RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 SPDYE16A6NNV3 312 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 COL6A1P12109 1028 aa13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 SYN1P17600 705 aa13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 GRB14Q14449 540 aa13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 MIER1Q8N108 512 aa13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 ARRDC4Q8NCT1 418 aa13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 DCP1AQ9NPI6 582 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 BTBD7Q9P203 1132 aa13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 DDX20Q9UHI6 824 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-219ENST00000505207 CDK5RAP2Q96SN8 1893 aa13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 GUCY1A2P33402 732 aa13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 LRIT3Q3SXY7 679 aa13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 SLC17A8Q8NDX2 589 aa13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 SHCBP1Q8NEM2 672 aa13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 LBHD1Q9BQE6 289 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 BCL11AQ9H165 835 aa13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 MROH8Q9H579 483 aa13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 PAG1Q9NWQ8 432 aa13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 PRKAG2Q9UGJ0 569 aa13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 MYO5AQ9Y4I1 1855 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-219ENST00000505207 PFASO15067 1338 aa13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 RANBP2P49792 3224 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 TCRBV5S4A2TA0A5A2 114 aa13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 ATP5JP18859 108 aa13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 ABRAQ8N0Z2 381 aa13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 SDR42E1Q8WUS8 393 aa13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 LRCH3Q96II8 777 aa13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 MOV10L1Q9BXT6 1211 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 SPATC1LQ9H0A9 340 aa13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 ZBTB40Q9NUA8 1239 aa13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 PLXNB2O15031 1838 aa13.39□□□□□ -0.27
UBE2D3-219ENST00000505207 A0A1W2PRG0 241 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 DNM1LO00429 736 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 SOX1O00570 391 aaPredicted RBP13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 FLOT1O75955 427 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 ADORA2AP29274 412 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 ADD2P35612 726 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 ICA1Q05084 483 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 PLS1Q14651 629 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 LRRC26Q2I0M4 334 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 LCORLQ8N3X6 602 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 ARMT1Q9H993 441 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 FLRT1Q9NZU1 646 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 COG6Q9Y2V7 657 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 TMX2Q9Y320 296 aa13.38□□□□□ -0.27
UBE2D3-219ENST00000505207 KBTBD13C9JR72 458 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 WDR46O15213 610 aaKnown RBP13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 MBD4O95243 580 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 SLC25A27O95847 323 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 FCER1AP12319 257 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 ERCC3P19447 782 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 CYP2C19P33261 490 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 UBE3CQ15386 1083 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 NCAPG2Q86XI2 1143 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 DEFB123Q8N688 67 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 NPLOC4Q8TAT6 608 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 HAUS7Q99871 368 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 KANSL2Q9H9L4 492 aa13.37□□□□□ -0.27
UBE2D3-219ENST00000505207 DDX60LQ5H9U9 1706 aaKnown RBP13.36□□□□□ -0.27
UBE2D3-219ENST00000505207 CYP2D6P10635 497 aa13.36□□□□□ -0.27
UBE2D3-219ENST00000505207 COPB2P35606 906 aa13.36□□□□□ -0.27
UBE2D3-219ENST00000505207 CDK8P49336 464 aa13.36□□□□□ -0.27
UBE2D3-219ENST00000505207 C12orf60Q5U649 245 aa13.36□□□□□ -0.27
UBE2D3-219ENST00000505207 DYNLL2Q96FJ2 89 aa13.36□□□□□ -0.27
UBE2D3-219ENST00000505207 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
UBE2D3-219ENST00000505207 USP17L12C9JPN9 530 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 USP17L21D6R901 530 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 SEPT4O43236 478 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 CYBAP13498 195 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 AKR1B1P15121 316 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 SIRT2Q8IXJ6 389 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 SPICE1Q8N0Z3 855 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 SLC44A5Q8NCS7 719 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 GPATCH3Q96I76 525 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 LRRCC1Q9C099 1032 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 NRBP1Q9UHY1 535 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 SLC4A4Q9Y6R1 1079 aa13.35□□□□□ -0.27
UBE2D3-219ENST00000505207 PRKAB2O43741 272 aa13.34□□□□□ -0.27
UBE2D3-219ENST00000505207 ATN1P54259 1190 aaPredicted RBP13.34□□□□□ -0.27
UBE2D3-219ENST00000505207 KCTD2Q14681 263 aa13.34□□□□□ -0.27
UBE2D3-219ENST00000505207 C16orf86Q6ZW13 317 aa13.34□□□□□ -0.27
UBE2D3-219ENST00000505207 ATG4CQ96DT6 458 aa13.34□□□□□ -0.27
UBE2D3-219ENST00000505207 ZNF287Q9HBT7 754 aa13.34□□□□□ -0.27
UBE2D3-219ENST00000505207 ALPK3Q96L96 1907 aa13.34□□□□□ -0.27
UBE2D3-219ENST00000505207 RAD21O60216 631 aa13.33□□□□□ -0.28
UBE2D3-219ENST00000505207 COBLO75128 1261 aa13.33□□□□□ -0.28
UBE2D3-219ENST00000505207 IGHA2P01877 340 aa13.33□□□□□ -0.28
UBE2D3-219ENST00000505207 EEF2P13639 858 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-219ENST00000505207 RTP1P59025 263 aa13.33□□□□□ -0.28
UBE2D3-219ENST00000505207 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms