RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 UTP14AQ9BVJ6 771 aaKnown RBP8.21□□□□□ -1.1
SRPK1-213ENST00000513367 ARHGAP39Q9C0H5 1083 aa8.21□□□□□ -1.1
SRPK1-213ENST00000513367 RRP7AQ9Y3A4 280 aaKnown RBP8.21□□□□□ -1.1
SRPK1-213ENST00000513367 PRUNE2Q8WUY3 3088 aa8.21□□□□□ -1.1
SRPK1-213ENST00000513367 PSME4Q14997 1843 aa8.21□□□□□ -1.1
SRPK1-213ENST00000513367 CEMIPQ8WUJ3 1361 aa8.21□□□□□ -1.1
SRPK1-213ENST00000513367 FARP2O94887 1054 aaPredicted RBP8.2□□□□□ -1.1
SRPK1-213ENST00000513367 GJB1P08034 283 aa8.2□□□□□ -1.1
SRPK1-213ENST00000513367 MYL6BP14649 208 aa8.2□□□□□ -1.1
SRPK1-213ENST00000513367 MBTPS1Q14703 1052 aa8.2□□□□□ -1.1
SRPK1-213ENST00000513367 PARP10Q53GL7 1025 aa8.2□□□□□ -1.1
SRPK1-213ENST00000513367 GAS2L2Q8NHY3 880 aa8.2□□□□□ -1.1
SRPK1-213ENST00000513367 FAM161BQ96MY7 647 aa8.2□□□□□ -1.1
SRPK1-213ENST00000513367 GMLQ99445 158 aa8.2□□□□□ -1.1
SRPK1-213ENST00000513367 ZC3H12CQ9C0D7 883 aaKnown RBP8.2□□□□□ -1.1
SRPK1-213ENST00000513367 STARD13Q9Y3M8 1113 aa8.2□□□□□ -1.1
SRPK1-213ENST00000513367 IRS2Q9Y4H2 1338 aa8.2□□□□□ -1.1
SRPK1-213ENST00000513367 TMEM265A0A087WTH1 108 aa8.19□□□□□ -1.1
SRPK1-213ENST00000513367 CCL5P13501 91 aa8.19□□□□□ -1.1
SRPK1-213ENST00000513367 NR1H3Q13133 447 aa8.19□□□□□ -1.1
SRPK1-213ENST00000513367 ADGRE1Q14246 886 aa8.19□□□□□ -1.1
SRPK1-213ENST00000513367 TAF1CQ15572 869 aaPredicted RBP8.19□□□□□ -1.1
SRPK1-213ENST00000513367 TMC4Q7Z404 712 aa8.19□□□□□ -1.1
SRPK1-213ENST00000513367 TBC1D16Q8TBP0 767 aa8.19□□□□□ -1.1
SRPK1-213ENST00000513367 ZMYND8Q9ULU4 1186 aaPredicted RBP8.19□□□□□ -1.1
SRPK1-213ENST00000513367 WNT10BO00744 389 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 SASH1O94885 1247 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 ALBP02768 609 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 NID1P14543 1247 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 SELPP16109 830 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 ALAS2P22557 587 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 MCCD1P59942 119 aaPredicted RBP8.18□□□□□ -1.1
SRPK1-213ENST00000513367 ARSJQ5FYB0 599 aaPredicted RBP8.18□□□□□ -1.1
SRPK1-213ENST00000513367 SYT9Q86SS6 491 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 TDHQ8IZJ6 230 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 C1orf216Q8TAB5 229 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 CELF1Q92879 486 aaKnown RBP8.18□□□□□ -1.1
SRPK1-213ENST00000513367 RNF208Q9H0X6 261 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 PANK3Q9H999 370 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 ZFYVE28Q9HCC9 887 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 COL4A1P02462 1669 aa8.18□□□□□ -1.1
SRPK1-213ENST00000513367 DIAPH1O60610 1272 aaKnown RBP8.17□□□□□ -1.1
SRPK1-213ENST00000513367 FAM157BP0CG42 384 aa8.17□□□□□ -1.1
SRPK1-213ENST00000513367 KIF22Q14807 665 aa8.17□□□□□ -1.1
SRPK1-213ENST00000513367 C7orf61Q8IZ16 206 aa8.17□□□□□ -1.1
SRPK1-213ENST00000513367 U2AF1L4Q8WU68 220 aaKnown RBP8.17□□□□□ -1.1
SRPK1-213ENST00000513367 ZNF428Q96B54 188 aa8.17□□□□□ -1.1
SRPK1-213ENST00000513367 MXD3Q9BW11 206 aa8.17□□□□□ -1.1
SRPK1-213ENST00000513367 MARK1Q9P0L2 795 aa8.17□□□□□ -1.1
SRPK1-213ENST00000513367 BIN2Q9UBW5 565 aaPredicted RBP8.17□□□□□ -1.1
SRPK1-213ENST00000513367 LAMA2P24043 3122 aaKnown RBP8.16□□□□□ -1.1
SRPK1-213ENST00000513367 PPP1R12BO60237 982 aaPredicted RBP8.16□□□□□ -1.1
SRPK1-213ENST00000513367 SYN1P17600 705 aa8.16□□□□□ -1.1
SRPK1-213ENST00000513367 GRK4P32298 578 aa8.16□□□□□ -1.1
SRPK1-213ENST00000513367 MAGEA10P43363 369 aaPredicted RBP8.16□□□□□ -1.1
SRPK1-213ENST00000513367 LACTBP83111 547 aaPredicted RBP8.16□□□□□ -1.1
SRPK1-213ENST00000513367 MAP3K12Q12852 859 aa8.16□□□□□ -1.1
SRPK1-213ENST00000513367 MAP3K11Q16584 847 aa8.16□□□□□ -1.1
SRPK1-213ENST00000513367 TSGA10IPQ3SY00 556 aa8.16□□□□□ -1.1
SRPK1-213ENST00000513367 MCM10Q7L590 875 aa8.16□□□□□ -1.1
SRPK1-213ENST00000513367 MICALL1Q8N3F8 863 aa8.16□□□□□ -1.1
SRPK1-213ENST00000513367 MAFAQ8NHW3 353 aaPredicted RBP8.16□□□□□ -1.1
SRPK1-213ENST00000513367 FAM117AQ9C073 453 aa8.16□□□□□ -1.1
SRPK1-213ENST00000513367 MIS18AQ9NYP9 233 aa8.16□□□□□ -1.1
SRPK1-213ENST00000513367 USP17L3A6NCW0 530 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 USP17L4A6NCW7 530 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 C9orf172C9J069 976 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 U2SURPO15042 1029 aaKnown RBP8.15□□□□□ -1.1
SRPK1-213ENST00000513367 EFSO43281 561 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 UFL1O94874 794 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 SGPL1O95470 568 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 TFRCP02786 760 aaKnown RBP8.15□□□□□ -1.1
SRPK1-213ENST00000513367 PRMT2P55345 433 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 FAM109BQ6ICB4 259 aaPredicted RBP8.15□□□□□ -1.1
SRPK1-213ENST00000513367 USP17L1Q7RTZ2 530 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 APOBEC3FQ8IUX4 373 aaKnown RBP8.15□□□□□ -1.1
SRPK1-213ENST00000513367 FAM43AQ8N2R8 423 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 OGFOD1Q8N543 542 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 RAET1EQ8TD07 263 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 BRI3BPQ8WY22 251 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 TP53INP1Q96A56 240 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 UBE2OQ9C0C9 1292 aaKnown RBP8.15□□□□□ -1.1
SRPK1-213ENST00000513367 TRMT112Q9UI30 125 aaKnown RBP8.15□□□□□ -1.1
SRPK1-213ENST00000513367 RIPOR2Q9Y4F9 1068 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 MUC3AQ02505 3323 aa8.15□□□□□ -1.1
SRPK1-213ENST00000513367 SSC5DA1L4H1 1573 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 CCL15-CCL14A0A0B4J2E2 113 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 ADARB2-AS1A8MUL3 147 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 PAX4O43316 350 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 ELNP15502 786 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 CTGFP29279 349 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 UBXN2AP68543 259 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 DCTN1Q14203 1278 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 CCL15Q16663 113 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 TXNRD3Q86VQ6 643 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 NLRP10Q86W26 655 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 ZNF295-AS1Q8N0V1 137 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 OPTNQ96CV9 577 aa8.14□□□□□ -1.11
SRPK1-213ENST00000513367 PAWRQ96IZ0 340 aaKnown RBP8.14□□□□□ -1.11
SRPK1-213ENST00000513367 PHACTR3Q96KR7 559 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms