RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 ANKS1AQ92625 1134 aa26.93■■□□□ 1.9
NKX6-3-201ENST00000518699 TM6SF1Q9BZW5 370 aa26.93■■□□□ 1.9
NKX6-3-201ENST00000518699 VCPKMTQ9H867 229 aa26.93■■□□□ 1.9
NKX6-3-201ENST00000518699 UPF2Q9HAU5 1272 aaKnown RBP26.93■■□□□ 1.9
NKX6-3-201ENST00000518699 PRC1O43663 620 aa26.92■■□□□ 1.9
NKX6-3-201ENST00000518699 PSMA5P28066 241 aa26.92■■□□□ 1.9
NKX6-3-201ENST00000518699 SART3Q15020 963 aaKnown RBP26.92■■□□□ 1.9
NKX6-3-201ENST00000518699 GMCL1P1Q8NEA9 526 aa26.92■■□□□ 1.9
NKX6-3-201ENST00000518699 LPAR1Q92633 364 aa26.92■■□□□ 1.9
NKX6-3-201ENST00000518699 EMILIN3Q9NT22 766 aa26.92■■□□□ 1.9
NKX6-3-201ENST00000518699 TMOD4Q9NZQ9 345 aa26.92■■□□□ 1.9
NKX6-3-201ENST00000518699 PARP14Q460N5 1801 aa26.92■■□□□ 1.9
NKX6-3-201ENST00000518699 TOP1P11387 765 aaKnown RBP26.91■■□□□ 1.9
NKX6-3-201ENST00000518699 TM4SF4P48230 202 aa26.91■■□□□ 1.9
NKX6-3-201ENST00000518699 DHX32Q7L7V1 743 aaKnown RBP26.91■■□□□ 1.9
NKX6-3-201ENST00000518699 LRRC47Q8N1G4 583 aaKnown RBP26.91■■□□□ 1.9
NKX6-3-201ENST00000518699 TMEM87BQ96K49 555 aa26.91■■□□□ 1.9
NKX6-3-201ENST00000518699 TMEM47Q9BQJ4 181 aa26.91■■□□□ 1.9
NKX6-3-201ENST00000518699 GOPCQ9HD26 462 aa26.91■■□□□ 1.9
NKX6-3-201ENST00000518699 RBM25P49756 843 aaKnown RBP26.9■■□□□ 1.9
NKX6-3-201ENST00000518699 DGKZQ13574 1117 aa26.9■■□□□ 1.9
NKX6-3-201ENST00000518699 ZYXQ15942 572 aaKnown RBP26.9■■□□□ 1.9
NKX6-3-201ENST00000518699 BLOC1S2Q6QNY1 142 aa26.9■■□□□ 1.9
NKX6-3-201ENST00000518699 CHST3Q7LGC8 479 aa26.9■■□□□ 1.9
NKX6-3-201ENST00000518699 C22orf23Q9BZE7 217 aa26.9■■□□□ 1.9
NKX6-3-201ENST00000518699 ZCCHC17Q9NP64 241 aaKnown RBP26.9■■□□□ 1.9
NKX6-3-201ENST00000518699 AGTPBP1Q9UPW5 1226 aa26.9■■□□□ 1.9
NKX6-3-201ENST00000518699 ERICH2A1L162 156 aa26.89■■□□□ 1.9
NKX6-3-201ENST00000518699 IFIT3O14879 490 aaKnown RBP26.89■■□□□ 1.9
NKX6-3-201ENST00000518699 EXOSC10Q01780 885 aaKnown RBP26.89■■□□□ 1.9
NKX6-3-201ENST00000518699 GADL1Q6ZQY3 521 aa26.89■■□□□ 1.9
NKX6-3-201ENST00000518699 ANKRD23Q86SG2 305 aa26.89■■□□□ 1.9
NKX6-3-201ENST00000518699 PTPN18Q99952 460 aa26.89■■□□□ 1.9
NKX6-3-201ENST00000518699 SLC45A1Q9Y2W3 748 aa26.89■■□□□ 1.9
NKX6-3-201ENST00000518699 VCAM1P19320 739 aa26.88■■□□□ 1.89
NKX6-3-201ENST00000518699 CASTP20810 708 aaKnown RBP26.88■■□□□ 1.89
NKX6-3-201ENST00000518699 GPAT2Q6NUI2 795 aa26.88■■□□□ 1.89
NKX6-3-201ENST00000518699 IFNL1Q8IU54 200 aa26.88■■□□□ 1.89
NKX6-3-201ENST00000518699 IGDCC4Q8TDY8 1250 aa26.88■■□□□ 1.89
NKX6-3-201ENST00000518699 ZSWIM6Q9HCJ5 1215 aa26.88■■□□□ 1.89
NKX6-3-201ENST00000518699 BTBD19C9JJ37 291 aa26.87■■□□□ 1.89
NKX6-3-201ENST00000518699 IGF2BP3O00425 579 aaKnown RBP eCLIP26.87■■□□□ 1.89
NKX6-3-201ENST00000518699 SH2B2O14492 632 aaPredicted RBP26.87■■□□□ 1.89
NKX6-3-201ENST00000518699 NDUFB10O96000 172 aa26.87■■□□□ 1.89
NKX6-3-201ENST00000518699 RPS6KB1P23443 525 aa26.87■■□□□ 1.89
NKX6-3-201ENST00000518699 TMEM67Q5HYA8 995 aa26.87■■□□□ 1.89
NKX6-3-201ENST00000518699 KIAA1755Q5JYT7 1200 aa26.87■■□□□ 1.89
NKX6-3-201ENST00000518699 IFIT1BQ5T764 474 aaKnown RBP26.87■■□□□ 1.89
NKX6-3-201ENST00000518699 RLFQ13129 1914 aa26.86■■□□□ 1.89
NKX6-3-201ENST00000518699 F5H6K3 240 aa26.86■■□□□ 1.89
NKX6-3-201ENST00000518699 WDR46O15213 610 aaKnown RBP26.86■■□□□ 1.89
NKX6-3-201ENST00000518699 KLRC3Q07444 240 aa26.86■■□□□ 1.89
NKX6-3-201ENST00000518699 WTAPQ15007 396 aa26.86■■□□□ 1.89
NKX6-3-201ENST00000518699 TREML2Q5T2D2 321 aa26.86■■□□□ 1.89
NKX6-3-201ENST00000518699 RUFY3Q7L099 469 aa26.86■■□□□ 1.89
NKX6-3-201ENST00000518699 LY9Q9HBG7 655 aa26.86■■□□□ 1.89
NKX6-3-201ENST00000518699 CPA1P15085 419 aa26.85■■□□□ 1.89
NKX6-3-201ENST00000518699 LIFRP42702 1097 aa26.85■■□□□ 1.89
NKX6-3-201ENST00000518699 FAM43AQ8N2R8 423 aa26.85■■□□□ 1.89
NKX6-3-201ENST00000518699 GMCL1Q96IK5 515 aa26.85■■□□□ 1.89
NKX6-3-201ENST00000518699 KAT14Q9H8E8 782 aa26.85■■□□□ 1.89
NKX6-3-201ENST00000518699 A0A0G2JMZ2 1700 aa26.85■■□□□ 1.89
NKX6-3-201ENST00000518699 HOXA7P31268 230 aaPredicted RBP26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 PABPC4Q13310 644 aaKnown RBP eCLIP26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 OTUD7BQ6GQQ9 843 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 SPICE1Q8N0Z3 855 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 FBXL16Q8N461 479 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 PNMA1Q8ND90 353 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 TBC1D32Q96NH3 1257 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 CYP46A1Q9Y6A2 500 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 CEP350Q5VT06 3117 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 SLFN13Q68D06 897 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 JMYQ8N9B5 988 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 TCEANC2Q96MN5 208 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 LRRC2Q9BYS8 371 aa26.84■■□□□ 1.89
NKX6-3-201ENST00000518699 PDHXO00330 501 aa26.83■■□□□ 1.88
NKX6-3-201ENST00000518699 ALDH1A1P00352 501 aa26.83■■□□□ 1.88
NKX6-3-201ENST00000518699 SGMS1Q86VZ5 419 aa26.83■■□□□ 1.88
NKX6-3-201ENST00000518699 TMTC2Q8N394 836 aa26.83■■□□□ 1.88
NKX6-3-201ENST00000518699 DCAF4Q8WV16 495 aa26.83■■□□□ 1.88
NKX6-3-201ENST00000518699 AGXT2Q9BYV1 514 aa26.83■■□□□ 1.88
NKX6-3-201ENST00000518699 UPF3BQ9BZI7 483 aaKnown RBP26.83■■□□□ 1.88
NKX6-3-201ENST00000518699 RPAP3Q9H6T3 665 aaPredicted RBP26.83■■□□□ 1.88
NKX6-3-201ENST00000518699 SENP2Q9HC62 589 aa26.83■■□□□ 1.88
NKX6-3-201ENST00000518699 GPHNQ9NQX3 736 aaPredicted RBP26.83■■□□□ 1.88
NKX6-3-201ENST00000518699 SNHG28P0DPA3 235 aa26.82■■□□□ 1.88
NKX6-3-201ENST00000518699 MAP2K1Q02750 393 aaPredicted RBP26.82■■□□□ 1.88
NKX6-3-201ENST00000518699 KIF2CQ99661 725 aa26.82■■□□□ 1.88
NKX6-3-201ENST00000518699 PNMA3Q9UL41 463 aa26.82■■□□□ 1.88
NKX6-3-201ENST00000518699 USP17L15C9J2P7 530 aa26.81■■□□□ 1.88
NKX6-3-201ENST00000518699 USP17L13C9JLJ4 530 aa26.81■■□□□ 1.88
NKX6-3-201ENST00000518699 USP17L11C9JVI0 530 aa26.81■■□□□ 1.88
NKX6-3-201ENST00000518699 USP17L18D6R9N7 530 aa26.81■■□□□ 1.88
NKX6-3-201ENST00000518699 USP17L22D6RA61 530 aa26.81■■□□□ 1.88
NKX6-3-201ENST00000518699 USP17L17D6RBQ6 530 aa26.81■■□□□ 1.88
NKX6-3-201ENST00000518699 USP17L19D6RCP7 530 aa26.81■■□□□ 1.88
NKX6-3-201ENST00000518699 USP17L20D6RJB6 530 aa26.81■■□□□ 1.88
NKX6-3-201ENST00000518699 PDHBP11177 359 aa26.81■■□□□ 1.88
NKX6-3-201ENST00000518699 USP17L24Q0WX57 530 aa26.81■■□□□ 1.88
NKX6-3-201ENST00000518699 RAD21O60216 631 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms