RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 RPAP2Q8IXW5 612 aaPredicted RBP18■□□□□ 0.47
PRKDC-204ENST00000521331 SHCBP1Q8NEM2 672 aa18■□□□□ 0.47
PRKDC-204ENST00000521331 SDR42E1Q8WUS8 393 aa18■□□□□ 0.47
PRKDC-204ENST00000521331 DNAJC2Q99543 621 aaKnown RBP18■□□□□ 0.47
PRKDC-204ENST00000521331 MOV10L1Q9BXT6 1211 aaKnown RBP18■□□□□ 0.47
PRKDC-204ENST00000521331 SENP6Q9GZR1 1112 aaPredicted RBP18■□□□□ 0.47
PRKDC-204ENST00000521331 SPATC1LQ9H0A9 340 aa18■□□□□ 0.47
PRKDC-204ENST00000521331 TCRBV5S4A2TA0A5A2 114 aa17.99■□□□□ 0.47
PRKDC-204ENST00000521331 IGHA2P01877 340 aa17.99■□□□□ 0.47
PRKDC-204ENST00000521331 ADORA2AP29274 412 aa17.99■□□□□ 0.47
PRKDC-204ENST00000521331 CYP2C19P33261 490 aa17.99■□□□□ 0.47
PRKDC-204ENST00000521331 LCORLQ8N3X6 602 aa17.99■□□□□ 0.47
PRKDC-204ENST00000521331 SH2D4AQ9H788 454 aa17.99■□□□□ 0.47
PRKDC-204ENST00000521331 SLC5A4Q9NY91 659 aa17.99■□□□□ 0.47
PRKDC-204ENST00000521331 CYBAP13498 195 aa17.98■□□□□ 0.47
PRKDC-204ENST00000521331 MDM2Q00987 491 aaPredicted RBP17.98■□□□□ 0.47
PRKDC-204ENST00000521331 LBHD1Q9BQE6 289 aaPredicted RBP17.98■□□□□ 0.47
PRKDC-204ENST00000521331 ARHGEF10LQ9HCE6 1279 aa17.98■□□□□ 0.47
PRKDC-204ENST00000521331 ATP8A2Q9NTI2 1148 aa17.98■□□□□ 0.47
PRKDC-204ENST00000521331 APBB1O00213 710 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 DLL1O00548 723 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 RAB11FIP3O75154 756 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 ERCC3P19447 782 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 DSG3P32926 999 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 EVX2Q03828 476 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 Q7L0L9 218 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 ABRAQ8N0Z2 381 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 SLC44A5Q8NCS7 719 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 ARRDC4Q8NCT1 418 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 TRPV1Q8NER1 839 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 MROH8Q9H579 483 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 MTMR10Q9NXD2 777 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 PRKAG2Q9UGJ0 569 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 STXBP5LQ9Y2K9 1186 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 ZBED9Q6R2W3 1325 aa17.97■□□□□ 0.47
PRKDC-204ENST00000521331 CYP2D6P10635 497 aa17.96■□□□□ 0.47
PRKDC-204ENST00000521331 ICA1Q05084 483 aa17.96■□□□□ 0.47
PRKDC-204ENST00000521331 AMOTL1Q8IY63 956 aa17.96■□□□□ 0.47
PRKDC-204ENST00000521331 CCDC17Q96LX7 622 aa17.96■□□□□ 0.47
PRKDC-204ENST00000521331 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.96■□□□□ 0.476e-8■□□□□ 10.9
PRKDC-204ENST00000521331 ARMT1Q9H993 441 aa17.96■□□□□ 0.47
PRKDC-204ENST00000521331 PAG1Q9NWQ8 432 aa17.96■□□□□ 0.47
PRKDC-204ENST00000521331 DDX19BQ9UMR2 479 aa17.96■□□□□ 0.47
PRKDC-204ENST00000521331 TMX2Q9Y320 296 aa17.96■□□□□ 0.47
PRKDC-204ENST00000521331 NAV1Q8NEY1 1877 aa17.95■□□□□ 0.46
PRKDC-204ENST00000521331 KBTBD13C9JR72 458 aa17.95■□□□□ 0.46
PRKDC-204ENST00000521331 FLOT1O75955 427 aa17.95■□□□□ 0.46
PRKDC-204ENST00000521331 MBD4O95243 580 aa17.95■□□□□ 0.46
PRKDC-204ENST00000521331 ADD2P35612 726 aa17.95■□□□□ 0.46
PRKDC-204ENST00000521331 ATN1P54259 1190 aaPredicted RBP17.95■□□□□ 0.46
PRKDC-204ENST00000521331 DYNLL2Q96FJ2 89 aa17.95■□□□□ 0.46
PRKDC-204ENST00000521331 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
PRKDC-204ENST00000521331 VCPKMTQ9H867 229 aa17.95■□□□□ 0.46
PRKDC-204ENST00000521331 COL6A3P12111 3177 aa17.95■□□□□ 0.46
PRKDC-204ENST00000521331 ZNF236Q9UL36 1845 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 WDR46O15213 610 aaKnown RBP17.94■□□□□ 0.46
PRKDC-204ENST00000521331 SEPT4O43236 478 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 AKR1B1P15121 316 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 ATP5JP18859 108 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 RTP1P59025 263 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 PLS1Q14651 629 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 KIAA1755Q5JYT7 1200 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 NCAPG2Q86XI2 1143 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 ATG4CQ96DT6 458 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 BOLA2Q9H3K6 86 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 CHMP4BQ9H444 224 aaKnown RBP17.94■□□□□ 0.46
PRKDC-204ENST00000521331 ZBTB40Q9NUA8 1239 aa17.94■□□□□ 0.46
PRKDC-204ENST00000521331 CUL9Q8IWT3 2517 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 PRKAB2O43741 272 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 COBLO75128 1261 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 SLC25A27O95847 323 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 FCER1AP12319 257 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 GJC2Q5T442 439 aaPredicted RBP17.93■□□□□ 0.46
PRKDC-204ENST00000521331 C12orf60Q5U649 245 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 SIAH1Q8IUQ4 282 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 SIRT2Q8IXJ6 389 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 SPICE1Q8N0Z3 855 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 HAUS7Q99871 368 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
PRKDC-204ENST00000521331 CDK8P49336 464 aa17.92■□□□□ 0.46
PRKDC-204ENST00000521331 UBE3CQ15386 1083 aa17.92■□□□□ 0.46
PRKDC-204ENST00000521331 FAM109BQ6ICB4 259 aaPredicted RBP17.92■□□□□ 0.46
PRKDC-204ENST00000521331 SLC39A5Q6ZMH5 540 aa17.92■□□□□ 0.46
PRKDC-204ENST00000521331 C16orf86Q6ZW13 317 aa17.92■□□□□ 0.46
PRKDC-204ENST00000521331 CLEC10AQ8IUN9 316 aa17.92■□□□□ 0.46
PRKDC-204ENST00000521331 MIER1Q8N108 512 aa17.92■□□□□ 0.46
PRKDC-204ENST00000521331 NRBP1Q9UHY1 535 aa17.92■□□□□ 0.46
PRKDC-204ENST00000521331 ATP11BQ9Y2G3 1177 aa17.92■□□□□ 0.46
PRKDC-204ENST00000521331 USP17L12C9JPN9 530 aa17.91■□□□□ 0.46
PRKDC-204ENST00000521331 USP17L21D6R901 530 aa17.91■□□□□ 0.46
PRKDC-204ENST00000521331 ZSCAN25Q6NSZ9 544 aa17.91■□□□□ 0.46
PRKDC-204ENST00000521331 MAML3Q96JK9 1138 aa17.91■□□□□ 0.46
PRKDC-204ENST00000521331 KANSL2Q9H9L4 492 aa17.91■□□□□ 0.46
PRKDC-204ENST00000521331 COG6Q9Y2V7 657 aa17.91■□□□□ 0.46
PRKDC-204ENST00000521331 FRMPD3Q5JV73 1810 aa17.91■□□□□ 0.46
PRKDC-204ENST00000521331 A0A0G2JMZ2 1700 aa17.9■□□□□ 0.46
PRKDC-204ENST00000521331 POTEB2H3BUK9 544 aa17.9■□□□□ 0.46
PRKDC-204ENST00000521331 TMEM132BQ14DG7 1078 aa17.9■□□□□ 0.46
PRKDC-204ENST00000521331 SNX17Q15036 470 aa17.9■□□□□ 0.46
PRKDC-204ENST00000521331 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms