RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 CALM1P0DP23 149 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 CALM2P0DP24 149 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 CALM3P0DP25 149 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 SNHG28P0DPA3 235 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 CASTP20810 708 aaKnown RBP7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 RPS6KB1P23443 525 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 HOXA7P31268 230 aaPredicted RBP7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 ANTXR2P58335 489 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 SPP2Q13103 211 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 PABPC4Q13310 644 aaKnown RBP eCLIP7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 WTAPQ15007 396 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 RABEP1Q15276 862 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 ANKRD1Q15327 319 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 ADCK5Q3MIX3 580 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 OTUD7BQ6GQQ9 843 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 CYB5R4Q7L1T6 521 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 ANKRD23Q86SG2 305 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 ENAHQ8N8S7 591 aaPredicted RBP7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 GTF3C2Q8WUA4 911 aaPredicted RBP7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 DCAF4Q8WV16 495 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 OTUD5Q96G74 571 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 GMCL1Q96IK5 515 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 CAPNS2Q96L46 248 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 JAKMIP1Q96N16 626 aaKnown RBP7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 CFHR5Q9BXR6 569 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 VCPKMTQ9H867 229 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 INCENPQ9NQS7 918 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 TMOD4Q9NZQ9 345 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 TAF6LQ9Y6J9 622 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 MYPNQ86TC9 1320 aa7.47□□□□□ -1.21
IGHV4-55-201ENST00000520889 NID2Q14112 1375 aa7.46□□□□□ -1.21
IGHV4-55-201ENST00000520889 A0A1W2PRG0 241 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 SH2B2O14492 632 aaPredicted RBP7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 IFIT3O14879 490 aaKnown RBP7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 DDAH1O94760 285 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 FDX1P10109 184 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 SMARCA1P28370 1054 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 GJA5P36382 358 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 MOGSQ13724 837 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 GPATCH4Q5T3I0 446 aaKnown RBP7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 IFIT1BQ5T764 474 aaKnown RBP7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 STK11IPQ8N1F8 1099 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 CHMP4CQ96CF2 233 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 KIF2CQ99661 725 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 FEZ1Q99689 392 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 TMEM47Q9BQJ4 181 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 KAT14Q9H8E8 782 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 LY9Q9HBG7 655 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 CLIP2Q9UDT6 1046 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 PNMA3Q9UL41 463 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 PNMA2Q9UL42 364 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 STX8Q9UNK0 236 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 AGTPBP1Q9UPW5 1226 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 MYH6P13533 1939 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 A0A0G2JMZ2 1700 aa7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 WDR33Q9C0J8 1336 aaKnown RBP7.46□□□□□ -1.22
IGHV4-55-201ENST00000520889 TRIM75PA6NK02 468 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 USP17L15C9J2P7 530 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 USP17L13C9JLJ4 530 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 USP17L11C9JVI0 530 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 USP17L18D6R9N7 530 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 USP17L22D6RA61 530 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 USP17L17D6RBQ6 530 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 USP17L19D6RCP7 530 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 USP17L20D6RJB6 530 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 F5H6K3 240 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 NMT2O60551 498 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 MCM2P49736 904 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 KLRC3Q07444 240 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 USP17L24Q0WX57 530 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 TROAPQ12815 778 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 MTMR2Q13614 643 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 NOM1Q5C9Z4 860 aaKnown RBP7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 TMEM67Q5HYA8 995 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 CYP4F22Q6NT55 531 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 BTNL9Q6UXG8 535 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 LBX2Q6XYB7 198 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 SYNE3Q6ZMZ3 975 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 CATSPERGQ6ZRH7 1159 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 CATIPQ7Z7H3 387 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 PNMA1Q8ND90 353 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 NKX2-3Q8TAU0 364 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 ACER1Q8TDN7 264 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 CNKSR2Q8WXI2 1034 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZNF274Q96GC6 653 aaPredicted RBP7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 LZTS2Q9BRK4 669 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 EMILIN3Q9NT22 766 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 PDRG1Q9NUG6 133 aa7.45□□□□□ -1.22
IGHV4-55-201ENST00000520889 COL11A1P12107 1806 aaPredicted RBP7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 CCL15-CCL14A0A0B4J2E2 113 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 CCDC196A0A1B0GTZ2 297 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 CCDC69A6NI79 296 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 CA12O43570 354 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 ST18O60284 1047 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 NDUFB10O96000 172 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 PDHBP11177 359 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 BMP3P12645 472 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 VCAM1P19320 739 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 OSBPP22059 807 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 KIF5BP33176 963 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms