RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 PCCAP05165 728 aaPredicted RBP16.73■□□□□ 0.27
USP38-202ENST00000510377 IFNAR1P17181 557 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 MCM9Q9NXL9 1143 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 SAR1BQ9Y6B6 198 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 ANKARQ7Z5J8 1434 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 FAM170AA1A519 330 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 HSF2BPO75031 334 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 REXO1L1PQ8IX06 675 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 GOLGA5Q8TBA6 731 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 MRFAP1Q9Y605 127 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 ZPR1O75312 459 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 PTPREP23469 700 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 ACTN2P35609 894 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 COPB1P53618 953 aaKnown RBP16.72■□□□□ 0.27
USP38-202ENST00000510377 ANKRD13CQ8N6S4 541 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 OR8K1Q8NGG5 319 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 NOC4LQ9BVI4 516 aaKnown RBP16.72■□□□□ 0.27
USP38-202ENST00000510377 ERCC5P28715 1186 aaPredicted RBP16.72■□□□□ 0.27
USP38-202ENST00000510377 NOP2P46087 812 aaKnown RBP16.72■□□□□ 0.27
USP38-202ENST00000510377 RASGRP4Q8TDF6 673 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 ATRIPQ8WXE1 791 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 SEPT11Q9NVA2 429 aaKnown RBP16.72■□□□□ 0.27
USP38-202ENST00000510377 GOLGA6CA6NDK9 693 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 GOLGA6DP0CG33 693 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 PDE4DQ08499 809 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 IKQ13123 557 aaPredicted RBP16.72■□□□□ 0.27
USP38-202ENST00000510377 CASP8Q14790 479 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 LETM2Q2VYF4 491 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 CEP89Q96ST8 783 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 GOLGA6AQ9NYA3 693 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.72■□□□□ 0.27
USP38-202ENST00000510377 SEC63Q9UGP8 760 aaKnown RBP16.72■□□□□ 0.27
USP38-202ENST00000510377 TECPR2O15040 1411 aa16.72■□□□□ 0.27
USP38-202ENST00000510377 TRIM66O15016 1216 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 SRGAP2O75044 1071 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 STRBPQ96SI9 672 aaKnown RBP16.71■□□□□ 0.27
USP38-202ENST00000510377 PYM1Q9BRP8 204 aaKnown RBP16.71■□□□□ 0.27
USP38-202ENST00000510377 UBA5Q9GZZ9 404 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 ADGRG1Q9Y653 693 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 TMCO5BA8MYB1 307 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 ATP8B1O43520 1251 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 CDR1P51861 262 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 WHAMMP3Q1A5X7 153 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 TC2NQ8N9U0 490 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 PALLDQ8WX93 1383 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 CALML4Q96GE6 196 aa16.71■□□□□ 0.27
USP38-202ENST00000510377 CRNKL1Q9BZJ0 848 aaKnown RBP16.71■□□□□ 0.27
USP38-202ENST00000510377 FOXP1Q9H334 677 aaPredicted RBP16.71■□□□□ 0.27
USP38-202ENST00000510377 FAM207AQ9NSI2 230 aaPredicted RBP16.71■□□□□ 0.27
USP38-202ENST00000510377 BMP2KQ9NSY1 1161 aaPredicted RBP16.71■□□□□ 0.26
USP38-202ENST00000510377 TUBE1Q9UJT0 475 aa16.71■□□□□ 0.26
USP38-202ENST00000510377 USP17L12C9JPN9 530 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 USP17L21D6R901 530 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 MYO1CO00159 1063 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 GYG1P46976 350 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 CRACR2BQ8N4Y2 399 aaPredicted RBP16.7■□□□□ 0.26
USP38-202ENST00000510377 GPKOWQ92917 476 aaPredicted RBP eCLIP16.7■□□□□ 0.26
USP38-202ENST00000510377 PAGE5Q96GU1 130 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 LY9Q9HBG7 655 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 GOLGA6BA6NDN3 693 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 FAM114A1Q8IWE2 563 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 SEC31BQ9NQW1 1179 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 SRPRBQ9Y5M8 271 aaKnown RBP16.7■□□□□ 0.26
USP38-202ENST00000510377 HEG1Q9ULI3 1381 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 NAPAP54920 295 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 TYW1BQ6NUM6 668 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 ANKRD18AQ8IVF6 992 aa16.7■□□□□ 0.26
USP38-202ENST00000510377 GSPT2Q8IYD1 628 aaKnown RBP16.7■□□□□ 0.26
USP38-202ENST00000510377 AATFQ9NY61 560 aaKnown RBP eCLIP16.7■□□□□ 0.26
USP38-202ENST00000510377 MFAP3LO75121 409 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 CYP27A1Q02318 531 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 KRT31Q15323 416 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 HLFQ16534 295 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 RAD9BQ6WBX8 426 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 EXOC4Q96A65 974 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 GDAQ9Y2T3 454 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 TFRCP02786 760 aaKnown RBP16.69■□□□□ 0.26
USP38-202ENST00000510377 MAP3K9P80192 1104 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 RFX7Q2KHR2 1363 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 TUBBP07437 444 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 TUBB4BP68371 445 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 SPTY2D1Q68D10 685 aaPredicted RBP16.69■□□□□ 0.26
USP38-202ENST00000510377 HDAC6Q9UBN7 1215 aa16.69■□□□□ 0.26
USP38-202ENST00000510377 RNF40O75150 1001 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 RASGRF1Q13972 1273 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 TAX1BP1Q86VP1 789 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 ADGRL3Q9HAR2 1447 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 NCAPD2Q15021 1401 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 TSPY3P0CV98 308 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 TSPY8P0CW00 308 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 CALM1P0DP23 149 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 CALM2P0DP24 149 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 CALM3P0DP25 149 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 CALML3P27482 149 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 TRIM14Q14142 442 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 TCERG1LQ5VWI1 586 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms