RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 OTOP1Q7RTM1 612 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 KBTBD3Q8NAB2 608 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 SLC44A5Q8NCS7 719 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 OSBP2Q969R2 916 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 DCP1AQ9NPI6 582 aaPredicted RBP9.67□□□□□ -0.86
RFC1-207ENST00000504554 CPA4Q9UI42 421 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 HPS5Q9UPZ3 1129 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 DDX60LQ5H9U9 1706 aaKnown RBP9.67□□□□□ -0.86
RFC1-207ENST00000504554 AK9Q5TCS8 1911 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 CENPFP49454 3210 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 FOCADQ5VW36 1801 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 PHIPQ8WWQ0 1821 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 TTC41PQ6P2S7 1318 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 USP17L5A8MUK1 530 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 M0R2C6 588 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 HLA-DOAP06340 250 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 GUCY1A2P33402 732 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 PTGDRQ13258 359 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 TATDN1Q6P1N9 297 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 CERS3Q8IU89 383 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 CRACR2BQ8N4Y2 399 aaPredicted RBP9.66□□□□□ -0.86
RFC1-207ENST00000504554 ZNF280CQ8ND82 737 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 DYNLL2Q96FJ2 89 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 CRNKL1Q9BZJ0 848 aaKnown RBP9.66□□□□□ -0.86
RFC1-207ENST00000504554 EHD4Q9H223 541 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 ZCCHC17Q9NP64 241 aaKnown RBP9.66□□□□□ -0.86
RFC1-207ENST00000504554 MCM9Q9NXL9 1143 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 ZBTB21Q9ULJ3 1066 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 TRIM17Q9Y577 477 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 DOCK1Q14185 1865 aa9.66□□□□□ -0.86
RFC1-207ENST00000504554 RNF113AO15541 343 aaKnown RBP9.65□□□□□ -0.86
RFC1-207ENST00000504554 GH2P01242 217 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 BCRP11274 1271 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 MX1P20591 662 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 HMGCS2P54868 508 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 B4GALNT3Q6L9W6 998 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 SMC5Q8IY18 1101 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 GCC1Q96CN9 775 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 STRBPQ96SI9 672 aaKnown RBP9.65□□□□□ -0.86
RFC1-207ENST00000504554 SEC62Q99442 399 aaKnown RBP9.65□□□□□ -0.86
RFC1-207ENST00000504554 WDR18Q9BV38 432 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 LNPKQ9C0E8 428 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.65□□□□□ -0.86
RFC1-207ENST00000504554 KDM4CQ9H3R0 1056 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.65□□□□□ -0.86
RFC1-207ENST00000504554 STAP2Q9UGK3 403 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 SERPINB13Q9UIV8 391 aa9.65□□□□□ -0.86
RFC1-207ENST00000504554 ZSWIM8A7E2V4 1837 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 GSG1L2A8MUP6 293 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 PEX10O60683 326 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 GLRX3O76003 335 aaKnown RBP9.64□□□□□ -0.87
RFC1-207ENST00000504554 POLR3DP05423 398 aaPredicted RBP9.64□□□□□ -0.87
RFC1-207ENST00000504554 PDE1AP54750 535 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 BACE1P56817 501 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 LACTBP83111 547 aaPredicted RBP9.64□□□□□ -0.87
RFC1-207ENST00000504554 MTMR2Q13614 643 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 AMHR2Q16671 573 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 SH3D19Q5HYK7 790 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 FASTKD5Q7L8L6 764 aaKnown RBP9.64□□□□□ -0.87
RFC1-207ENST00000504554 TTC6Q86TZ1 520 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 ACER1Q8TDN7 264 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 ERO1AQ96HE7 468 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 GPATCH3Q96I76 525 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 LRCH3Q96II8 777 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 TRIM34Q9BYJ4 488 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 EFCC1Q9HA90 598 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 EPB41L4AQ9HCS5 686 aaPredicted RBP9.64□□□□□ -0.87
RFC1-207ENST00000504554 AGTPBP1Q9UPW5 1226 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 PTPN22Q9Y2R2 807 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 SLC4A4Q9Y6R1 1079 aa9.64□□□□□ -0.87
RFC1-207ENST00000504554 USP17L12C9JPN9 530 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 USP17L21D6R901 530 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 FOXP2O15409 715 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 ASNSP08243 561 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 FECHP22830 423 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 SOX10P56693 466 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 PKN2Q16513 984 aaKnown RBP9.63□□□□□ -0.87
RFC1-207ENST00000504554 CERKLQ49MI3 558 aaPredicted RBP9.63□□□□□ -0.87
RFC1-207ENST00000504554 C12orf60Q5U649 245 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 ZSCAN25Q6NSZ9 544 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 CTR9Q6PD62 1173 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 FBXO46Q6PJ61 603 aaPredicted RBP9.63□□□□□ -0.87
RFC1-207ENST00000504554 PACS2Q86VP3 889 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 SIAH1Q8IUQ4 282 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 PROCA1Q8NCQ7 364 aaPredicted RBP9.63□□□□□ -0.87
RFC1-207ENST00000504554 APPBP2Q92624 585 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 TRIM47Q96LD4 638 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 IRX2Q9BZI1 471 aaPredicted RBP9.63□□□□□ -0.87
RFC1-207ENST00000504554 RWDD1Q9H446 243 aaPredicted RBP9.63□□□□□ -0.87
RFC1-207ENST00000504554 NPDC1Q9NQX5 325 aaPredicted RBP9.63□□□□□ -0.87
RFC1-207ENST00000504554 ATP8A2Q9NTI2 1148 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 TSR3Q9UJK0 312 aaKnown RBP9.63□□□□□ -0.87
RFC1-207ENST00000504554 SLC45A1Q9Y2W3 748 aa9.63□□□□□ -0.87
RFC1-207ENST00000504554 A0A1W2PRG0 241 aa9.62□□□□□ -0.87
RFC1-207ENST00000504554 ERC2O15083 957 aa9.62□□□□□ -0.87
RFC1-207ENST00000504554 GPAA1O43292 621 aa9.62□□□□□ -0.87
RFC1-207ENST00000504554 AKR1B1P15121 316 aa9.62□□□□□ -0.87
RFC1-207ENST00000504554 NUCB1Q02818 461 aa9.62□□□□□ -0.87
RFC1-207ENST00000504554 AAMPQ13685 434 aa9.62□□□□□ -0.87
RFC1-207ENST00000504554 SEPT2Q15019 361 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms