RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 ATP2B2Q01814 1243 aa14.61□□□□□ -0.07
LYSMD3-204ENST00000509384 DNM1Q05193 864 aaKnown RBP14.61□□□□□ -0.07
LYSMD3-204ENST00000509384 GPR162Q16538 588 aa14.61□□□□□ -0.07
LYSMD3-204ENST00000509384 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
LYSMD3-204ENST00000509384 KANSL2Q9H9L4 492 aa14.61□□□□□ -0.07
LYSMD3-204ENST00000509384 CABP5Q9NP86 173 aa14.61□□□□□ -0.07
LYSMD3-204ENST00000509384 MAD2L2Q9UI95 211 aa14.61□□□□□ -0.07
LYSMD3-204ENST00000509384 ASTN2O75129 1339 aaPredicted RBP14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 TBC1D12O60347 775 aa14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 DDNO94850 711 aaPredicted RBP14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 GH2P01242 217 aa14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 PARP1P09874 1014 aaKnown RBP14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 LMOD1P29536 600 aaPredicted RBP14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 KRT85P78386 507 aa14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 ICA1Q05084 483 aa14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 SHROOM1Q2M3G4 852 aaPredicted RBP14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 KRT40Q6A162 431 aa14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 STAG2Q8N3U4 1231 aa14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 TRPM4Q8TD43 1214 aa14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 LZTS2Q9BRK4 669 aa14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 GJB4Q9NTQ9 266 aa14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 RBM27Q9P2N5 1060 aaKnown RBP14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 CNPY2Q9Y2B0 182 aa14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 V9GY48 417 aaPredicted RBP14.6□□□□□ -0.07
LYSMD3-204ENST00000509384 PALM3A6NDB9 673 aaPredicted RBP14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 PRPF40AO75400 957 aaKnown RBP14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 PDHBP11177 359 aa14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 XBP1P17861 261 aa14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 EPS15P42566 896 aa14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 SEPT2Q15019 361 aa14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 CSPP1Q1MSJ5 1256 aa14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 FAM173BQ6P4H8 233 aa14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 APOBEC3FQ8IUX4 373 aaKnown RBP14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 NYAP2Q9P242 653 aa14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 PGAP2Q9UHJ9 254 aa14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 SCAF8Q9UPN6 1271 aaKnown RBP14.59□□□□□ -0.07
LYSMD3-204ENST00000509384 UTRNP46939 3433 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 hCG_1642624A0A1W2PR95 340 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 USP17L5A8MUK1 530 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 FIBPO43427 364 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 TRAK2O60296 914 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 GOLGA8HP0CJ92 632 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 EEF2P13639 858 aaKnown RBP14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 KIF23Q02241 960 aaPredicted RBP14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 GNL2Q13823 731 aaKnown RBP14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 PKN1Q16512 942 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 ASPRV1Q53RT3 343 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 L1TD1Q5T7N2 865 aaKnown RBP14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 USP17L2Q6R6M4 530 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 MIGA2Q7L4E1 593 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 RASGRP2Q7LDG7 609 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 DEFB129Q9H1M3 183 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 GDPD2Q9HCC8 539 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 LMBRD1Q9NUN5 540 aa14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 DICER1Q9UPY3 1922 aaKnown RBP14.58□□□□□ -0.08
LYSMD3-204ENST00000509384 KLRF2D3W0D1 207 aa14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 GRIN3BO60391 1043 aa14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 RRP1BQ14684 758 aaKnown RBP14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 SAFBQ15424 915 aaKnown RBP eCLIP14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 SKOR2Q2VWA4 1001 aaPredicted RBP14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 ANGEL2Q5VTE6 544 aaKnown RBP14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 BRAPQ7Z569 592 aa14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 TMEM87AQ8NBN3 555 aa14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 TEPSINQ96N21 525 aa14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 GGA3Q9NZ52 723 aa14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 ISY1Q9ULR0 285 aaKnown RBP14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 GREB1LQ9C091 1923 aaPredicted RBP14.57□□□□□ -0.08
LYSMD3-204ENST00000509384 MMP1P03956 469 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 SNHG28P0DPA3 235 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 SCG2P13521 617 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 YY1P25490 414 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 JAG1P78504 1218 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 MAP3K10Q02779 954 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 PFKFB3Q16875 520 aaPredicted RBP14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 USP48Q86UV5 1035 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 PIBF1Q8WXW3 757 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 MKL1Q969V6 931 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 SPZ1Q9BXG8 430 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 ADARB2Q9NS39 739 aaKnown RBP14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 ZBTB21Q9ULJ3 1066 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 MYH8P13535 1937 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 FRMPD2Q68DX3 1309 aaPredicted RBP14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 SBF1O95248 1867 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 KIF28PB7ZC32 967 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 ZNF543Q08ER8 600 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 CCDC96Q2M329 555 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 ATL3Q6DD88 541 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 DPY19L2Q6NUT2 758 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 ZNF396Q96N95 335 aaPredicted RBP14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 SCAND2PQ9GZW5 306 aaPredicted RBP14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 VPS54Q9P1Q0 977 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 KCNJ14Q9UNX9 436 aa14.56□□□□□ -0.08
LYSMD3-204ENST00000509384 ZC3H4Q9UPT8 1303 aaKnown RBP14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 CYTH3O43739 400 aa14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 RAD21O60216 631 aa14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 SMARCA1P28370 1054 aa14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 CAP2P40123 477 aa14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 HIRAP54198 1017 aaPredicted RBP14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 GPATCH4Q5T3I0 446 aaKnown RBP14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 SIAH1Q8IUQ4 282 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms