RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 DHX38Q92620 1227 aaKnown RBP5.32□□□□□ -1.56
RNU4-49P-201ENST00000516080 TOX2Q96NM4 488 aa5.32□□□□□ -1.56
RNU4-49P-201ENST00000516080 NSUN3Q9H649 340 aaKnown RBP5.32□□□□□ -1.56
RNU4-49P-201ENST00000516080 KBTBD4Q9NVX7 518 aa5.32□□□□□ -1.56
RNU4-49P-201ENST00000516080 RBM47A0AV96 593 aaKnown RBP5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 RBAK-RBAKDNI3L0D1 243 aa5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 LRRN2O75325 713 aa5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 GARTP22102 1010 aa5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 ZNF326Q5BKZ1 582 aaKnown RBP5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 ANKLE2Q86XL3 938 aa5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 LILRA2Q8N149 483 aa5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 BAHD1Q8TBE0 780 aaPredicted RBP5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 DIRC2Q96SL1 478 aa5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 LRRC3Q9BY71 257 aa5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 EPB41L4BQ9H329 900 aa5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 DCP1AQ9NPI6 582 aaPredicted RBP5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 KCNQ5Q9NR82 932 aa5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 SUPT16HQ9Y5B9 1047 aaKnown RBP5.31□□□□□ -1.56
RNU4-49P-201ENST00000516080 FITM1A5D6W6 292 aa5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 NFIBO00712 420 aa5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 RGS13O14921 159 aa5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 GBP1P32455 592 aa5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 ERVFC1P60507 584 aa5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 RNF4P78317 190 aa5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 CLEC16AQ2KHT3 1053 aa5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 FBXO27Q8NI29 283 aa5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 ENOX1Q8TC92 643 aaKnown RBP5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 KIF2CQ99661 725 aa5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 ASCC2Q9H1I8 757 aaPredicted RBP5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 PCDHA11Q9Y5I1 949 aa5.3□□□□□ -1.56
RNU4-49P-201ENST00000516080 TLR3O15455 904 aaKnown RBP5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 GREM1O60565 184 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 ATE1O95260 518 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 ZGLP1P0C6A0 271 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 TMEM253P0C7T8 217 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 EIF4A3P38919 411 aaKnown RBP5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 DUSP4Q13115 394 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 NR0B2Q15466 257 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 FBXL19Q6PCT2 694 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 SPPL2CQ8IUH8 684 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 ZSCAN18Q8TBC5 510 aaPredicted RBP5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 BCL2L13Q9BXK5 485 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 COPRSQ9NQ92 184 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 GMIPQ9P107 970 aa5.29□□□□□ -1.56
RNU4-49P-201ENST00000516080 SLC22A31A6NKX4 558 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 DNAJA2O60884 412 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 RAG1P15918 1043 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 CHRNEQ04844 493 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 RAD51AP2Q09MP3 1159 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 FBLN7Q53RD9 439 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 ARSHQ5FYA8 562 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 SPOCD1Q6ZMY3 1216 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 HS2ST1Q7LGA3 356 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 CILP2Q8IUL8 1156 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 SLC26A8Q96RN1 970 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 SLC6A17Q9H1V8 727 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 CWC22Q9HCG8 908 aaKnown RBP5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 BRMS1Q9HCU9 246 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 PCDHB14Q9Y5E9 798 aa5.28□□□□□ -1.56
RNU4-49P-201ENST00000516080 C1QTNF9P0C862 333 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 CFPP27918 469 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 TRHRP34981 398 aaPredicted RBP5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 TEKQ02763 1124 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 NMIQ13287 307 aaPredicted RBP5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 SNX17Q15036 470 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 RNF111Q6ZNA4 994 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 IRF2BP1Q8IU81 584 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 LRRC56Q8IYG6 542 aaPredicted RBP5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 ANKS4BQ8N8V4 417 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 SYTL5Q8TDW5 730 aaPredicted RBP5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 GIPC2Q8TF65 315 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 ZNF296Q8WUU4 475 aaPredicted RBP5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 VWCEQ96DN2 955 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 RNF32Q9H0A6 362 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 C19orf44Q9H6X5 657 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 EHMT1Q9H9B1 1298 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 SP110Q9HB58 689 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 GGT7Q9UJ14 662 aa5.27□□□□□ -1.57
RNU4-49P-201ENST00000516080 SHISA3A0PJX4 238 aa5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 UBOX5O94941 541 aa5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 KRT1P04264 644 aa5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 MED14OSP0DP75 135 aa5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 GLDCP23378 1020 aa5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 MRPL58Q14197 206 aaKnown RBP5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 CDCP2Q5VXM1 449 aa5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 SIAH1Q8IUQ4 282 aa5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 REXO1Q8N1G1 1221 aaKnown RBP5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 DAGLBQ8NCG7 672 aa5.26□□□□□ -1.57
RNU4-49P-201ENST00000516080 TCAF2A6NFQ2 919 aa5.25□□□□□ -1.57
RNU4-49P-201ENST00000516080 CCNFP41002 786 aa5.25□□□□□ -1.57
RNU4-49P-201ENST00000516080 APOBRQ0VD83 1088 aa5.25□□□□□ -1.57
RNU4-49P-201ENST00000516080 LRRFIP1Q32MZ4 808 aaKnown RBP5.25□□□□□ -1.57
RNU4-49P-201ENST00000516080 ZNF655Q8N720 491 aaPredicted RBP5.25□□□□□ -1.57
RNU4-49P-201ENST00000516080 LINC01599Q8WXQ3 324 aa5.25□□□□□ -1.57
RNU4-49P-201ENST00000516080 KCNN1Q92952 543 aa5.25□□□□□ -1.57
RNU4-49P-201ENST00000516080 CNNM2Q9H8M5 875 aa5.25□□□□□ -1.57
RNU4-49P-201ENST00000516080 ADAMTS1Q9UHI8 967 aa5.25□□□□□ -1.57
RNU4-49P-201ENST00000516080 YBX2Q9Y2T7 364 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms