RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 GJD2Q9UKL4 321 aa26.19■■□□□ 1.78
NDUFS3-210ENST00000533105 RABGAP1Q9Y3P9 1069 aa26.19■■□□□ 1.78
NDUFS3-210ENST00000533105 TRIM6-TRIM34B2RNG4 842 aa26.18■■□□□ 1.78
NDUFS3-210ENST00000533105 INHAP05111 366 aa26.18■■□□□ 1.78
NDUFS3-210ENST00000533105 RASA1P20936 1047 aa26.18■■□□□ 1.78
NDUFS3-210ENST00000533105 MAPK4P31152 587 aa26.18■■□□□ 1.78
NDUFS3-210ENST00000533105 NAPBQ9H115 298 aa26.18■■□□□ 1.78
NDUFS3-210ENST00000533105 PORCNQ9H237 461 aa26.18■■□□□ 1.78
NDUFS3-210ENST00000533105 ROBO3Q96MS0 1386 aa26.18■■□□□ 1.78
NDUFS3-210ENST00000533105 RBBP6Q7Z6E9 1792 aaKnown RBP26.18■■□□□ 1.78
NDUFS3-210ENST00000533105 SPDYE16A6NNV3 312 aaPredicted RBP26.17■■□□□ 1.78
NDUFS3-210ENST00000533105 PRDM1O75626 825 aa26.17■■□□□ 1.78
NDUFS3-210ENST00000533105 CNMDO75829 334 aa26.17■■□□□ 1.78
NDUFS3-210ENST00000533105 LPAR1Q92633 364 aa26.17■■□□□ 1.78
NDUFS3-210ENST00000533105 RILPL2Q969X0 211 aa26.17■■□□□ 1.78
NDUFS3-210ENST00000533105 VCPKMTQ9H867 229 aa26.17■■□□□ 1.78
NDUFS3-210ENST00000533105 TNRC18O15417 2968 aaPredicted RBP26.16■■□□□ 1.78
NDUFS3-210ENST00000533105 BRCA2P51587 3418 aa26.16■■□□□ 1.78
NDUFS3-210ENST00000533105 RAD21O60216 631 aa26.16■■□□□ 1.78
NDUFS3-210ENST00000533105 COG2Q14746 738 aa26.16■■□□□ 1.78
NDUFS3-210ENST00000533105 WDR78Q5VTH9 848 aa26.16■■□□□ 1.78
NDUFS3-210ENST00000533105 ZNF444Q8N0Y2 327 aaPredicted RBP26.16■■□□□ 1.78
NDUFS3-210ENST00000533105 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.16■■□□□ 1.78
NDUFS3-210ENST00000533105 UNC93B1Q9H1C4 597 aa26.16■■□□□ 1.78
NDUFS3-210ENST00000533105 ZNF287Q9HBT7 754 aa26.16■■□□□ 1.78
NDUFS3-210ENST00000533105 BTBD7Q9P203 1132 aa26.16■■□□□ 1.78
NDUFS3-210ENST00000533105 CYP2B6P20813 491 aa26.15■■□□□ 1.78
NDUFS3-210ENST00000533105 CCNA1P78396 465 aa26.15■■□□□ 1.78
NDUFS3-210ENST00000533105 SAMD1Q6SPF0 538 aaPredicted RBP26.15■■□□□ 1.78
NDUFS3-210ENST00000533105 LBX2Q6XYB7 198 aa26.15■■□□□ 1.78
NDUFS3-210ENST00000533105 GPR142Q7Z601 462 aa26.15■■□□□ 1.78
NDUFS3-210ENST00000533105 PLEKHM2Q8IWE5 1019 aa26.15■■□□□ 1.78
NDUFS3-210ENST00000533105 NUDT12Q9BQG2 462 aa26.15■■□□□ 1.78
NDUFS3-210ENST00000533105 HOXC10Q9NYD6 342 aa26.15■■□□□ 1.78
NDUFS3-210ENST00000533105 DOCK3Q8IZD9 2030 aa26.15■■□□□ 1.78
NDUFS3-210ENST00000533105 FLOT1O75955 427 aa26.14■■□□□ 1.78
NDUFS3-210ENST00000533105 PLEKHH3Q7Z736 793 aa26.14■■□□□ 1.78
NDUFS3-210ENST00000533105 SOCS4Q8WXH5 440 aa26.14■■□□□ 1.78
NDUFS3-210ENST00000533105 HELLSQ9NRZ9 838 aa26.14■■□□□ 1.78
NDUFS3-210ENST00000533105 GJB1P08034 283 aa26.13■■□□□ 1.77
NDUFS3-210ENST00000533105 SLC3A2P08195 630 aaKnown RBP26.13■■□□□ 1.77
NDUFS3-210ENST00000533105 PPARAQ07869 468 aa26.13■■□□□ 1.77
NDUFS3-210ENST00000533105 NKX2-3Q8TAU0 364 aa26.13■■□□□ 1.77
NDUFS3-210ENST00000533105 FAM227BQ96M60 508 aa26.13■■□□□ 1.77
NDUFS3-210ENST00000533105 GOPCQ9HD26 462 aa26.13■■□□□ 1.77
NDUFS3-210ENST00000533105 WDR46O15213 610 aaKnown RBP26.12■■□□□ 1.77
NDUFS3-210ENST00000533105 PDE4BQ07343 736 aa26.12■■□□□ 1.77
NDUFS3-210ENST00000533105 VPS53Q5VIR6 699 aa26.12■■□□□ 1.77
NDUFS3-210ENST00000533105 A0A0D9SFI3 127 aa26.11■■□□□ 1.77
NDUFS3-210ENST00000533105 FOXP2O15409 715 aa26.11■■□□□ 1.77
NDUFS3-210ENST00000533105 HMGCRP04035 888 aa26.11■■□□□ 1.77
NDUFS3-210ENST00000533105 DSG3P32926 999 aa26.11■■□□□ 1.77
NDUFS3-210ENST00000533105 GJA8P48165 433 aa26.11■■□□□ 1.77
NDUFS3-210ENST00000533105 MCMDC2Q4G0Z9 681 aa26.11■■□□□ 1.77
NDUFS3-210ENST00000533105 SHISA4Q96DD7 197 aa26.11■■□□□ 1.77
NDUFS3-210ENST00000533105 NMIQ13287 307 aaPredicted RBP26.1■■□□□ 1.77
NDUFS3-210ENST00000533105 OSBPL3Q9H4L5 887 aa26.1■■□□□ 1.77
NDUFS3-210ENST00000533105 CLIP2Q9UDT6 1046 aa26.1■■□□□ 1.77
NDUFS3-210ENST00000533105 TSPY3P0CV98 308 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 TSPY8P0CW00 308 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 RGS2P41220 211 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 TRIM32Q13049 653 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 PLS1Q14651 629 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 FAM47AQ5JRC9 791 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 MORN1Q5T089 497 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 U2AF1L4Q8WU68 220 aaKnown RBP26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 TRIB2Q92519 343 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 ATG4CQ96DT6 458 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 NYAP2Q9P242 653 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 PDE4DIPQ5VU43 2346 aa26.09■■□□□ 1.77
NDUFS3-210ENST00000533105 CTDSPL2Q05D32 466 aa26.08■■□□□ 1.77
NDUFS3-210ENST00000533105 FAM83BQ5T0W9 1011 aa26.08■■□□□ 1.77
NDUFS3-210ENST00000533105 TICAM2Q86XR7 235 aa26.08■■□□□ 1.77
NDUFS3-210ENST00000533105 USP6NLQ92738 828 aa26.08■■□□□ 1.77
NDUFS3-210ENST00000533105 CEP95Q96GE4 821 aa26.08■■□□□ 1.77
NDUFS3-210ENST00000533105 DEFB118Q96PH6 123 aa26.08■■□□□ 1.77
NDUFS3-210ENST00000533105 IVNS1ABPQ9Y6Y0 642 aa26.08■■□□□ 1.77
NDUFS3-210ENST00000533105 PLXNB2O15031 1838 aa26.07■■□□□ 1.76
NDUFS3-210ENST00000533105 IGKV6D-41A0A0C4DH26 115 aa26.07■■□□□ 1.76
NDUFS3-210ENST00000533105 XRCC5P13010 732 aaKnown RBP26.07■■□□□ 1.76
NDUFS3-210ENST00000533105 ZKSCAN1P17029 563 aaPredicted RBP26.07■■□□□ 1.76
NDUFS3-210ENST00000533105 TFAP4Q01664 338 aa26.07■■□□□ 1.76
NDUFS3-210ENST00000533105 MB21D1Q8N884 522 aa26.07■■□□□ 1.76
NDUFS3-210ENST00000533105 MOV10L1Q9BXT6 1211 aaKnown RBP26.07■■□□□ 1.76
NDUFS3-210ENST00000533105 SPATC1LQ9H0A9 340 aa26.07■■□□□ 1.76
NDUFS3-210ENST00000533105 FBXO28Q9NVF7 368 aa26.07■■□□□ 1.76
NDUFS3-210ENST00000533105 F5H6K3 240 aa26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 SGPL1O95470 568 aa26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 TFRCP02786 760 aaKnown RBP26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 SDSP20132 328 aa26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 PTPREP23469 700 aa26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 KLRC3Q07444 240 aa26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 MAP2K5Q13163 448 aa26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 ZNF589Q86UQ0 364 aaPredicted RBP26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 NEDD1Q8NHV4 660 aa26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 NUP88Q99567 741 aaPredicted RBP26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 APBA2Q99767 749 aa26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 INCENPQ9NQS7 918 aa26.06■■□□□ 1.76
NDUFS3-210ENST00000533105 MTMR4Q9NYA4 1195 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms