RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 MYPNQ86TC9 1320 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 EPB41P11171 864 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 BDNFP23560 247 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 ZNF165P49910 485 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 POU5F1Q01860 360 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 SUZ12Q15022 739 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 ACCSLQ4AC99 568 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 NANOGNBQ7Z5D8 188 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 ERICH1Q86X53 443 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 HOMER1Q86YM7 354 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 SYT2Q8N9I0 419 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 LRRC45Q96CN5 670 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 IFT43Q96FT9 208 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 TTC14Q96N46 770 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 NOD2Q9HC29 1040 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 VCX3AQ9NNX9 186 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 KDM6BO15054 1643 aa12.06□□□□□ -0.48
PDLIM5-210ENST00000508216 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 A0A1B0GVG6 124 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 BECN2A8MW95 431 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 NDUFAB1O14561 156 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 MYO1EQ12965 1108 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 CAMK2BQ13554 666 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 MAP7Q14244 749 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 INTS3Q68E01 1043 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 ZMAT2Q96NC0 199 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 SLAIN2Q9P270 581 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 CARD8Q9Y2G2 431 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 CFAP69A5D8W1 941 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 GOLGA8KD6RF30 607 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 FANCGO15287 622 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 SART1O43290 800 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 MGEA5O60502 916 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 STAM2O75886 525 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 GSTA2P09210 222 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 CA8P35219 290 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 KRT9P35527 623 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 CHMP4BP1P59074 171 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 TMCO4Q5TGY1 634 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 PI16Q6UXB8 463 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 EXOC3L1Q86VI1 746 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 PPP1R14CQ8TAE6 165 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 SPATA32Q96LK8 384 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 CCDC68Q9H2F9 335 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 SEL1LQ9UBV2 794 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 SSX2IPQ9Y2D8 614 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 EFR3BQ9Y2G0 817 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 MED14O60244 1454 aa12.05□□□□□ -0.48
PDLIM5-210ENST00000508216 IQGAP2Q13576 1575 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 HECW2Q9P2P5 1572 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 KIF24Q5T7B8 1368 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 PIK3R4Q99570 1358 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 WNT7AO00755 349 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 FLOT1O75955 427 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 ANP32DO95626 131 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 ALDH2P05091 517 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 ZSCAN22P10073 491 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 HSPA4P34932 840 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 GSTM4Q03013 218 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 PPIDQ08752 370 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 CFAP157Q5JU67 520 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 NEPROQ6NW34 567 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 UBE2Q1Q7Z7E8 422 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 HOOK3Q86VS8 718 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 SLC7A5P1Q8MH63 180 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 PDILTQ8N807 584 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 UHMK1Q8TAS1 419 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 NDNQ99608 321 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 FAM192AQ9GZU8 254 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 TAOK3Q9H2K8 898 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 DCTPP1Q9H773 170 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 HPCAL4Q9UM19 191 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 ADGRL3Q9HAR2 1447 aa12.04□□□□□ -0.48
PDLIM5-210ENST00000508216 HTR3EA5X5Y0 456 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 TRIM64CA6NLI5 447 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 CUTAO60888 179 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 SFPQP23246 707 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 ARID5BQ14865 1188 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 MAP7D1Q3KQU3 841 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 ADALQ6DHV7 355 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 GIGYF2Q6Y7W6 1299 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 DZIP1LQ8IYY4 767 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 ARHGAP18Q8N392 663 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 AZIN2Q96A70 460 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 KIFC2Q96AC6 838 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 NAF1Q96HR8 494 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 CENPHQ9H3R5 247 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 MKS1Q9NXB0 559 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 C6orf203Q9P0P8 240 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 NUP160Q12769 1436 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 SUPT6HQ7KZ85 1726 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 ADGBQ8N7X0 1667 aa12.03□□□□□ -0.48
PDLIM5-210ENST00000508216 SSH2Q76I76 1423 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 FAM25EA8MYX2 175 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms