RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 NR2E3Q9Y5X4 410 aa26.73■■□□□ 1.87
SUDS3P1-201ENST00000505831 PRKAR2AP13861 404 aaKnown RBP26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 AKR1B1P15121 316 aa26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 CDK8P49336 464 aa26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 CACNB2Q08289 660 aaPredicted RBP26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 COG2Q14746 738 aa26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 NECAB2Q7Z6G3 386 aa26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 DIS3LQ8TF46 1054 aaKnown RBP26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 CCDC17Q96LX7 622 aa26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 HOXC10Q9NYD6 342 aa26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 TMX2Q9Y320 296 aa26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 DNAH12Q6ZR08 3092 aa26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 ZNF236Q9UL36 1845 aa26.72■■□□□ 1.87
SUDS3P1-201ENST00000505831 MYH4Q9Y623 1939 aa26.71■■□□□ 1.87
SUDS3P1-201ENST00000505831 PTPREP23469 700 aa26.71■■□□□ 1.87
SUDS3P1-201ENST00000505831 C16orf86Q6ZW13 317 aa26.71■■□□□ 1.87
SUDS3P1-201ENST00000505831 STRBPQ96SI9 672 aaKnown RBP26.71■■□□□ 1.87
SUDS3P1-201ENST00000505831 APBA2Q99767 749 aa26.71■■□□□ 1.87
SUDS3P1-201ENST00000505831 SLC4A4Q9Y6R1 1079 aa26.71■■□□□ 1.87
SUDS3P1-201ENST00000505831 SMCHD1A6NHR9 2005 aa26.71■■□□□ 1.87
SUDS3P1-201ENST00000505831 SLC15A5A6NIM6 579 aa26.7■■□□□ 1.86
SUDS3P1-201ENST00000505831 GLRX3O76003 335 aaKnown RBP26.7■■□□□ 1.86
SUDS3P1-201ENST00000505831 ZKSCAN1P17029 563 aaPredicted RBP26.7■■□□□ 1.86
SUDS3P1-201ENST00000505831 CTR9Q6PD62 1173 aa26.7■■□□□ 1.86
SUDS3P1-201ENST00000505831 CHRDL2Q6WN34 429 aa26.7■■□□□ 1.86
SUDS3P1-201ENST00000505831 IGHA2P01877 340 aa26.69■■□□□ 1.86
SUDS3P1-201ENST00000505831 HOXC6P09630 235 aa26.69■■□□□ 1.86
SUDS3P1-201ENST00000505831 KBTBD3Q8NAB2 608 aa26.69■■□□□ 1.86
SUDS3P1-201ENST00000505831 LPAR1Q92633 364 aa26.69■■□□□ 1.86
SUDS3P1-201ENST00000505831 EVI5O60447 810 aa26.68■■□□□ 1.86
SUDS3P1-201ENST00000505831 GRB14Q14449 540 aa26.68■■□□□ 1.86
SUDS3P1-201ENST00000505831 LHX8Q68G74 356 aa26.68■■□□□ 1.86
SUDS3P1-201ENST00000505831 CLEC10AQ8IUN9 316 aa26.68■■□□□ 1.86
SUDS3P1-201ENST00000505831 FLRT1Q9NZU1 646 aa26.68■■□□□ 1.86
SUDS3P1-201ENST00000505831 RBM27Q9P2N5 1060 aaKnown RBP26.68■■□□□ 1.86
SUDS3P1-201ENST00000505831 PCDHB15Q9Y5E8 787 aa26.68■■□□□ 1.86
SUDS3P1-201ENST00000505831 PLXNA1Q9UIW2 1896 aa26.68■■□□□ 1.86
SUDS3P1-201ENST00000505831 SBK1Q52WX2 424 aa26.67■■□□□ 1.86
SUDS3P1-201ENST00000505831 NBPF3Q9H094 633 aa26.67■■□□□ 1.86
SUDS3P1-201ENST00000505831 ARHGEF10LQ9HCE6 1279 aa26.67■■□□□ 1.86
SUDS3P1-201ENST00000505831 GSG1L2A8MUP6 293 aa26.66■■□□□ 1.86
SUDS3P1-201ENST00000505831 CCND3P30281 292 aaPredicted RBP26.66■■□□□ 1.86
SUDS3P1-201ENST00000505831 DSG3P32926 999 aa26.66■■□□□ 1.86
SUDS3P1-201ENST00000505831 ICA1Q05084 483 aa26.66■■□□□ 1.86
SUDS3P1-201ENST00000505831 AMOTL1Q8IY63 956 aa26.66■■□□□ 1.86
SUDS3P1-201ENST00000505831 OSBP2Q969R2 916 aa26.66■■□□□ 1.86
SUDS3P1-201ENST00000505831 DDRGK1Q96HY6 314 aa26.66■■□□□ 1.86
SUDS3P1-201ENST00000505831 MOV10L1Q9BXT6 1211 aaKnown RBP26.66■■□□□ 1.86
SUDS3P1-201ENST00000505831 VCPKMTQ9H867 229 aa26.66■■□□□ 1.86
SUDS3P1-201ENST00000505831 LAMA3Q16787 3333 aa26.65■■□□□ 1.86
SUDS3P1-201ENST00000505831 TSHZ3Q63HK5 1081 aa26.65■■□□□ 1.86
SUDS3P1-201ENST00000505831 GIMAP6Q6P9H5 292 aa26.65■■□□□ 1.86
SUDS3P1-201ENST00000505831 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.65■■□□□ 1.86
SUDS3P1-201ENST00000505831 TANGO6Q9C0B7 1094 aa26.65■■□□□ 1.86
SUDS3P1-201ENST00000505831 RNF113AO15541 343 aaKnown RBP26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 MB21D1Q8N884 522 aa26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 SHCBP1Q8NEM2 672 aa26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 NPLOC4Q8TAT6 608 aa26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 APPBP2Q92624 585 aa26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 GPATCH3Q96I76 525 aa26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 SPATC1LQ9H0A9 340 aa26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 SH2D4AQ9H788 454 aa26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 KANSL2Q9H9L4 492 aa26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 CWC22Q9HCG8 908 aaKnown RBP26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 ARPP21Q9UBL0 812 aaPredicted RBP26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 ADAMTS5Q9UNA0 930 aa26.64■■□□□ 1.86
SUDS3P1-201ENST00000505831 STRNO43815 780 aa26.63■■□□□ 1.85
SUDS3P1-201ENST00000505831 EEF2P13639 858 aaKnown RBP26.63■■□□□ 1.85
SUDS3P1-201ENST00000505831 WDR78Q5VTH9 848 aa26.63■■□□□ 1.85
SUDS3P1-201ENST00000505831 SPICE1Q8N0Z3 855 aa26.63■■□□□ 1.85
SUDS3P1-201ENST00000505831 C11orf49Q9H6J7 331 aa26.63■■□□□ 1.85
SUDS3P1-201ENST00000505831 IVNS1ABPQ9Y6Y0 642 aa26.63■■□□□ 1.85
SUDS3P1-201ENST00000505831 ZFYP08048 801 aaPredicted RBP26.62■■□□□ 1.85
SUDS3P1-201ENST00000505831 COL6A1P12109 1028 aa26.62■■□□□ 1.85
SUDS3P1-201ENST00000505831 WDR46O15213 610 aaKnown RBP26.61■■□□□ 1.85
SUDS3P1-201ENST00000505831 MFSD14CQ5VZR4 134 aa26.61■■□□□ 1.85
SUDS3P1-201ENST00000505831 ATG4CQ96DT6 458 aa26.61■■□□□ 1.85
SUDS3P1-201ENST00000505831 PFASO15067 1338 aa26.61■■□□□ 1.85
SUDS3P1-201ENST00000505831 TTC41PQ6P2S7 1318 aa26.61■■□□□ 1.85
SUDS3P1-201ENST00000505831 ROBO3Q96MS0 1386 aa26.6■■□□□ 1.85
SUDS3P1-201ENST00000505831 FLOT1O75955 427 aa26.6■■□□□ 1.85
SUDS3P1-201ENST00000505831 ERCC3P19447 782 aa26.6■■□□□ 1.85
SUDS3P1-201ENST00000505831 PI4K2BQ8TCG2 481 aa26.6■■□□□ 1.85
SUDS3P1-201ENST00000505831 RASA1P20936 1047 aa26.59■■□□□ 1.85
SUDS3P1-201ENST00000505831 ATP2B2Q01814 1243 aa26.59■■□□□ 1.85
SUDS3P1-201ENST00000505831 MROH8Q9H579 483 aa26.59■■□□□ 1.85
SUDS3P1-201ENST00000505831 EPB41L4AQ9HCS5 686 aaPredicted RBP26.59■■□□□ 1.85
SUDS3P1-201ENST00000505831 GPAA1O43292 621 aa26.58■■□□□ 1.85
SUDS3P1-201ENST00000505831 ADORA2AP29274 412 aa26.58■■□□□ 1.85
SUDS3P1-201ENST00000505831 ABRAQ8N0Z2 381 aa26.58■■□□□ 1.85
SUDS3P1-201ENST00000505831 TRPV1Q8NER1 839 aa26.58■■□□□ 1.85
SUDS3P1-201ENST00000505831 OTUD7AQ8TE49 926 aaPredicted RBP26.58■■□□□ 1.85
SUDS3P1-201ENST00000505831 A0A1W2PPC1 479 aa26.57■■□□□ 1.84
SUDS3P1-201ENST00000505831 M0R2C6 588 aa26.57■■□□□ 1.84
SUDS3P1-201ENST00000505831 COBLO75128 1261 aa26.57■■□□□ 1.84
SUDS3P1-201ENST00000505831 GNAT2P19087 354 aa26.57■■□□□ 1.84
SUDS3P1-201ENST00000505831 CYP2C19P33261 490 aa26.57■■□□□ 1.84
SUDS3P1-201ENST00000505831 TMEM132BQ14DG7 1078 aa26.57■■□□□ 1.84
SUDS3P1-201ENST00000505831 OLFML2BQ68BL8 750 aa26.57■■□□□ 1.84
SUDS3P1-201ENST00000505831 DPP9Q86TI2 863 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms