RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 ZSCAN29Q8IWY8 852 aaPredicted RBP7.36□□□□□ -1.23
SVIP-202ENST00000525670 C3orf58Q8NDZ4 430 aa7.36□□□□□ -1.23
SVIP-202ENST00000525670 FLCNQ8NFG4 579 aa7.36□□□□□ -1.23
SVIP-202ENST00000525670 FBF1Q8TES7 1133 aa7.36□□□□□ -1.23
SVIP-202ENST00000525670 SRCIN1Q9C0H9 1055 aa7.36□□□□□ -1.23
SVIP-202ENST00000525670 PAK6Q9NQU5 681 aaPredicted RBP7.36□□□□□ -1.23
SVIP-202ENST00000525670 ADGRB1O14514 1584 aa7.36□□□□□ -1.23
SVIP-202ENST00000525670 PRAG1Q86YV5 1406 aa7.35□□□□□ -1.23
SVIP-202ENST00000525670 ADGRL3Q9HAR2 1447 aa7.35□□□□□ -1.23
SVIP-202ENST00000525670 TRPM1Q7Z4N2 1603 aa7.35□□□□□ -1.23
SVIP-202ENST00000525670 FAM87AP0C7U9 286 aa7.35□□□□□ -1.23
SVIP-202ENST00000525670 HSPA1LP34931 641 aa7.35□□□□□ -1.23
SVIP-202ENST00000525670 MAP1SQ66K74 1059 aaPredicted RBP7.35□□□□□ -1.23
SVIP-202ENST00000525670 BCL7CQ8WUZ0 217 aaPredicted RBP7.35□□□□□ -1.23
SVIP-202ENST00000525670 NECAB3Q96P71 396 aaPredicted RBP7.35□□□□□ -1.23
SVIP-202ENST00000525670 HIRIP3Q9BW71 556 aaPredicted RBP7.35□□□□□ -1.23
SVIP-202ENST00000525670 SLC5A6Q9Y289 635 aa7.35□□□□□ -1.23
SVIP-202ENST00000525670 PHLPP1O60346 1717 aa7.35□□□□□ -1.23
SVIP-202ENST00000525670 LRPPRCP42704 1394 aaKnown RBP7.34□□□□□ -1.23
SVIP-202ENST00000525670 PIK3R4Q99570 1358 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 GIPC1O14908 333 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 TOM1O60784 492 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 HCLS1P14317 486 aaPredicted RBP7.34□□□□□ -1.23
SVIP-202ENST00000525670 ATF3P18847 181 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 MAPK8P45983 427 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 ERVK-24P63145 666 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 ZNF252P-AS1Q0IIN9 211 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 COL19A1Q14993 1142 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 ALG1LQ6GMV1 187 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 STK11IPQ8N1F8 1099 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 DDX17Q92841 729 aaKnown RBP7.34□□□□□ -1.23
SVIP-202ENST00000525670 PRAM1Q96QH2 718 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 CEP44Q9C0F1 390 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 CBX8Q9HC52 389 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 CACNA2D2Q9NY47 1150 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 QRICH2Q9H0J4 1663 aa7.34□□□□□ -1.23
SVIP-202ENST00000525670 RGPD8O14715 1765 aaPredicted RBP7.33□□□□□ -1.24
SVIP-202ENST00000525670 FMR1Q06787 632 aaKnown RBP eCLIP7.33□□□□□ -1.24
SVIP-202ENST00000525670 RNF214Q8ND24 703 aa7.33□□□□□ -1.24
SVIP-202ENST00000525670 NETO1Q8TDF5 533 aa7.33□□□□□ -1.24
SVIP-202ENST00000525670 GPBAR1Q8TDU6 330 aa7.33□□□□□ -1.24
SVIP-202ENST00000525670 MISP3Q96FF7 219 aa7.33□□□□□ -1.24
SVIP-202ENST00000525670 ASB16Q96NS5 453 aa7.33□□□□□ -1.24
SVIP-202ENST00000525670 SSU72Q9NP77 194 aaKnown RBP7.33□□□□□ -1.24
SVIP-202ENST00000525670 PPM1HQ9ULR3 514 aa7.33□□□□□ -1.24
SVIP-202ENST00000525670 SAMM50Q9Y512 469 aa7.33□□□□□ -1.24
SVIP-202ENST00000525670 MST1RQ04912 1400 aa7.33□□□□□ -1.24
SVIP-202ENST00000525670 CDC42BPGQ6DT37 1551 aa7.33□□□□□ -1.24
SVIP-202ENST00000525670 FMN2Q9NZ56 1722 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 NEFMP07197 916 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 BMP6P22004 513 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 XPCQ01831 940 aaPredicted RBP7.32□□□□□ -1.24
SVIP-202ENST00000525670 KCNA1Q09470 495 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.32□□□□□ -1.24
SVIP-202ENST00000525670 ANKRD24Q8TF21 1146 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 ISL2Q96A47 359 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 ACSBG1Q96GR2 724 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 DUSP23Q9BVJ7 150 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 OSBPL7Q9BZF2 842 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 C14orf93Q9H972 538 aaKnown RBP7.32□□□□□ -1.24
SVIP-202ENST00000525670 MKNK2Q9HBH9 465 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 POGKQ9P215 609 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 IVNS1ABPQ9Y6Y0 642 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 TECPR2O15040 1411 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 KIAA1210Q9ULL0 1709 aa7.32□□□□□ -1.24
SVIP-202ENST00000525670 ROCK2O75116 1388 aaKnown RBP7.32□□□□□ -1.24
SVIP-202ENST00000525670 ENC1O14682 589 aa7.31□□□□□ -1.24
SVIP-202ENST00000525670 LEFTY1O75610 366 aa7.31□□□□□ -1.24
SVIP-202ENST00000525670 NBPF8Q3BBV2 869 aa7.31□□□□□ -1.24
SVIP-202ENST00000525670 TPTE2Q6XPS3 522 aa7.31□□□□□ -1.24
SVIP-202ENST00000525670 SPRED2Q7Z698 418 aa7.31□□□□□ -1.24
SVIP-202ENST00000525670 PLD6Q8N2A8 252 aaKnown RBP7.31□□□□□ -1.24
SVIP-202ENST00000525670 GRIN3AQ8TCU5 1115 aa7.31□□□□□ -1.24
SVIP-202ENST00000525670 COL16A1Q07092 1604 aaPredicted RBP7.3□□□□□ -1.24
SVIP-202ENST00000525670 TRIM37O94972 964 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 JUNBP17275 347 aaPredicted RBP7.3□□□□□ -1.24
SVIP-202ENST00000525670 ITGB5P18084 799 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 LRRC14Q15048 493 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 SCARA3Q6AZY7 606 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 MPRIPQ6WCQ1 1025 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 FAM181AQ8N9Y4 354 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 ASIC4Q96FT7 647 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 SETDB2Q96T68 719 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 C19orf44Q9H6X5 657 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 VAV3Q9UKW4 847 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 WWC3Q9ULE0 1092 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 DLC1Q96QB1 1528 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 NHSL1Q5SYE7 1610 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 USP32Q8NFA0 1604 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 C1orf167Q5SNV9 1468 aa7.3□□□□□ -1.24
SVIP-202ENST00000525670 MED1Q15648 1581 aaPredicted RBP7.29□□□□□ -1.24
SVIP-202ENST00000525670 DCCP43146 1447 aa7.29□□□□□ -1.24
SVIP-202ENST00000525670 PAGE1O75459 146 aa7.29□□□□□ -1.24
SVIP-202ENST00000525670 YBX3P16989 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
SVIP-202ENST00000525670 ATP2B2Q01814 1243 aa7.29□□□□□ -1.24
SVIP-202ENST00000525670 PRKCQQ04759 706 aa7.29□□□□□ -1.24
SVIP-202ENST00000525670 BNIP3Q12983 259 aa7.29□□□□□ -1.24
SVIP-202ENST00000525670 ZNF574Q6ZN55 896 aaPredicted RBP7.29□□□□□ -1.24
SVIP-202ENST00000525670 BRINP3Q76B58 766 aa7.29□□□□□ -1.24
SVIP-202ENST00000525670 WFDC3Q8IUB2 231 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms