RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 ELF2Q15723 593 aa23.23■■□□□ 1.31
SMIM3-201ENST00000526627 SPECC1LQ69YQ0 1117 aa23.23■■□□□ 1.31
SMIM3-201ENST00000526627 APTXQ7Z2E3 356 aaKnown RBP23.23■■□□□ 1.31
SMIM3-201ENST00000526627 CTCFLQ8NI51 663 aaPredicted RBP23.23■■□□□ 1.31
SMIM3-201ENST00000526627 SETDB2Q96T68 719 aa23.23■■□□□ 1.31
SMIM3-201ENST00000526627 BRMS1Q9HCU9 246 aa23.23■■□□□ 1.31
SMIM3-201ENST00000526627 ARPP21Q9UBL0 812 aaPredicted RBP23.22■■□□□ 1.31
SMIM3-201ENST00000526627 BAZ2BQ9UIF8 2168 aaKnown RBP23.22■■□□□ 1.31
SMIM3-201ENST00000526627 ARHGAP6O43182 974 aa23.22■■□□□ 1.31
SMIM3-201ENST00000526627 RPS6KA4O75676 772 aa23.22■■□□□ 1.31
SMIM3-201ENST00000526627 SCG2P13521 617 aa23.22■■□□□ 1.31
SMIM3-201ENST00000526627 PTGDRQ13258 359 aa23.22■■□□□ 1.31
SMIM3-201ENST00000526627 KMT5BQ4FZB7 885 aa23.22■■□□□ 1.31
SMIM3-201ENST00000526627 RC3H1Q5TC82 1133 aaKnown RBP23.22■■□□□ 1.31
SMIM3-201ENST00000526627 NBPF5PQ86XG9 351 aaPredicted RBP23.22■■□□□ 1.31
SMIM3-201ENST00000526627 PRDM10Q9NQV6 1147 aa23.22■■□□□ 1.31
SMIM3-201ENST00000526627 PHLPP2Q6ZVD8 1323 aa23.22■■□□□ 1.31
SMIM3-201ENST00000526627 CCDC88AQ3V6T2 1871 aa23.21■■□□□ 1.31
SMIM3-201ENST00000526627 CT47A1Q5JQC4 288 aaPredicted RBP23.21■■□□□ 1.31
SMIM3-201ENST00000526627 HOMER1Q86YM7 354 aa23.21■■□□□ 1.31
SMIM3-201ENST00000526627 LTBP4Q8N2S1 1624 aa23.21■■□□□ 1.31
SMIM3-201ENST00000526627 JAG2Q9Y219 1238 aa23.21■■□□□ 1.31
SMIM3-201ENST00000526627 A0A1B0GTH6 734 aa23.21■■□□□ 1.31
SMIM3-201ENST00000526627 PFKFB3Q16875 520 aaPredicted RBP23.21■■□□□ 1.31
SMIM3-201ENST00000526627 ZNF397Q8NF99 534 aaPredicted RBP23.21■■□□□ 1.31
SMIM3-201ENST00000526627 ZBTB22O15209 634 aa23.2■■□□□ 1.3
SMIM3-201ENST00000526627 IL17AQ16552 155 aa23.2■■□□□ 1.3
SMIM3-201ENST00000526627 AMIGO3Q86WK7 504 aa23.2■■□□□ 1.3
SMIM3-201ENST00000526627 BAG1Q99933 345 aaPredicted RBP23.2■■□□□ 1.3
SMIM3-201ENST00000526627 DNAI1Q9UI46 699 aa23.2■■□□□ 1.3
SMIM3-201ENST00000526627 PPP2R2CQ9Y2T4 447 aa23.2■■□□□ 1.3
SMIM3-201ENST00000526627 VWA3AA6NCI4 1184 aa23.2■■□□□ 1.3
SMIM3-201ENST00000526627 ZSCAN20P17040 1043 aaPredicted RBP23.2■■□□□ 1.3
SMIM3-201ENST00000526627 E2F4Q16254 413 aa23.2■■□□□ 1.3
SMIM3-201ENST00000526627 SPATA1Q5VX52 437 aa23.2■■□□□ 1.3
SMIM3-201ENST00000526627 MKRN1Q9UHC7 482 aaKnown RBP23.2■■□□□ 1.3
SMIM3-201ENST00000526627 DDX41Q9UJV9 622 aaKnown RBP23.2■■□□□ 1.3
SMIM3-201ENST00000526627 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.2■■□□□ 1.3
SMIM3-201ENST00000526627 PPP1R3GB7ZBB8 358 aa23.19■■□□□ 1.3
SMIM3-201ENST00000526627 USP17L8P0C7I0 530 aa23.19■■□□□ 1.3
SMIM3-201ENST00000526627 ADKP55263 362 aaKnown RBP23.19■■□□□ 1.3
SMIM3-201ENST00000526627 PIK3AP1Q6ZUJ8 805 aa23.19■■□□□ 1.3
SMIM3-201ENST00000526627 GSDMAQ96QA5 445 aa23.19■■□□□ 1.3
SMIM3-201ENST00000526627 OGFRQ9NZT2 677 aa23.19■■□□□ 1.3
SMIM3-201ENST00000526627 XDHP47989 1333 aa23.19■■□□□ 1.3
SMIM3-201ENST00000526627 NLRP5P59047 1200 aa23.19■■□□□ 1.3
SMIM3-201ENST00000526627 FBXO38Q6PIJ6 1188 aa23.19■■□□□ 1.3
SMIM3-201ENST00000526627 SLC51AQ86UW1 340 aa23.19■■□□□ 1.3
SMIM3-201ENST00000526627 CCDC34Q96HJ3 373 aa23.19■■□□□ 1.3
SMIM3-201ENST00000526627 TSPY2A6NKD2 308 aa23.18■■□□□ 1.3
SMIM3-201ENST00000526627 STX10O60499 249 aa23.18■■□□□ 1.3
SMIM3-201ENST00000526627 TRAPPC10P48553 1259 aa23.18■■□□□ 1.3
SMIM3-201ENST00000526627 TNRC6CQ9HCJ0 1690 aaKnown RBP23.18■■□□□ 1.3
SMIM3-201ENST00000526627 TEX33O43247 280 aa23.17■■□□□ 1.3
SMIM3-201ENST00000526627 CDKAL1Q5VV42 579 aa23.17■■□□□ 1.3
SMIM3-201ENST00000526627 KLHL10Q6JEL2 608 aa23.17■■□□□ 1.3
SMIM3-201ENST00000526627 TMED8Q6PL24 325 aaPredicted RBP23.17■■□□□ 1.3
SMIM3-201ENST00000526627 SMYD4Q8IYR2 804 aaPredicted RBP23.17■■□□□ 1.3
SMIM3-201ENST00000526627 IL17RBQ9NRM6 502 aa23.17■■□□□ 1.3
SMIM3-201ENST00000526627 MCM9Q9NXL9 1143 aa23.17■■□□□ 1.3
SMIM3-201ENST00000526627 SYNRGQ9UMZ2 1314 aa23.17■■□□□ 1.3
SMIM3-201ENST00000526627 GNPATO15228 680 aa23.17■■□□□ 1.3
SMIM3-201ENST00000526627 ZSCAN12O43309 604 aa23.17■■□□□ 1.3
SMIM3-201ENST00000526627 STX17P56962 302 aa23.17■■□□□ 1.3
SMIM3-201ENST00000526627 TPTE2Q6XPS3 522 aa23.17■■□□□ 1.3
SMIM3-201ENST00000526627 SLC4A8Q2Y0W8 1093 aa23.16■■□□□ 1.3
SMIM3-201ENST00000526627 C12orf60Q5U649 245 aa23.16■■□□□ 1.3
SMIM3-201ENST00000526627 PDXDC2PQ6P474 469 aa23.16■■□□□ 1.3
SMIM3-201ENST00000526627 TOGARAM2Q6ZUX3 1019 aa23.16■■□□□ 1.3
SMIM3-201ENST00000526627 MTRQ99707 1265 aa23.16■■□□□ 1.3
SMIM3-201ENST00000526627 SBF2Q86WG5 1849 aa23.16■■□□□ 1.3
SMIM3-201ENST00000526627 ZPR1O75312 459 aa23.16■■□□□ 1.3
SMIM3-201ENST00000526627 PBX1P40424 430 aa23.16■■□□□ 1.3
SMIM3-201ENST00000526627 ERCC6LQ2NKX8 1250 aa23.16■■□□□ 1.3
SMIM3-201ENST00000526627 STAMQ92783 540 aa23.16■■□□□ 1.3
SMIM3-201ENST00000526627 DZIP1Q86YF9 867 aaKnown RBP23.15■■□□□ 1.3
SMIM3-201ENST00000526627 C4orf32Q8N8J7 132 aa23.15■■□□□ 1.3
SMIM3-201ENST00000526627 ADD3Q9UEY8 706 aaKnown RBP23.15■■□□□ 1.3
SMIM3-201ENST00000526627 BTAF1O14981 1849 aa23.15■■□□□ 1.3
SMIM3-201ENST00000526627 MCM7P33993 719 aa23.15■■□□□ 1.3
SMIM3-201ENST00000526627 TFAP4Q01664 338 aa23.15■■□□□ 1.3
SMIM3-201ENST00000526627 ANKS1AQ92625 1134 aa23.15■■□□□ 1.3
SMIM3-201ENST00000526627 FAM205AQ6ZU69 1335 aa23.14■■□□□ 1.3
SMIM3-201ENST00000526627 KIF5BP33176 963 aa23.14■■□□□ 1.3
SMIM3-201ENST00000526627 SPTY2D1Q68D10 685 aaPredicted RBP23.14■■□□□ 1.3
SMIM3-201ENST00000526627 STAG2Q8N3U4 1231 aa23.14■■□□□ 1.3
SMIM3-201ENST00000526627 DYNLL2Q96FJ2 89 aa23.14■■□□□ 1.3
SMIM3-201ENST00000526627 PARP3Q9Y6F1 533 aa23.14■■□□□ 1.3
SMIM3-201ENST00000526627 SLC35G1Q2M3R5 365 aa23.14■■□□□ 1.29
SMIM3-201ENST00000526627 DGKHQ86XP1 1220 aa23.14■■□□□ 1.29
SMIM3-201ENST00000526627 IQUBQ8NA54 791 aa23.14■■□□□ 1.29
SMIM3-201ENST00000526627 ARHGEF1Q92888 912 aaKnown RBP23.14■■□□□ 1.29
SMIM3-201ENST00000526627 H2AFXP16104 143 aaPredicted RBP23.13■■□□□ 1.29
SMIM3-201ENST00000526627 VPS72Q15906 364 aa23.13■■□□□ 1.29
SMIM3-201ENST00000526627 GRIK5Q16478 980 aa23.13■■□□□ 1.29
SMIM3-201ENST00000526627 SH3RF3Q8TEJ3 882 aaPredicted RBP23.13■■□□□ 1.29
SMIM3-201ENST00000526627 BLZF1Q9H2G9 400 aa23.13■■□□□ 1.29
SMIM3-201ENST00000526627 KAT14Q9H8E8 782 aa23.13■■□□□ 1.29
SMIM3-201ENST00000526627 NPHP1O15259 732 aa23.13■■□□□ 1.29
SMIM3-201ENST00000526627 TYW1BQ6NUM6 668 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms