RNA–Protein interactions for RNA: ENST00000522959.5

ARFGAP1-216, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 556 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-216ENST00000522959 SPICE1Q8N0Z3 855 aa18.64■□□□□ 0.57
ARFGAP1-216ENST00000522959 GPATCH3Q96I76 525 aa18.64■□□□□ 0.57
ARFGAP1-216ENST00000522959 DEFB118Q96PH6 123 aa18.64■□□□□ 0.57
ARFGAP1-216ENST00000522959 TMX2Q9Y320 296 aa18.64■□□□□ 0.57
ARFGAP1-216ENST00000522959 RABGAP1Q9Y3P9 1069 aa18.64■□□□□ 0.57
ARFGAP1-216ENST00000522959 TACC3Q9Y6A5 838 aa18.64■□□□□ 0.57
ARFGAP1-216ENST00000522959 GLRX3O76003 335 aaKnown RBP18.63■□□□□ 0.57
ARFGAP1-216ENST00000522959 CCDC129Q6ZRS4 1044 aa18.63■□□□□ 0.57
ARFGAP1-216ENST00000522959 FLRT1Q9NZU1 646 aa18.63■□□□□ 0.57
ARFGAP1-216ENST00000522959 STAP2Q9UGK3 403 aa18.63■□□□□ 0.57
ARFGAP1-216ENST00000522959 SMCHD1A6NHR9 2005 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 SZT2Q5T011 3432 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 MINDY4BA8MYZ0 360 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 MNX1P50219 401 aaPredicted RBP18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 PDE1AP54750 535 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 ICA1Q05084 483 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 PLEKHH3Q7Z736 793 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 IFNL3Q8IZI9 196 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 CCDC17Q96LX7 622 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 CRISPLD2Q9H0B8 497 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 VCPKMTQ9H867 229 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 ARPP21Q9UBL0 812 aaPredicted RBP18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 ROBO3Q96MS0 1386 aa18.62■□□□□ 0.57
ARFGAP1-216ENST00000522959 PLXNA1Q9UIW2 1896 aa18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 PATL2C9JE40 543 aaKnown RBP18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 HMGCRP04035 888 aa18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 ZFYP08048 801 aaPredicted RBP18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 MAPK4P31152 587 aa18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 MAP3K21Q5TCX8 1036 aa18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 GIMAP6Q6P9H5 292 aa18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 NUDT12Q9BQG2 462 aa18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 INCENPQ9NQS7 918 aa18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 FBXO28Q9NVF7 368 aa18.61■□□□□ 0.57
ARFGAP1-216ENST00000522959 ERC2O15083 957 aa18.6■□□□□ 0.57
ARFGAP1-216ENST00000522959 PRDM1O75626 825 aa18.6■□□□□ 0.57
ARFGAP1-216ENST00000522959 COG2Q14746 738 aa18.6■□□□□ 0.57
ARFGAP1-216ENST00000522959 NPLOC4Q8TAT6 608 aa18.6■□□□□ 0.57
ARFGAP1-216ENST00000522959 DIS3LQ8TF46 1054 aaKnown RBP18.6■□□□□ 0.57
ARFGAP1-216ENST00000522959 GCC1Q96CN9 775 aa18.6■□□□□ 0.57
ARFGAP1-216ENST00000522959 ATG4CQ96DT6 458 aa18.6■□□□□ 0.57
ARFGAP1-216ENST00000522959 FSD1Q9BTV5 496 aa18.6■□□□□ 0.57
ARFGAP1-216ENST00000522959 ZNF236Q9UL36 1845 aa18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 IGKV6D-41A0A0C4DH26 115 aa18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 IGHA2P01877 340 aa18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 XRCC5P13010 732 aaKnown RBP18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 PTPREP23469 700 aa18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 DSG3P32926 999 aa18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 CACNB2Q08289 660 aaPredicted RBP18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 VPS53Q5VIR6 699 aa18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 B4GALNT3Q6L9W6 998 aa18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 SMC5Q8IY18 1101 aa18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 GTF3C2Q8WUA4 911 aaPredicted RBP18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 MOV10L1Q9BXT6 1211 aaKnown RBP18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 TANGO6Q9C0B7 1094 aa18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 LNPKQ9C0E8 428 aa18.59■□□□□ 0.57
ARFGAP1-216ENST00000522959 RPTORQ8N122 1335 aa18.58■□□□□ 0.57
ARFGAP1-216ENST00000522959 CCND3P30281 292 aaPredicted RBP18.58■□□□□ 0.56
ARFGAP1-216ENST00000522959 ATP2B2Q01814 1243 aa18.58■□□□□ 0.56
ARFGAP1-216ENST00000522959 NKX2-3Q8TAU0 364 aa18.58■□□□□ 0.56
ARFGAP1-216ENST00000522959 NUP88Q99567 741 aaPredicted RBP18.58■□□□□ 0.56
ARFGAP1-216ENST00000522959 KANSL2Q9H9L4 492 aa18.58■□□□□ 0.56
ARFGAP1-216ENST00000522959 ARHGEF10LQ9HCE6 1279 aa18.58■□□□□ 0.56
ARFGAP1-216ENST00000522959 ADAMTS5Q9UNA0 930 aa18.58■□□□□ 0.56
ARFGAP1-216ENST00000522959 H0YGN5 161 aa18.57■□□□□ 0.56
ARFGAP1-216ENST00000522959 TFRCP02786 760 aaKnown RBP18.57■□□□□ 0.56
ARFGAP1-216ENST00000522959 APPP05067 770 aa18.57■□□□□ 0.56
ARFGAP1-216ENST00000522959 PRKAR2AP13861 404 aaKnown RBP18.57■□□□□ 0.56
ARFGAP1-216ENST00000522959 MAP2K5Q13163 448 aa18.57■□□□□ 0.56
ARFGAP1-216ENST00000522959 AMOTL1Q8IY63 956 aa18.57■□□□□ 0.56
ARFGAP1-216ENST00000522959 DDRGK1Q96HY6 314 aa18.57■□□□□ 0.56
ARFGAP1-216ENST00000522959 SPATC1LQ9H0A9 340 aa18.57■□□□□ 0.56
ARFGAP1-216ENST00000522959 HOXC10Q9NYD6 342 aa18.57■□□□□ 0.56
ARFGAP1-216ENST00000522959 SUPT16HQ9Y5B9 1047 aaKnown RBP18.57■□□□□ 0.56
ARFGAP1-216ENST00000522959 WDR46O15213 610 aaKnown RBP18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 FLOT1O75955 427 aa18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 FARP2O94887 1054 aaPredicted RBP18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 SLC34A2O95436 690 aa18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 TDO2P48775 406 aa18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 GRB14Q14449 540 aa18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 TMEM132BQ14DG7 1078 aa18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 WDR78Q5VTH9 848 aa18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 SOCS4Q8WXH5 440 aa18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 LPAR1Q92633 364 aa18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 PAWRQ96IZ0 340 aaKnown RBP18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 FAM227BQ96M60 508 aa18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 MKNK2Q9HBH9 465 aa18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 HMX1Q9NP08 348 aaPredicted RBP18.56■□□□□ 0.56
ARFGAP1-216ENST00000522959 A0A0D9SFI3 127 aa18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 SLC15A5A6NIM6 579 aa18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 COBLO75128 1261 aa18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 GNAT2P19087 354 aa18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 ERCC3P19447 782 aa18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 RGS2P41220 211 aa18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 FAM47AQ5JRC9 791 aa18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 FAM83BQ5T0W9 1011 aa18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 LHX8Q68G74 356 aa18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 SAMD1Q6SPF0 538 aaPredicted RBP18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 TRPV1Q8NER1 839 aa18.55■□□□□ 0.56
ARFGAP1-216ENST00000522959 REPS2Q8NFH8 660 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms