RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CDC37L1Q7L3B6 337 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 RSRC2Q7L4I2 434 aaKnown RBP5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 PIGBQ92521 554 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 DCAF5Q96JK2 942 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 DNAJC7Q99615 494 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 MKNK1Q9BUB5 465 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 SAGE1Q9NXZ1 904 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 MKL2Q9ULH7 1088 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 USP17L5A8MUK1 530 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 RASGRP1O95267 797 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 TPM3P06753 285 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 COPAP53621 1224 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 HSD17B7P56937 341 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 RIPK4P57078 832 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 FMR1Q06787 632 aaKnown RBP eCLIP5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 CCDC15Q0P6D6 951 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 PAK2Q13177 524 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 HLTFQ14527 1009 aaKnown RBP eCLIP5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 MLC1Q15049 377 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 COBLL1Q53SF7 1204 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 ZC3H12BQ5HYM0 836 aaKnown RBP5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 PNMA8AQ86V59 439 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 IL17REQ8NFR9 667 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 WDR66Q8TBY9 1149 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 MS4A4AQ96JQ5 239 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 PRIMPOLQ96LW4 560 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 ZNF396Q96N95 335 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 PLEKHF1Q96S99 279 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 SRA1Q9HD15 236 aaKnown RBP5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 SMC4Q9NTJ3 1288 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 SIRPGQ9P1W8 387 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 ITM2BQ9Y287 266 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 PCDHB15Q9Y5E8 787 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 MAP3K5Q99683 1374 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 PSDA5PKW4 1024 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 CCDC159P0C7I6 412 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 NEFHP12036 1026 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 DIXDC1Q155Q3 683 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 UBR7Q8N806 425 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 HNRNPLLQ8WVV9 542 aaKnown RBP5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 SPIRE2Q8WWL2 714 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 PPP4R2Q9NY27 417 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 LEMD3Q9Y2U8 911 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 DOT1LQ8TEK3 1739 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 SHANK3Q9BYB0 1731 aa5.8□□□□□ -1.48
TRAPPC11-208ENST00000511955 KDM6AO15550 1401 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 TTLL13PA6NNM8 815 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 HAX1O00165 279 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 RNMTO43148 476 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 TREHO43280 583 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 LGR5O75473 907 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 SKIP12755 728 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 ETFBP38117 255 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 GJA8P48165 433 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 PICALMQ13492 652 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 SMIM5Q71RC9 77 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 HERPUD2Q9BSE4 406 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 NUCKS1Q9H1E3 243 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 FBXO10Q9UK96 956 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 CPLX1O14810 134 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 SLC5A1P13866 664 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 HPDP32754 393 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 TMPOP42166 694 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 UBASH3AP57075 661 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 DPYDQ12882 1025 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 SQSTM1Q13501 440 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 RSBN1LQ6PCB5 846 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 NFXL1Q6ZNB6 911 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 C16orf86Q6ZW13 317 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 KRT26Q7Z3Y9 468 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 ANKMY2Q8IV38 441 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 STAG2Q8N3U4 1231 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 GIMAP8Q8ND71 665 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 C1orf216Q8TAB5 229 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 GABPB2Q8TAK5 448 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 SYAP1Q96A49 352 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 ZHX1Q9UKY1 873 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 TPCN1Q9ULQ1 816 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 PCDHGB3Q9Y5G1 929 aa5.79□□□□□ -1.48
TRAPPC11-208ENST00000511955 PKD1L3Q7Z443 1732 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 PALLDQ8WX93 1383 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 FAM170AA1A519 330 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 TRIM64A6NGJ6 449 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 TRIM64BA6NI03 449 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 VSTM5A8MXK1 200 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 ZNF853P0CG23 659 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 ENPP1P22413 925 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 PLA2G4AP47712 749 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 FOXK1P85037 733 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 CTDSPL2Q05D32 466 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 CHAF1AQ13111 956 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 TXNRD1Q16881 649 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 CDCA2Q69YH5 1023 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 KCT2Q8NC54 265 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 MGARPQ8TDB4 240 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 RTFDC1Q9BY42 306 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 CSRNP2Q9H175 543 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 RWDD1Q9H446 243 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms