RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	DDX11	Q96FC9	970 aa		7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	LRRC2	Q9BYS8	371 aa		7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	NAT10	Q9H0A0	1025 aa	Known RBP	7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	FOXP1	Q9H334	677 aa	Predicted RBP	7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	SH3GLB2	Q9NR46	395 aa		7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	PIM2	Q9P1W9	311 aa		7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	BCCIP	Q9P287	314 aa	Known RBP eCLIP	7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	FAM198A	Q9UFP1	575 aa		7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	POLL	Q9UGP5	575 aa		7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	SEC63	Q9UGP8	760 aa	Known RBP	7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	SYNPO2	Q9UMS6	1093 aa		7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	NEDD4	P46934	1319 aa		7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	IRS2	Q9Y4H2	1338 aa		7.23	□□□□□ -1.25
PABPC4-222	ENST00000527718	DOCK2	Q92608	1830 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	TIAM2	Q8IVF5	1701 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	PPIP5K2	O43314	1243 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	KIN	O60870	393 aa	Known RBP	7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	LARGE1	O95461	756 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	CCDC192	P0DO97	292 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	TOP1	P11387	765 aa	Known RBP	7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	TRAPPC10	P48553	1259 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	TNNI2	P48788	182 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	RBM5	P52756	815 aa	Known RBP eCLIP	7.22	□□□□□ -1.25	9e-10	■■■□□ 19.1
PABPC4-222	ENST00000527718	DYNLL1	P63167	89 aa	Known RBP	7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	TPM4	P67936	248 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	DHX8	Q14562	1220 aa	Known RBP	7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	RCSD1	Q6JBY9	416 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	C16orf86	Q6ZW13	317 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	SAMD7	Q7Z3H4	446 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	FOXP4	Q8IVH2	680 aa	Predicted RBP	7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	NIM1K	Q8IY84	436 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	TGFBRAP1	Q8WUH2	860 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	ANKS1A	Q92625	1134 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	DDX12P	Q92771	950 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	TRIM44	Q96DX7	344 aa	Predicted RBP	7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	ZDHHC15	Q96MV8	337 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	NAP1L4	Q99733	375 aa	Known RBP	7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	SLC26A6	Q9BXS9	759 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	EHD4	Q9H223	541 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	SH2D4A	Q9H788	454 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	POLR3E	Q9NVU0	708 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	PI4KB	Q9UBF8	816 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	SERPINB13	Q9UIV8	391 aa		7.22	□□□□□ -1.25
PABPC4-222	ENST00000527718	NRXN2	Q9P2S2	1712 aa		7.21	□□□□□ -1.25
PABPC4-222	ENST00000527718	AKAP11	Q9UKA4	1901 aa		7.21	□□□□□ -1.25
PABPC4-222	ENST00000527718	FOXP2	O15409	715 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	PRPF3	O43395	683 aa	Known RBP	7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	PRKAB2	O43741	272 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	ECE2	O60344	883 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	ENTPD3	O75355	529 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	RPS12	P25398	132 aa	Known RBP	7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	GNA11	P29992	359 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	ME1	P48163	572 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	PRSS12	P56730	875 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	ANTXR2	P58335	489 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	TFAP4	Q01664	338 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	DNM1	Q05193	864 aa	Known RBP	7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	ORC2	Q13416	577 aa	Predicted RBP	7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	TNFAIP1	Q13829	316 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	MAP3K11	Q16584	847 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	UVSSA	Q2YD98	709 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	DALRD3	Q5D0E6	543 aa	Known RBP	7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	GPATCH4	Q5T3I0	446 aa	Known RBP	7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	KANK3	Q6NY19	840 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	SASS6	Q6UVJ0	657 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	LRSAM1	Q6UWE0	723 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	CYB5R4	Q7L1T6	521 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	CDC37L1	Q7L3B6	337 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	CHST3	Q7LGC8	479 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	LARGE2	Q8N3Y3	721 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	AGBL3	Q8NEM8	1001 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	GTPBP4	Q9BZE4	634 aa	Known RBP	7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	GZF1	Q9H116	711 aa	Predicted RBP	7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	NUP62CL	Q9H1M0	184 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	TSPY26P	Q9H489	355 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	CABP5	Q9NP86	173 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	GINM1	Q9NU53	330 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	USP40	Q9NVE5	1235 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	FAM13B	Q9NYF5	915 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	RTEL1	Q9NZ71	1219 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	PNMA2	Q9UL42	364 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	ZDHHC9	Q9Y397	364 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	CD2AP	Q9Y5K6	639 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	FLT1	P17948	1338 aa		7.21	□□□□□ -1.26
PABPC4-222	ENST00000527718	C10orf71	Q711Q0	1435 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	COL1A1	P02452	1464 aa	Predicted RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718		A0A1W2PQ27	194 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718		A0A1W2PQ64	194 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718		A0A1W2PQD8	194 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	GOLGA6L6	A8MZA4	724 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	C3orf80	F5H4A9	247 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	JAK2	O60674	1132 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	PPP6R2	O75170	966 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	TTLL1	O95922	423 aa		7.2	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms