RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 FOXR1Q6PIV2 292 aa20.38■□□□□ 0.85
RAB40C-203ENST00000535977 MLKLQ8NB16 471 aa20.38■□□□□ 0.85
RAB40C-203ENST00000535977 DDAH1O94760 285 aa20.37■□□□□ 0.85
RAB40C-203ENST00000535977 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
RAB40C-203ENST00000535977 UBASH3AP57075 661 aa20.37■□□□□ 0.85
RAB40C-203ENST00000535977 RC3H1Q5TC82 1133 aaKnown RBP20.37■□□□□ 0.85
RAB40C-203ENST00000535977 LEKR1Q6ZMV7 388 aa20.37■□□□□ 0.85
RAB40C-203ENST00000535977 IQSEC3Q9UPP2 1182 aaPredicted RBP20.37■□□□□ 0.85
RAB40C-203ENST00000535977 SRRTQ9BXP5 876 aaKnown RBP20.37■□□□□ 0.85
RAB40C-203ENST00000535977 FUT8Q9BYC5 575 aa20.37■□□□□ 0.85
RAB40C-203ENST00000535977 CACNA1SQ13698 1873 aa20.37■□□□□ 0.85
RAB40C-203ENST00000535977 A0A1B0GUL6 1792 aa20.36■□□□□ 0.85
RAB40C-203ENST00000535977 UBE2Q2LH0YL09 131 aa20.36■□□□□ 0.85
RAB40C-203ENST00000535977 SERPINC1P01008 464 aa20.36■□□□□ 0.85
RAB40C-203ENST00000535977 IVLP07476 585 aa20.36■□□□□ 0.85
RAB40C-203ENST00000535977 POSTNQ15063 836 aa20.36■□□□□ 0.85
RAB40C-203ENST00000535977 ENAHQ8N8S7 591 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-203ENST00000535977 EIF3CLB5ME19 914 aaKnown RBP20.36■□□□□ 0.85
RAB40C-203ENST00000535977 EIF3CQ99613 913 aaKnown RBP20.36■□□□□ 0.85
RAB40C-203ENST00000535977 HSD3B7Q9H2F3 369 aa20.36■□□□□ 0.85
RAB40C-203ENST00000535977 ARFGAP3Q9NP61 516 aa20.36■□□□□ 0.85
RAB40C-203ENST00000535977 TAOK2Q9UL54 1235 aa20.36■□□□□ 0.85
RAB40C-203ENST00000535977 TRIM75PA6NK02 468 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 ORC4O43929 436 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 KRT2P35908 639 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 RPS8P62241 208 aaKnown RBP20.35■□□□□ 0.85
RAB40C-203ENST00000535977 LINC00116Q8NCU8 138 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 PHF20Q9BVI0 1012 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 ATP8A2Q9NTI2 1148 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 SARSP49591 514 aaKnown RBP20.35■□□□□ 0.85
RAB40C-203ENST00000535977 ISM2Q6H9L7 571 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 TRIM65Q6PJ69 517 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 FOXP4Q8IVH2 680 aaPredicted RBP20.35■□□□□ 0.85
RAB40C-203ENST00000535977 CCDC82Q8N4S0 544 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 NLRP3Q96P20 1036 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 CRNKL1Q9BZJ0 848 aaKnown RBP20.35■□□□□ 0.85
RAB40C-203ENST00000535977 DUOX1Q9NRD9 1551 aa20.35■□□□□ 0.85
RAB40C-203ENST00000535977 BRD2P25440 801 aaKnown RBP20.34■□□□□ 0.85
RAB40C-203ENST00000535977 DEF6Q9H4E7 631 aa20.34■□□□□ 0.85
RAB40C-203ENST00000535977 CABP5Q9NP86 173 aa20.34■□□□□ 0.85
RAB40C-203ENST00000535977 AATFQ9NY61 560 aaKnown RBP eCLIP20.34■□□□□ 0.85
RAB40C-203ENST00000535977 PCDHB6Q9Y5E3 794 aa20.34■□□□□ 0.85
RAB40C-203ENST00000535977 COL1A1P02452 1464 aaPredicted RBP20.34■□□□□ 0.85
RAB40C-203ENST00000535977 POLR2DO15514 142 aaKnown RBP20.34■□□□□ 0.85
RAB40C-203ENST00000535977 KCNQ2O43526 872 aa20.34■□□□□ 0.85
RAB40C-203ENST00000535977 NR5A1Q13285 461 aa20.34■□□□□ 0.85
RAB40C-203ENST00000535977 EP400NLQ6ZTU2 488 aa20.34■□□□□ 0.85
RAB40C-203ENST00000535977 PARP3Q9Y6F1 533 aa20.34■□□□□ 0.85
RAB40C-203ENST00000535977 FUT2Q10981 343 aa20.33■□□□□ 0.85
RAB40C-203ENST00000535977 E2F4Q16254 413 aa20.33■□□□□ 0.85
RAB40C-203ENST00000535977 FERMT2Q96AC1 680 aa20.33■□□□□ 0.85
RAB40C-203ENST00000535977 NARFQ9UHQ1 456 aa20.33■□□□□ 0.85
RAB40C-203ENST00000535977 PKN1Q16512 942 aa20.33■□□□□ 0.85
RAB40C-203ENST00000535977 C3orf67Q6ZVT6 689 aa20.33■□□□□ 0.85
RAB40C-203ENST00000535977 GPR161Q8N6U8 529 aaKnown RBP20.33■□□□□ 0.85
RAB40C-203ENST00000535977 ENOX1Q8TC92 643 aaKnown RBP20.33■□□□□ 0.85
RAB40C-203ENST00000535977 NSUN4Q96CB9 384 aaKnown RBP20.33■□□□□ 0.85
RAB40C-203ENST00000535977 SETDB2Q96T68 719 aa20.33■□□□□ 0.85
RAB40C-203ENST00000535977 MYH6P13533 1939 aa20.33■□□□□ 0.84
RAB40C-203ENST00000535977 HIBADHP31937 336 aaKnown RBP20.33■□□□□ 0.84
RAB40C-203ENST00000535977 DYNLL1P63167 89 aaKnown RBP20.33■□□□□ 0.84
RAB40C-203ENST00000535977 CFAP100Q494V2 611 aa20.33■□□□□ 0.84
RAB40C-203ENST00000535977 SBK1Q52WX2 424 aa20.33■□□□□ 0.84
RAB40C-203ENST00000535977 MAN1B1Q9UKM7 699 aa20.33■□□□□ 0.84
RAB40C-203ENST00000535977 SCN7AQ01118 1682 aa20.32■□□□□ 0.84
RAB40C-203ENST00000535977 TROAPQ12815 778 aa20.32■□□□□ 0.84
RAB40C-203ENST00000535977 SPTY2D1Q68D10 685 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-203ENST00000535977 VSTM4Q8IW00 320 aa20.32■□□□□ 0.84
RAB40C-203ENST00000535977 CELF1Q92879 486 aaKnown RBP20.32■□□□□ 0.84
RAB40C-203ENST00000535977 PARD6BQ9BYG5 372 aa20.32■□□□□ 0.84
RAB40C-203ENST00000535977 SERTAD1Q9UHV2 236 aa20.32■□□□□ 0.84
RAB40C-203ENST00000535977 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.32■□□□□ 0.844e-6■■■□□ 15.8
RAB40C-203ENST00000535977 RPS6KA4O75676 772 aa20.32■□□□□ 0.84
RAB40C-203ENST00000535977 ATP1A3P13637 1013 aa20.32■□□□□ 0.84
RAB40C-203ENST00000535977 MORC3Q14149 939 aa20.32■□□□□ 0.84
RAB40C-203ENST00000535977 CMTR1Q8N1G2 835 aaKnown RBP20.32■□□□□ 0.84
RAB40C-203ENST00000535977 SPATA20Q8TB22 786 aa20.32■□□□□ 0.84
RAB40C-203ENST00000535977 VPS18Q9P253 973 aa20.32■□□□□ 0.84
RAB40C-203ENST00000535977 USP17L12C9JPN9 530 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 USP17L21D6R901 530 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 ANKRD65E5RJM6 399 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 FCHSD1Q86WN1 690 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 OXER1Q8TDS5 423 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 PPM1EQ8WY54 764 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 ARPP21Q9UBL0 812 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-203ENST00000535977 V9GY48 417 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-203ENST00000535977 AFF2P51816 1311 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 DLEC1Q9Y238 1755 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 ERCC5P28715 1186 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-203ENST00000535977 TPTE2Q6XPS3 522 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 TMTC3Q6ZXV5 915 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 CTCFLQ8NI51 663 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-203ENST00000535977 PYM1Q9BRP8 204 aaKnown RBP20.31■□□□□ 0.84
RAB40C-203ENST00000535977 FANCLQ9NW38 375 aa20.31■□□□□ 0.84
RAB40C-203ENST00000535977 TOP1P11387 765 aaKnown RBP20.3■□□□□ 0.84
RAB40C-203ENST00000535977 MECOMQ03112 1051 aa20.3■□□□□ 0.84
RAB40C-203ENST00000535977 SPECC1Q5M775 1068 aa20.3■□□□□ 0.84
RAB40C-203ENST00000535977 CSRNP2Q9H175 543 aa20.3■□□□□ 0.84
RAB40C-203ENST00000535977 MYH2Q9UKX2 1941 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms