RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 TMEM179Q6ZVK1 233 aa27.58■■■□□ 2.01
PKP3-210ENST00000533249 LRCH3Q96II8 777 aa27.58■■■□□ 2.01
PKP3-210ENST00000533249 SWAP70Q9UH65 585 aa27.58■■■□□ 2.01
PKP3-210ENST00000533249 MYH8P13535 1937 aa27.58■■■□□ 2.01
PKP3-210ENST00000533249 BAZ2AQ9UIF9 1905 aaKnown RBP27.57■■■□□ 2
PKP3-210ENST00000533249 COL6A1P12109 1028 aa27.57■■■□□ 2
PKP3-210ENST00000533249 GRB14Q14449 540 aa27.57■■■□□ 2
PKP3-210ENST00000533249 COG2Q14746 738 aa27.57■■■□□ 2
PKP3-210ENST00000533249 CLEC10AQ8IUN9 316 aa27.57■■■□□ 2
PKP3-210ENST00000533249 NPLOC4Q8TAT6 608 aa27.57■■■□□ 2
PKP3-210ENST00000533249 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.57■■■□□ 2
PKP3-210ENST00000533249 FRMPD3Q5JV73 1810 aa27.56■■■□□ 2
PKP3-210ENST00000533249 CNGA1P29973 690 aa27.56■■■□□ 2
PKP3-210ENST00000533249 BMP8BP34820 402 aa27.56■■■□□ 2
PKP3-210ENST00000533249 KIAA1755Q5JYT7 1200 aa27.56■■■□□ 2
PKP3-210ENST00000533249 MOV10L1Q9BXT6 1211 aaKnown RBP27.56■■■□□ 2
PKP3-210ENST00000533249 CHMP4BQ9H444 224 aaKnown RBP27.56■■■□□ 2
PKP3-210ENST00000533249 ATP8A2Q9NTI2 1148 aa27.56■■■□□ 2
PKP3-210ENST00000533249 HOXC10Q9NYD6 342 aa27.56■■■□□ 2
PKP3-210ENST00000533249 CYP2D7A0A087X1C5 515 aa27.55■■■□□ 2
PKP3-210ENST00000533249 CHGBP05060 677 aa27.55■■■□□ 2
PKP3-210ENST00000533249 HOXC6P09630 235 aa27.55■■■□□ 2
PKP3-210ENST00000533249 AKR1B1P15121 316 aa27.55■■■□□ 2
PKP3-210ENST00000533249 CYP2C19P33261 490 aa27.55■■■□□ 2
PKP3-210ENST00000533249 MAGEA10P43363 369 aaPredicted RBP27.55■■■□□ 2
PKP3-210ENST00000533249 HAUS7Q99871 368 aa27.55■■■□□ 2
PKP3-210ENST00000533249 RCAN3Q9UKA8 241 aa27.55■■■□□ 2
PKP3-210ENST00000533249 SMIM22K7EJ46 135 aa27.54■■■□□ 2
PKP3-210ENST00000533249 LRRC26Q2I0M4 334 aa27.54■■■□□ 2
PKP3-210ENST00000533249 ARHGEF10LQ9HCE6 1279 aa27.54■■■□□ 2
PKP3-210ENST00000533249 ICA1Q05084 483 aa27.53■■■□□ 2
PKP3-210ENST00000533249 SAMD1Q6SPF0 538 aaPredicted RBP27.53■■■□□ 2
PKP3-210ENST00000533249 DPP9Q86TI2 863 aa27.53■■■□□ 2
PKP3-210ENST00000533249 SPICE1Q8N0Z3 855 aa27.53■■■□□ 2
PKP3-210ENST00000533249 SPATC1LQ9H0A9 340 aa27.53■■■□□ 2
PKP3-210ENST00000533249 DDX20Q9UHI6 824 aaKnown RBP27.53■■■□□ 2
PKP3-210ENST00000533249 RLFQ13129 1914 aa27.53■■■□□ 2
PKP3-210ENST00000533249 MYH7P12883 1935 aa27.52■■■□□ 2
PKP3-210ENST00000533249 USP17L12C9JPN9 530 aa27.52■■■□□ 2
PKP3-210ENST00000533249 USP17L21D6R901 530 aa27.52■■■□□ 2
PKP3-210ENST00000533249 PLS1Q14651 629 aa27.52■■■□□ 2
PKP3-210ENST00000533249 C12orf60Q5U649 245 aa27.52■■■□□ 2
PKP3-210ENST00000533249 SIAH1Q8IUQ4 282 aa27.52■■■□□ 2
PKP3-210ENST00000533249 AMOTL1Q8IY63 956 aa27.52■■■□□ 2
PKP3-210ENST00000533249 A0A0G2JMZ2 1700 aa27.52■■■□□ 2
PKP3-210ENST00000533249 SMARCA5O60264 1052 aaPredicted RBP27.51■■□□□ 1.99
PKP3-210ENST00000533249 FLOT1O75955 427 aa27.51■■□□□ 1.99
PKP3-210ENST00000533249 ERCC3P19447 782 aa27.51■■□□□ 1.99
PKP3-210ENST00000533249 ADORA2AP29274 412 aa27.51■■□□□ 1.99
PKP3-210ENST00000533249 CDK8P49336 464 aa27.51■■□□□ 1.99
PKP3-210ENST00000533249 LPAR1Q92633 364 aa27.51■■□□□ 1.99
PKP3-210ENST00000533249 DDRGK1Q96HY6 314 aa27.51■■□□□ 1.99
PKP3-210ENST00000533249 LRRCC1Q9C099 1032 aa27.51■■□□□ 1.99
PKP3-210ENST00000533249 SH2D4AQ9H788 454 aa27.51■■□□□ 1.99
PKP3-210ENST00000533249 TMX2Q9Y320 296 aa27.51■■□□□ 1.99
PKP3-210ENST00000533249 DSG3P32926 999 aa27.5■■□□□ 1.99
PKP3-210ENST00000533249 UBE3CQ15386 1083 aa27.5■■□□□ 1.99
PKP3-210ENST00000533249 C20orf194Q5TEA3 1177 aa27.5■■□□□ 1.99
PKP3-210ENST00000533249 TRPV1Q8NER1 839 aa27.5■■□□□ 1.99
PKP3-210ENST00000533249 ATG4CQ96DT6 458 aa27.5■■□□□ 1.99
PKP3-210ENST00000533249 CCDC17Q96LX7 622 aa27.5■■□□□ 1.99
PKP3-210ENST00000533249 SENP6Q9GZR1 1112 aaPredicted RBP27.5■■□□□ 1.99
PKP3-210ENST00000533249 VCPKMTQ9H867 229 aa27.5■■□□□ 1.99
PKP3-210ENST00000533249 SLC4A4Q9Y6R1 1079 aa27.5■■□□□ 1.99
PKP3-210ENST00000533249 ZNF236Q9UL36 1845 aa27.49■■□□□ 1.99
PKP3-210ENST00000533249 STRNO43815 780 aa27.49■■□□□ 1.99
PKP3-210ENST00000533249 MSCO60682 206 aa27.49■■□□□ 1.99
PKP3-210ENST00000533249 MB21D1Q8N884 522 aa27.49■■□□□ 1.99
PKP3-210ENST00000533249 SHCBP1Q8NEM2 672 aa27.49■■□□□ 1.99
PKP3-210ENST00000533249 UBE2OQ9C0C9 1292 aaKnown RBP27.49■■□□□ 1.99
PKP3-210ENST00000533249 LAMA3Q16787 3333 aa27.48■■□□□ 1.99
PKP3-210ENST00000533249 CYBAP13498 195 aa27.48■■□□□ 1.99
PKP3-210ENST00000533249 ZSCAN25Q6NSZ9 544 aa27.48■■□□□ 1.99
PKP3-210ENST00000533249 C16orf86Q6ZW13 317 aa27.48■■□□□ 1.99
PKP3-210ENST00000533249 NCAPG2Q86XI2 1143 aa27.48■■□□□ 1.99
PKP3-210ENST00000533249 COBLO75128 1261 aa27.47■■□□□ 1.99
PKP3-210ENST00000533249 TDHQ8IZJ6 230 aa27.47■■□□□ 1.99
PKP3-210ENST00000533249 PUS7LQ9H0K6 701 aaKnown RBP27.47■■□□□ 1.99
PKP3-210ENST00000533249 WDR46O15213 610 aaKnown RBP27.46■■□□□ 1.99
PKP3-210ENST00000533249 IGHA2P01877 340 aa27.46■■□□□ 1.99
PKP3-210ENST00000533249 EEF2P13639 858 aaKnown RBP27.46■■□□□ 1.99
PKP3-210ENST00000533249 ATN1P54259 1190 aaPredicted RBP27.46■■□□□ 1.99
PKP3-210ENST00000533249 OLFML2BQ68BL8 750 aa27.46■■□□□ 1.99
PKP3-210ENST00000533249 CTR9Q6PD62 1173 aa27.46■■□□□ 1.99
PKP3-210ENST00000533249 MROH8Q9H579 483 aa27.46■■□□□ 1.99
PKP3-210ENST00000533249 MDM2Q00987 491 aaPredicted RBP27.45■■□□□ 1.98
PKP3-210ENST00000533249 ANO1Q5XXA6 986 aa27.45■■□□□ 1.98
PKP3-210ENST00000533249 PARP14Q460N5 1801 aa27.44■■□□□ 1.98
PKP3-210ENST00000533249 DNM1LO00429 736 aa27.44■■□□□ 1.98
PKP3-210ENST00000533249 RAD21O60216 631 aa27.44■■□□□ 1.98
PKP3-210ENST00000533249 KANSL2Q9H9L4 492 aa27.44■■□□□ 1.98
PKP3-210ENST00000533249 SLC5A4Q9NY91 659 aa27.44■■□□□ 1.98
PKP3-210ENST00000533249 TMEM132BQ14DG7 1078 aa27.43■■□□□ 1.98
PKP3-210ENST00000533249 LRIT3Q3SXY7 679 aa27.43■■□□□ 1.98
PKP3-210ENST00000533249 GJC2Q5T442 439 aaPredicted RBP27.43■■□□□ 1.98
PKP3-210ENST00000533249 ECHDC1Q9NTX5 307 aa27.43■■□□□ 1.98
PKP3-210ENST00000533249 FBXO28Q9NVF7 368 aa27.43■■□□□ 1.98
PKP3-210ENST00000533249 COL11A1P12107 1806 aaPredicted RBP27.42■■□□□ 1.98
PKP3-210ENST00000533249 MYCNP04198 464 aaPredicted RBP27.42■■□□□ 1.98
PKP3-210ENST00000533249 PRAMEF19Q5SWL8 479 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms