RNA–Protein interactions for RNA: ENST00000532465.1

LMNB2-205, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-205ENST00000532465 EEF2P13639 858 aaKnown RBP22.34■■□□□ 1.17
LMNB2-205ENST00000532465 MAPK4P31152 587 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 ATP2B2Q01814 1243 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 LBX2Q6XYB7 198 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 CHD1LQ86WJ1 897 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 SPICE1Q8N0Z3 855 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 SHISA4Q96DD7 197 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.34■■□□□ 1.17
LMNB2-205ENST00000532465 TANGO6Q9C0B7 1094 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 RNF208Q9H0X6 261 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 UNC93B1Q9H1C4 597 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 VCPKMTQ9H867 229 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 MKNK2Q9HBH9 465 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 BTBD7Q9P203 1132 aa22.34■■□□□ 1.17
LMNB2-205ENST00000532465 MKI67P46013 3256 aaKnown RBP22.33■■□□□ 1.17
LMNB2-205ENST00000532465 SH2D4AQ9H788 454 aa22.33■■□□□ 1.17
LMNB2-205ENST00000532465 KANSL2Q9H9L4 492 aa22.33■■□□□ 1.17
LMNB2-205ENST00000532465 GREB1LQ9C091 1923 aaPredicted RBP22.33■■□□□ 1.16
LMNB2-205ENST00000532465 IRX6P78412 446 aaPredicted RBP22.32■■□□□ 1.16
LMNB2-205ENST00000532465 NUCB1Q02818 461 aa22.32■■□□□ 1.16
LMNB2-205ENST00000532465 GPR142Q7Z601 462 aa22.32■■□□□ 1.16
LMNB2-205ENST00000532465 CCAR1Q8IX12 1150 aaKnown RBP22.32■■□□□ 1.16
LMNB2-205ENST00000532465 LPAR1Q92633 364 aa22.32■■□□□ 1.16
LMNB2-205ENST00000532465 NACAP1Q9BZK3 213 aa22.32■■□□□ 1.16
LMNB2-205ENST00000532465 NAPBQ9H115 298 aa22.32■■□□□ 1.16
LMNB2-205ENST00000532465 FOXP2O15409 715 aa22.31■■□□□ 1.16
LMNB2-205ENST00000532465 PRDM1O75626 825 aa22.31■■□□□ 1.16
LMNB2-205ENST00000532465 GJB1P08034 283 aa22.31■■□□□ 1.16
LMNB2-205ENST00000532465 CYP2B6P20813 491 aa22.31■■□□□ 1.16
LMNB2-205ENST00000532465 COG2Q14746 738 aa22.31■■□□□ 1.16
LMNB2-205ENST00000532465 NUDT12Q9BQG2 462 aa22.31■■□□□ 1.16
LMNB2-205ENST00000532465 RLFQ13129 1914 aa22.31■■□□□ 1.16
LMNB2-205ENST00000532465 GJA8P48165 433 aa22.3■■□□□ 1.16
LMNB2-205ENST00000532465 CCNA1P78396 465 aa22.3■■□□□ 1.16
LMNB2-205ENST00000532465 PLEKHH3Q7Z736 793 aa22.3■■□□□ 1.16
LMNB2-205ENST00000532465 PLEKHM2Q8IWE5 1019 aa22.3■■□□□ 1.16
LMNB2-205ENST00000532465 SOCS4Q8WXH5 440 aa22.3■■□□□ 1.16
LMNB2-205ENST00000532465 CWC22Q9HCG8 908 aaKnown RBP22.3■■□□□ 1.16
LMNB2-205ENST00000532465 TRIM6-TRIM34B2RNG4 842 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 WDR46O15213 610 aaKnown RBP22.29■■□□□ 1.16
LMNB2-205ENST00000532465 HMGCRP04035 888 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 PPARAQ07869 468 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 TRIM32Q13049 653 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 MORN1Q5T089 497 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 VPS53Q5VIR6 699 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 WDR78Q5VTH9 848 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 NKX2-3Q8TAU0 364 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 TRIB2Q92519 343 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 FAM227BQ96M60 508 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 HOXC10Q9NYD6 342 aa22.29■■□□□ 1.16
LMNB2-205ENST00000532465 A0A0D9SFI3 127 aa22.28■■□□□ 1.16
LMNB2-205ENST00000532465 RAD21O60216 631 aa22.28■■□□□ 1.16
LMNB2-205ENST00000532465 FLOT1O75955 427 aa22.28■■□□□ 1.16
LMNB2-205ENST00000532465 DSG3P32926 999 aa22.28■■□□□ 1.16
LMNB2-205ENST00000532465 ZNF444Q8N0Y2 327 aaPredicted RBP22.28■■□□□ 1.16
LMNB2-205ENST00000532465 U2AF1L4Q8WU68 220 aaKnown RBP22.28■■□□□ 1.16
LMNB2-205ENST00000532465 USP6NLQ92738 828 aa22.28■■□□□ 1.16
LMNB2-205ENST00000532465 RILPL2Q969X0 211 aa22.28■■□□□ 1.16
LMNB2-205ENST00000532465 ATG4CQ96DT6 458 aa22.28■■□□□ 1.16
LMNB2-205ENST00000532465 HELLSQ9NRZ9 838 aa22.28■■□□□ 1.16
LMNB2-205ENST00000532465 A0A0G2JMZ2 1700 aa22.28■■□□□ 1.16
LMNB2-205ENST00000532465 IGKV6D-41A0A0C4DH26 115 aa22.27■■□□□ 1.16
LMNB2-205ENST00000532465 PRPF38BQ5VTL8 546 aaKnown RBP22.27■■□□□ 1.16
LMNB2-205ENST00000532465 SAMD1Q6SPF0 538 aaPredicted RBP22.27■■□□□ 1.16
LMNB2-205ENST00000532465 OSBPL3Q9H4L5 887 aa22.27■■□□□ 1.16
LMNB2-205ENST00000532465 ZNF287Q9HBT7 754 aa22.27■■□□□ 1.16
LMNB2-205ENST00000532465 GOPCQ9HD26 462 aa22.27■■□□□ 1.16
LMNB2-205ENST00000532465 NYAP2Q9P242 653 aa22.27■■□□□ 1.16
LMNB2-205ENST00000532465 RGS2P41220 211 aa22.26■■□□□ 1.15
LMNB2-205ENST00000532465 NMIQ13287 307 aaPredicted RBP22.26■■□□□ 1.15
LMNB2-205ENST00000532465 DEFB118Q96PH6 123 aa22.26■■□□□ 1.15
LMNB2-205ENST00000532465 MOV10L1Q9BXT6 1211 aaKnown RBP22.26■■□□□ 1.15
LMNB2-205ENST00000532465 PAK6Q9NQU5 681 aaPredicted RBP22.26■■□□□ 1.15
LMNB2-205ENST00000532465 FBXO28Q9NVF7 368 aa22.26■■□□□ 1.15
LMNB2-205ENST00000532465 PARP14Q460N5 1801 aa22.26■■□□□ 1.15
LMNB2-205ENST00000532465 SGPL1O95470 568 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 XRCC5P13010 732 aaKnown RBP22.25■■□□□ 1.15
LMNB2-205ENST00000532465 PTPREP23469 700 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 CTDSPL2Q05D32 466 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 PDE4BQ07343 736 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 MAP2K5Q13163 448 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 CCL14Q16627 93 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 MCMDC2Q4G0Z9 681 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 FAM47AQ5JRC9 791 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 FAM83BQ5T0W9 1011 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 CEP95Q96GE4 821 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 APBA2Q99767 749 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 SPATC1LQ9H0A9 340 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.25■■□□□ 1.159e-6■■■■■ 32.4
LMNB2-205ENST00000532465 CLIP2Q9UDT6 1046 aa22.25■■□□□ 1.15
LMNB2-205ENST00000532465 SLC3A2P08195 630 aaKnown RBP22.24■■□□□ 1.15
LMNB2-205ENST00000532465 ZKSCAN1P17029 563 aaPredicted RBP22.24■■□□□ 1.15
LMNB2-205ENST00000532465 PLS1Q14651 629 aa22.24■■□□□ 1.15
LMNB2-205ENST00000532465 ZNF589Q86UQ0 364 aaPredicted RBP22.24■■□□□ 1.15
LMNB2-205ENST00000532465 MB21D1Q8N884 522 aa22.24■■□□□ 1.15
LMNB2-205ENST00000532465 NUP88Q99567 741 aaPredicted RBP22.24■■□□□ 1.15
LMNB2-205ENST00000532465 INCENPQ9NQS7 918 aa22.24■■□□□ 1.15
LMNB2-205ENST00000532465 SLC15A5A6NIM6 579 aa22.23■■□□□ 1.15
LMNB2-205ENST00000532465 TSPY3P0CV98 308 aa22.23■■□□□ 1.15
LMNB2-205ENST00000532465 TSPY8P0CW00 308 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms