RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 TOP1P11387 765 aaKnown RBP13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 WTAPQ15007 396 aa13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 SEPT2Q15019 361 aa13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 TMEM67Q5HYA8 995 aa13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 CHST3Q7LGC8 479 aa13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 C2orf69Q8N8R5 385 aa13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 ZNF274Q96GC6 653 aaPredicted RBP13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 MAP3K14Q99558 947 aa13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 OTOFQ9HC10 1997 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 USP17L5A8MUK1 530 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 NMT2O60551 498 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 PTPRAP18433 802 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 AK2P54819 239 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 ICA1Q05084 483 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 FMR1Q06787 632 aaKnown RBP eCLIP13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 VGLL4Q14135 290 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 SHROOM1Q2M3G4 852 aaPredicted RBP13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 IFIT1BQ5T764 474 aaKnown RBP13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 ZKSCAN4Q969J2 545 aaPredicted RBP13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 ZKSCAN3Q9BRR0 538 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 PICK1Q9NRD5 415 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 TMX2Q9Y320 296 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 CSADQ9Y600 493 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 SNCAIPQ9Y6H5 919 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 PHIPQ8WWQ0 1821 aa13.41□□□□□ -0.26
ARFGEF1-202ENST00000517955 EEF2P13639 858 aaKnown RBP13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 PPATQ06203 517 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 TROAPQ12815 778 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 RAB3GAP1Q15042 981 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 PPP2R5BQ15173 497 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 ERO1BQ86YB8 467 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 GMCL1P1Q8NEA9 526 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 BRF1Q92994 677 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 ZSCAN31Q96LW9 406 aaPredicted RBP13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 TCEANC2Q96MN5 208 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 TMEM47Q9BQJ4 181 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 SH2D4AQ9H788 454 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 AS3MTQ9HBK9 375 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 ARHGEF10LQ9HCE6 1279 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 STX8Q9UNK0 236 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 FZD1Q9UP38 647 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 LIMCH1Q9UPQ0 1083 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 NID2Q14112 1375 aa13.4□□□□□ -0.26
ARFGEF1-202ENST00000517955 MYH4Q9Y623 1939 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 SPDYE5A6NIY4 337 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 DDAH1O94760 285 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 SNHG28P0DPA3 235 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 FGD1P98174 961 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 TTLL12Q14166 644 aaPredicted RBP13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 HHIPL1Q96JK4 782 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 KIAA1683Q9H0B3 1180 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 KAT14Q9H8E8 782 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 SENP2Q9HC62 589 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 GPHNQ9NQX3 736 aaPredicted RBP13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 CLIP2Q9UDT6 1046 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 AFG3L2Q9Y4W6 797 aa13.39□□□□□ -0.27
ARFGEF1-202ENST00000517955 A0A1W2PRG0 241 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 C19orf81C9J6K1 198 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 UBE2Q2LH0YL09 131 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 CXCL11O14625 94 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 CD2BP2O95400 341 aaKnown RBP13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 CALM1P0DP23 149 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 CALM2P0DP24 149 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 CALM3P0DP25 149 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 PDIA3P30101 505 aaKnown RBP13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 PRKG1Q13976 671 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 SH3D19Q5HYK7 790 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 APOA5Q6Q788 366 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 MOB2Q70IA6 237 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 CATIPQ7Z7H3 387 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 ZNF280CQ8ND82 737 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 PNMA1Q8ND90 353 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 CHMP4CQ96CF2 233 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 SH2B1Q9NRF2 756 aaPredicted RBP13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 BRPF3Q9ULD4 1205 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 TPCN1Q9ULQ1 816 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 RBM19Q9Y4C8 960 aaKnown RBP13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 SLC12A7Q9Y666 1083 aa13.38□□□□□ -0.27
ARFGEF1-202ENST00000517955 USP17L10C9JJH3 530 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 RIOK3O14730 519 aaKnown RBP13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 PFKFB2O60825 505 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 USP14P54578 494 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 BACE1P56817 501 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 APOBRQ0VD83 1088 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 PPIL2Q13356 520 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 SYNE3Q6ZMZ3 975 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 SAPCD2Q86UD0 394 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 ZNF654Q8IZM8 581 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 LPAR1Q92633 364 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 RNF25Q96BH1 459 aaPredicted RBP13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 SLC10A4Q96EP9 437 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 GMCL1Q96IK5 515 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 C12orf42Q96LP6 360 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 ZNF408Q9H9D4 720 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 HPS5Q9UPZ3 1129 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 KCNH4Q9UQ05 1017 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms