RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 USP17L24Q0WX57 530 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 STAG1Q8WVM7 1258 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 ARHGEF10LQ9HCE6 1279 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 RBPJLQ9UBG7 517 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 PNMA3Q9UL41 463 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 GCLCP48506 637 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-220ENST00000532375 HERVK_113P62684 666 aa16.54■□□□□ 0.24
TSPAN4-220ENST00000532375 AKNAD1Q5T1N1 836 aa16.54■□□□□ 0.24
TSPAN4-220ENST00000532375 RUFY2Q8WXA3 655 aa16.54■□□□□ 0.24
TSPAN4-220ENST00000532375 LPAR1Q92633 364 aa16.54■□□□□ 0.24
TSPAN4-220ENST00000532375 TRIM47Q96LD4 638 aa16.54■□□□□ 0.24
TSPAN4-220ENST00000532375 RPAP3Q9H6T3 665 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-220ENST00000532375 TXNRD2Q9NNW7 524 aa16.54■□□□□ 0.24
TSPAN4-220ENST00000532375 MORF4L1Q9UBU8 362 aa16.54■□□□□ 0.24
TSPAN4-220ENST00000532375 HTTP42858 3142 aa16.54■□□□□ 0.24
TSPAN4-220ENST00000532375 ZNF213O14771 459 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 NMT2O60551 498 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 CNMDO75829 334 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 TSPY3P0CV98 308 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 TSPY8P0CW00 308 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 FAM110CQ1W6H9 321 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 Q3C1V9 767 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 LBX2Q6XYB7 198 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 ANKRD13CQ8N6S4 541 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 SMCR8Q8TEV9 937 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 MAP4K1Q92918 833 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 ESYT1Q9BSJ8 1104 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 CLIP2Q9UDT6 1046 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 TRIM17Q9Y577 477 aa16.53■□□□□ 0.24
TSPAN4-220ENST00000532375 NEDD4P46934 1319 aa16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 F5H6K3 240 aa16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 PCP11498 1178 aaKnown RBP16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 ATP2B2Q01814 1243 aa16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 KLRC3Q07444 240 aa16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 PKN2Q16513 984 aaKnown RBP16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 SPICE1Q8N0Z3 855 aa16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 LSG1Q9H089 658 aaKnown RBP16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 EFCC1Q9HA90 598 aa16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 TCP11L1Q9NUJ3 509 aa16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 TAF6LQ9Y6J9 622 aa16.52■□□□□ 0.24
TSPAN4-220ENST00000532375 SPDYE16A6NNV3 312 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 RANBP6O60518 1105 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 TTLL1O95922 423 aa16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 PSMC4P43686 418 aa16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 RCSD1Q6JBY9 416 aa16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 MFSD6Q6ZSS7 791 aa16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 ABHD8Q96I13 439 aa16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 SYNPO2Q9UMS6 1093 aa16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 ADAMTS5Q9UNA0 930 aa16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 PTPN22Q9Y2R2 807 aa16.51■□□□□ 0.23
TSPAN4-220ENST00000532375 TSPY2A6NKD2 308 aa16.5■□□□□ 0.23
TSPAN4-220ENST00000532375 WDR46O15213 610 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-220ENST00000532375 NDUFB10O96000 172 aa16.5■□□□□ 0.23
TSPAN4-220ENST00000532375 CYP21A2P08686 494 aa16.5■□□□□ 0.23
TSPAN4-220ENST00000532375 COG2Q14746 738 aa16.5■□□□□ 0.23
TSPAN4-220ENST00000532375 FBXO46Q6PJ61 603 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-220ENST00000532375 FBXO28Q9NVF7 368 aa16.5■□□□□ 0.23
TSPAN4-220ENST00000532375 BTBD7Q9P203 1132 aa16.5■□□□□ 0.23
TSPAN4-220ENST00000532375 A0A0G2JMZ2 1700 aa16.5■□□□□ 0.23
TSPAN4-220ENST00000532375 GNRH1P01148 92 aa16.49■□□□□ 0.23
TSPAN4-220ENST00000532375 DSG3P32926 999 aa16.49■□□□□ 0.23
TSPAN4-220ENST00000532375 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-220ENST00000532375 RRP12Q5JTH9 1297 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-220ENST00000532375 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-220ENST00000532375 RNF41Q9H4P4 317 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-220ENST00000532375 GOPCQ9HD26 462 aa16.49■□□□□ 0.23
TSPAN4-220ENST00000532375 RABGAP1Q9Y3P9 1069 aa16.49■□□□□ 0.23
TSPAN4-220ENST00000532375 PLXNB2O15031 1838 aa16.49■□□□□ 0.23
TSPAN4-220ENST00000532375 COL11A1P12107 1806 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 ECM2O94769 699 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 ERVK-9P63128 1117 aa16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 ERVK-24P63145 666 aa16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 FAM83BQ5T0W9 1011 aa16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 LRRC47Q8N1G4 583 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 GMCL1P1Q8NEA9 526 aa16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 GPRC5AQ8NFJ5 357 aa16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 GTF3C2Q8WUA4 911 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 HOXC10Q9NYD6 342 aa16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 ZSWIM5Q9P217 1185 aa16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 SRRDQ9UH36 339 aa16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 GJD2Q9UKL4 321 aa16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 RBM8AQ9Y5S9 174 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-220ENST00000532375 MYPNQ86TC9 1320 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 B4E1Z4 1266 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 CDC45O75419 566 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 NT5C2P49902 561 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 KIF22Q14807 665 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 ARHGEF6Q15052 776 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 NECTIN1Q15223 517 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 STOX1Q6ZVD7 989 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 REPS2Q8NFH8 660 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 ANKS1AQ92625 1134 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 ATG4CQ96DT6 458 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 TMEM47Q9BQJ4 181 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 TANGO6Q9C0B7 1094 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms