RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PLIN4Q96Q06 1357 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 ZNF213O14771 459 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 SGSM2O43147 1006 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 TSPY3P0CV98 308 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 TSPY8P0CW00 308 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 HAND2P61296 217 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 HERVK_113P62684 666 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 LPAR1Q92633 364 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 MKL1Q969V6 931 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 ARHGAP39Q9C0H5 1083 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 NBPF3Q9H094 633 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 RPAP3Q9H6T3 665 aaPredicted RBP15.03■□□□□ -0
CCDC90B-216ENST00000529856 MTMR4Q9NYA4 1195 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 CLIP2Q9UDT6 1046 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 CTNNA3Q9UI47 895 aa15.03■□□□□ -0
CCDC90B-216ENST00000529856 TSPY2A6NKD2 308 aa15.02■□□□□ -0
CCDC90B-216ENST00000529856 RANBP6O60518 1105 aaKnown RBP15.02■□□□□ -0
CCDC90B-216ENST00000529856 PCP11498 1178 aaKnown RBP15.02■□□□□ -0
CCDC90B-216ENST00000529856 CTGFP29279 349 aa15.02■□□□□ -0
CCDC90B-216ENST00000529856 PSMC4P43686 418 aa15.02■□□□□ -0
CCDC90B-216ENST00000529856 FAM110CQ1W6H9 321 aa15.02■□□□□ -0
CCDC90B-216ENST00000529856 AKNAD1Q5T1N1 836 aa15.02■□□□□ -0
CCDC90B-216ENST00000529856 FBXO46Q6PJ61 603 aaPredicted RBP15.02■□□□□ -0
CCDC90B-216ENST00000529856 MFSD6Q6ZSS7 791 aa15.02■□□□□ -0
CCDC90B-216ENST00000529856 STAG1Q8WVM7 1258 aa15.02■□□□□ -0
CCDC90B-216ENST00000529856 CEP95Q96GE4 821 aa15.02■□□□□ -0
CCDC90B-216ENST00000529856 ABHD8Q96I13 439 aa15.02■□□□□ -0
CCDC90B-216ENST00000529856 TTLL1O95922 423 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 GNRH1P01148 92 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 PTH1RQ03431 593 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 POTEEQ6S8J3 1075 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 TBC1D10CQ8IV04 446 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 SPICE1Q8N0Z3 855 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 GTF3C2Q8WUA4 911 aaPredicted RBP15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 TRIM47Q96LD4 638 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 GOPCQ9HD26 462 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 IL17RBQ9NRM6 502 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 TOMM22Q9NS69 142 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 RBPJLQ9UBG7 517 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 MORF4L1Q9UBU8 362 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 SYNPO2Q9UMS6 1093 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 PTPN22Q9Y2R2 807 aa15.01□□□□□ -0.01
CCDC90B-216ENST00000529856 WDR46O15213 610 aaKnown RBP15□□□□□ -0.01
CCDC90B-216ENST00000529856 ECM2O94769 699 aaPredicted RBP15□□□□□ -0.01
CCDC90B-216ENST00000529856 FMNL1O95466 1100 aaPredicted RBP15□□□□□ -0.01
CCDC90B-216ENST00000529856 FCGRTP55899 365 aa15□□□□□ -0.01
CCDC90B-216ENST00000529856 COG2Q14746 738 aa15□□□□□ -0.01
CCDC90B-216ENST00000529856 IMMTQ16891 758 aaKnown RBP15□□□□□ -0.01
CCDC90B-216ENST00000529856 RRP12Q5JTH9 1297 aaKnown RBP15□□□□□ -0.01
CCDC90B-216ENST00000529856 PPP4R3BQ5MIZ7 849 aa15□□□□□ -0.01
CCDC90B-216ENST00000529856 LBX2Q6XYB7 198 aa15□□□□□ -0.01
CCDC90B-216ENST00000529856 GPRC5AQ8NFJ5 357 aa15□□□□□ -0.01
CCDC90B-216ENST00000529856 RNF41Q9H4P4 317 aaPredicted RBP15□□□□□ -0.01
CCDC90B-216ENST00000529856 TXNRD2Q9NNW7 524 aa15□□□□□ -0.01
CCDC90B-216ENST00000529856 HOXC10Q9NYD6 342 aa15□□□□□ -0.01
CCDC90B-216ENST00000529856 ZSWIM8A7E2V4 1837 aa15□□□□□ -0.01
CCDC90B-216ENST00000529856 MYH4Q9Y623 1939 aa15□□□□□ -0.01
CCDC90B-216ENST00000529856 F5H6K3 240 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 NMT2O60551 498 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 PEX10O60683 326 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 HOXD10P28358 340 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 NOVP48745 357 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 PRMT2P55345 433 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 KLRC3Q07444 240 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 Q3C1V9 767 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 TANGO6Q9C0B7 1094 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 TCP11L1Q9NUJ3 509 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 MGAMO43451 1857 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 LAMA4Q16363 1823 aa14.99□□□□□ -0.01
CCDC90B-216ENST00000529856 SPDYE16A6NNV3 312 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 RAD21O60216 631 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 CNMDO75829 334 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 NDUFB10O96000 172 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 DSG3P32926 999 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 NT5C2P49902 561 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 ERVK-9P63128 1117 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 ERVK-24P63145 666 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 GMCL1P1Q8NEA9 526 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 NKX2-3Q8TAU0 364 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 MAP4K1Q92918 833 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 ESYT1Q9BSJ8 1104 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 SRRDQ9UH36 339 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 HPS5Q9UPZ3 1129 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 RABGAP1Q9Y3P9 1069 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 U3KPZ7 1027 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 RLFQ13129 1914 aa14.98□□□□□ -0.01
CCDC90B-216ENST00000529856 FLOT1O75955 427 aa14.97□□□□□ -0.01
CCDC90B-216ENST00000529856 FAM83BQ5T0W9 1011 aa14.97□□□□□ -0.01
CCDC90B-216ENST00000529856 IFFO2Q5TF58 517 aa14.97□□□□□ -0.01
CCDC90B-216ENST00000529856 LRRC47Q8N1G4 583 aaKnown RBP14.97□□□□□ -0.01
CCDC90B-216ENST00000529856 ESR2Q92731 530 aa14.97□□□□□ -0.01
CCDC90B-216ENST00000529856 PAGR1Q9BTK6 254 aa14.97□□□□□ -0.01
CCDC90B-216ENST00000529856 STX8Q9UNK0 236 aa14.97□□□□□ -0.01
CCDC90B-216ENST00000529856 NEDD4P46934 1319 aa14.96□□□□□ -0.01
CCDC90B-216ENST00000529856 MYPNQ86TC9 1320 aa14.96□□□□□ -0.01
CCDC90B-216ENST00000529856 TNPO2O14787 897 aaKnown RBP14.96□□□□□ -0.01
CCDC90B-216ENST00000529856 KCNA4P22459 653 aa14.96□□□□□ -0.01
CCDC90B-216ENST00000529856 SLFN13Q68D06 897 aa14.96□□□□□ -0.01
CCDC90B-216ENST00000529856 KIAA1211Q6ZU35 1233 aa14.96□□□□□ -0.01
CCDC90B-216ENST00000529856 NUP88Q99567 741 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms