RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 USP14P54578 494 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 FCHSD1Q86WN1 690 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 CCDC26Q8TAB7 109 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 FAM71BQ8TC56 605 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 RPGRIP1Q96KN7 1286 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 LLPHQ9BRT6 129 aaKnown RBP13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 TMEM63CQ9P1W3 806 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 PIM2Q9P1W9 311 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 ZNF594Q96JF6 807 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 TSNARE1Q96NA8 513 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 SYNMO15061 1565 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 AK2P54819 239 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 GNGT1P63211 74 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 PRKG1Q13976 671 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 MAPKAPK5Q8IW41 473 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 TRIM35Q9UPQ4 493 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 MRPL11Q9Y3B7 192 aaKnown RBP13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 KDM5AP29375 1690 aaKnown RBP13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 LRRD1A4D1F6 860 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 TCP10Q12799 353 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 TRIM14Q14142 442 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 SNCBQ16143 134 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 GBP7Q8N8V2 638 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 DDX23Q9BUQ8 820 aaKnown RBP13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 TRIM4Q9C037 500 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 ODF2LQ9ULJ1 636 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 PAK2Q13177 524 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 SEPT14Q6ZU15 432 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 SND1Q7KZF4 910 aaKnown RBP eCLIP13.59□□□□□ -0.232e-7■■■■■ 27.3
PCDHGA6-201ENST00000517434 RPUSD2Q8IZ73 545 aaKnown RBP13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 TGFBRAP1Q8WUH2 860 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 GPR108Q9NPR9 543 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 ASAP1Q9ULH1 1129 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 IQGAP3Q86VI3 1631 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 E7EVH7 732 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 STRN3Q13033 797 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 CALCOCO2Q13137 446 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 MMRN2Q9H8L6 949 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 PRDM15P57071 1507 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 OSBPP22059 807 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 MARCKSP29966 332 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 FANCCQ00597 558 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 UBXN1Q04323 297 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 PALLDQ8WX93 1383 aa13.59□□□□□ -0.23
PCDHGA6-201ENST00000517434 CIAO1O76071 339 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 NONOQ15233 471 aaKnown RBP eCLIP13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 DBN1Q16643 649 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 SV2BQ7L1I2 683 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 CPXCR1Q8N123 301 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 CCDC24Q8N4L8 307 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 MCUR1Q96AQ8 359 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 MASTLQ96GX5 879 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 TNNQ9UQP3 1299 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 RABGAP1Q9Y3P9 1069 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 USH1CQ9Y6N9 552 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 SHROOM2Q13796 1616 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 ETF1P62495 437 aaKnown RBP13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 PLEKHM2Q8IWE5 1019 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 TACO1Q9BSH4 297 aaKnown RBP13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 ARHGEF35A5YM69 484 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 RFX1P22670 979 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 FNBP1Q96RU3 617 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 DSCC1Q9BVC3 393 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 ATP8A2Q9NTI2 1148 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZNF532Q9HCE3 1301 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 TET3O43151 1660 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 B4E1Z4 1266 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZYXQ15942 572 aaKnown RBP13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 IGSF22Q8N9C0 903 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 ARHGEF2Q92974 986 aaKnown RBP13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 JAKMIP2Q96AA8 810 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 TRIM6Q9C030 488 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 ATG3Q9NT62 314 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZBTB1Q9Y2K1 713 aa13.58□□□□□ -0.24
PCDHGA6-201ENST00000517434 SP4Q02446 784 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZBTB17Q13105 803 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 CIAPIN1Q6FI81 312 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 KIAA0825Q8IV33 1275 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 COMMD10Q9Y6G5 202 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 PPP1R7Q15435 360 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 CAPS2Q9BXY5 557 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 MYO3BQ8WXR4 1341 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 MYCLP12524 364 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 IREB2P48200 963 aaKnown RBP13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 CHRNDQ07001 517 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 APOBRQ0VD83 1088 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZKSCAN8Q15776 578 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 CERKLQ49MI3 558 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 FYB2Q5VWT5 728 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 TTLL7Q6ZT98 887 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 TMTC1Q8IUR5 882 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 CCDC170Q8IYT3 715 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 EXOC4Q96A65 974 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms