX17-210ENST00000537606 PALM3A6NDB9 673 aaPredicted RBP19.98■□□□□ 0.79
SNX17-210ENST00000537606 AKR1B1P15121 316 aa19.98■□□□□ 0.79
SNX17-210ENST00000537606 KRBA2Q6ZNG9 492 aa19.98■□□□□ 0.79
SNX17-210ENST00000537606 HEATR3Q7Z4Q2 680 aa19.98■□□□□ 0.79
SNX17-210ENST00000537606 FOXP4Q8IVH2 680 aaPredicted RBP19.98■□□□□ 0.79
SNX17-210ENST00000537606 GOLGA6L6A8MZA4 724 aa19.98■□□□□ 0.79
SNX17-210ENST00000537606 TCP10Q12799 353 aa19.98■□□□□ 0.79
SNX17-210ENST00000537606 TTC38Q5R3I4 469 aa19.98■□□□□ 0.79
SNX17-210ENST00000537606 DEFB132Q7Z7B7 95 aa19.98■□□□□ 0.79
SNX17-210ENST00000537606 HOMER1Q86YM7 354 aa19.98■□□□□ 0.79
SNX17-210ENST00000537606 FAM13BQ9NYF5 915 aa19.98■□□□□ 0.79
SNX17-210ENST00000537606 CLIP2Q9UDT6 1046 aa19.98■□□□□ 0.79
SNX17-210ENST00000537606 NT5C2P49902 561 aa19.97■□□□□ 0.79
SNX17-210ENST00000537606 GNAQP50148 359 aa19.97■□□□□ 0.79
SNX17-210ENST00000537606 GABPAQ06546 454 aa19.97■□□□□ 0.79
SNX17-210ENST00000537606 CCDC144BQ3MJ40 725 aa19.97■□□□□ 0.79
SNX17-210ENST00000537606 WWC2Q6AWC2 1192 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms