RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CTDP1Q9Y5B0 961 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P40-201ENST00000525121 PLIN4Q96Q06 1357 aa6.38□□□□□ -1.39
HMGB1P40-201ENST00000525121 ATAD5Q96QE3 1844 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 SMIM22K7EJ46 135 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 FOXP2O15409 715 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 EIF5BO60841 1220 aaKnown RBP6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 FLOT1O75955 427 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 FMNL1O95466 1100 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 HOXA7P31268 230 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 HERVK_113P62684 666 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 CCNA1P78396 465 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 LACTBP83111 547 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 IKQ13123 557 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 SART3Q15020 963 aaKnown RBP6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 FAM110CQ1W6H9 321 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 COL13A1Q5TAT6 717 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 SAMD1Q6SPF0 538 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 SKAP1Q86WV1 359 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 CLEC10AQ8IUN9 316 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 SPICE1Q8N0Z3 855 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 ANKRD13CQ8N6S4 541 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 CD99L2Q8TCZ2 262 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 CEP95Q96GE4 821 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 UBAC1Q9BSL1 405 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 PAGR1Q9BTK6 254 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 EFCC1Q9HA90 598 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 MTMR4Q9NYA4 1195 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 HOXC10Q9NYD6 342 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 TRIM17Q9Y577 477 aa6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 BAZ2AQ9UIF9 1905 aaKnown RBP6.37□□□□□ -1.39
HMGB1P40-201ENST00000525121 LOC285556D6RIA3 1793 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 MYPNQ86TC9 1320 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 ADGRA2Q96PE1 1338 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 A0A1W2PRG0 241 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 ERICH2A1L162 156 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 TNPO2O14787 897 aaKnown RBP6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 REC8O95072 547 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 TOP1P11387 765 aaKnown RBP6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 PSMC4P43686 418 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 PRMT2P55345 433 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 COG2Q14746 738 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 CCDC96Q2M329 555 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 C17orf99Q6UX52 265 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 CATSPERGQ6ZRH7 1159 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 TBC1D10CQ8IV04 446 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 LRRC47Q8N1G4 583 aaKnown RBP6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 MB21D1Q8N884 522 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 GMCL1P1Q8NEA9 526 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 GPRC5AQ8NFJ5 357 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 COA7Q96BR5 231 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 R3HDMLQ9H3Y0 253 aa6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 RBM8AQ9Y5S9 174 aaKnown RBP6.36□□□□□ -1.39
HMGB1P40-201ENST00000525121 CEP350Q5VT06 3117 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 NEDD4P46934 1319 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 IGKV6D-41A0A0C4DH26 115 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 B4E1Z4 1266 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 F5H6K3 240 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 KDM4AO75164 1064 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 ECM2O94769 699 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 NDUFB10O96000 172 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 FGRP09769 529 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 BCRP11274 1271 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 BMP3P12645 472 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 ZKSCAN1P17029 563 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 MCCP23508 829 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 MAPK4P31152 587 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 COPB2P35606 906 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 SLC1A4P43007 532 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 STAT2P52630 851 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 ERVK-9P63128 1117 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 ERVK-24P63145 666 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 PTH1RQ03431 593 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 KLRC3Q07444 240 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 PLS1Q14651 629 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 FAM83BQ5T0W9 1011 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 WDR78Q5VTH9 848 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 SLFN13Q68D06 897 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 FBXO46Q6PJ61 603 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 OTOP1Q7RTM1 612 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 FAM160B2Q86V87 743 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 NCOA7Q8NI08 942 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 RAET1EQ8TD07 263 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 CHURC1Q8WUH1 139 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 MAP4K1Q92918 833 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 MKL1Q969V6 931 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 GMCL1Q96IK5 515 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 TTC14Q96N46 770 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 P2RX7Q99572 595 aaKnown RBP6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 SLF1Q9BQI6 1058 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 MCOLN1Q9GZU1 580 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 KAT14Q9H8E8 782 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 TCP11L1Q9NUJ3 509 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 MORF4L1Q9UBU8 362 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 FEM1BQ9UK73 627 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 MTMR7Q9Y216 660 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 RABGAP1Q9Y3P9 1069 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 IVNS1ABPQ9Y6Y0 642 aa6.35□□□□□ -1.39
HMGB1P40-201ENST00000525121 PHIPQ8WWQ0 1821 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms