RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ZSCAN31Q96LW9 406 aaPredicted RBP23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 WDR18Q9BV38 432 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 ZBTB43O43298 467 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 RXRAP19793 462 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 STK3Q13188 491 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 MICU3Q86XE3 530 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 NUP133Q8WUM0 1156 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 CNKSR2Q8WXI2 1034 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 AS3MTQ9HBK9 375 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 MTMR7Q9Y216 660 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 GOLGA8BA8MQT2 603 aa23.85■■□□□ 1.41
CDC42SE2-206ENST00000503291 K7ELQ4 463 aaPredicted RBP23.85■■□□□ 1.41
CDC42SE2-206ENST00000503291 SPP2Q13103 211 aa23.85■■□□□ 1.41
CDC42SE2-206ENST00000503291 ZNF280CQ8ND82 737 aa23.85■■□□□ 1.41
CDC42SE2-206ENST00000503291 SLC10A4Q96EP9 437 aa23.85■■□□□ 1.41
CDC42SE2-206ENST00000503291 HPS5Q9UPZ3 1129 aa23.85■■□□□ 1.41
CDC42SE2-206ENST00000503291 ERO1BQ86YB8 467 aa23.84■■□□□ 1.41
CDC42SE2-206ENST00000503291 CHMP4CQ96CF2 233 aa23.84■■□□□ 1.41
CDC42SE2-206ENST00000503291 SH2D4AQ9H788 454 aa23.84■■□□□ 1.41
CDC42SE2-206ENST00000503291 SYNPO2Q9UMS6 1093 aa23.84■■□□□ 1.41
CDC42SE2-206ENST00000503291 F5H6K3 240 aa23.84■■□□□ 1.41
CDC42SE2-206ENST00000503291 KLRC3Q07444 240 aa23.84■■□□□ 1.41
CDC42SE2-206ENST00000503291 CCDC144CPQ8IYA2 1237 aa23.84■■□□□ 1.41
CDC42SE2-206ENST00000503291 FEZ1Q99689 392 aa23.84■■□□□ 1.41
CDC42SE2-206ENST00000503291 SLKQ9H2G2 1235 aaPredicted RBP23.84■■□□□ 1.41
CDC42SE2-206ENST00000503291 AFG3L2Q9Y4W6 797 aa23.84■■□□□ 1.41
CDC42SE2-206ENST00000503291 SPDYE5A6NIY4 337 aa23.83■■□□□ 1.41
CDC42SE2-206ENST00000503291 USP17L10C9JJH3 530 aa23.83■■□□□ 1.41
CDC42SE2-206ENST00000503291 RAD21O60216 631 aa23.83■■□□□ 1.41
CDC42SE2-206ENST00000503291 DDAH1O94760 285 aa23.83■■□□□ 1.41
CDC42SE2-206ENST00000503291 CCT2P78371 535 aaKnown RBP23.83■■□□□ 1.41
CDC42SE2-206ENST00000503291 NECAB1Q8N987 351 aa23.83■■□□□ 1.41
CDC42SE2-206ENST00000503291 SH2B1Q9NRF2 756 aaPredicted RBP23.83■■□□□ 1.41
CDC42SE2-206ENST00000503291 TRIM75PA6NK02 468 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 PFKFB2O60825 505 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 CALM1P0DP23 149 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 CALM2P0DP24 149 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 CALM3P0DP25 149 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 RCAN1P53805 252 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 PPATQ06203 517 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 BECN1Q14457 450 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 ZYXQ15942 572 aaKnown RBP23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 FANCBQ8NB91 859 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 GMCL1P1Q8NEA9 526 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 OTUD5Q96G74 571 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 KIAA1683Q9H0B3 1180 aa23.83■■□□□ 1.4
CDC42SE2-206ENST00000503291 METAP2P50579 478 aaKnown RBP eCLIP23.82■■□□□ 1.4
CDC42SE2-206ENST00000503291 HUNKP57058 714 aa23.82■■□□□ 1.4
CDC42SE2-206ENST00000503291 PHIPQ8WWQ0 1821 aa23.82■■□□□ 1.4
CDC42SE2-206ENST00000503291 PDHBP11177 359 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 BACE1P56817 501 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 SCRN1Q12765 414 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 MTMR2Q13614 643 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 SLFN13Q68D06 897 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 RASGRP2Q7LDG7 609 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 SAPCD2Q86UD0 394 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 OPTNQ96CV9 577 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 NCOA5Q9HCD5 579 aaKnown RBP23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 GOPCQ9HD26 462 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 GOLGA8AA7E2F4 631 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 KIAA1755Q5JYT7 1200 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 MAP3K14Q99558 947 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 VCPKMTQ9H867 229 aa23.81■■□□□ 1.4
CDC42SE2-206ENST00000503291 IRF6O14896 467 aa23.8■■□□□ 1.4
CDC42SE2-206ENST00000503291 NDUFB10O96000 172 aa23.8■■□□□ 1.4
CDC42SE2-206ENST00000503291 SNHG28P0DPA3 235 aa23.8■■□□□ 1.4
CDC42SE2-206ENST00000503291 USP17L2Q6R6M4 530 aa23.8■■□□□ 1.4
CDC42SE2-206ENST00000503291 SPICE1Q8N0Z3 855 aa23.8■■□□□ 1.4
CDC42SE2-206ENST00000503291 CTCFLQ8NI51 663 aaPredicted RBP23.8■■□□□ 1.4
CDC42SE2-206ENST00000503291 GTF3C6Q969F1 213 aa23.8■■□□□ 1.4
CDC42SE2-206ENST00000503291 FAM217BQ9NTX9 383 aaPredicted RBP23.8■■□□□ 1.4
CDC42SE2-206ENST00000503291 TMEM88BA6NKF7 163 aa23.79■■□□□ 1.4
CDC42SE2-206ENST00000503291 CDC27P30260 824 aa23.79■■□□□ 1.4
CDC42SE2-206ENST00000503291 ADD1P35611 737 aaKnown RBP23.79■■□□□ 1.4
CDC42SE2-206ENST00000503291 RTN1Q16799 776 aa23.79■■□□□ 1.4
CDC42SE2-206ENST00000503291 C19orf81C9J6K1 198 aa23.79■■□□□ 1.4
CDC42SE2-206ENST00000503291 ST3GAL1Q11201 340 aa23.79■■□□□ 1.4
CDC42SE2-206ENST00000503291 PPIL2Q13356 520 aa23.79■■□□□ 1.4
CDC42SE2-206ENST00000503291 GRM4Q14833 912 aa23.79■■□□□ 1.4
CDC42SE2-206ENST00000503291 PPP2R5BQ15173 497 aa23.79■■□□□ 1.4
CDC42SE2-206ENST00000503291 CCDC83Q8IWF9 413 aa23.79■■□□□ 1.4
CDC42SE2-206ENST00000503291 SLC1A4P43007 532 aa23.78■■□□□ 1.4
CDC42SE2-206ENST00000503291 USP14P54578 494 aa23.78■■□□□ 1.4
CDC42SE2-206ENST00000503291 DGKZQ13574 1117 aa23.78■■□□□ 1.4
CDC42SE2-206ENST00000503291 GMCL1Q96IK5 515 aa23.78■■□□□ 1.4
CDC42SE2-206ENST00000503291 EMILIN3Q9NT22 766 aa23.78■■□□□ 1.4
CDC42SE2-206ENST00000503291 MAD2L2Q9UI95 211 aa23.78■■□□□ 1.4
CDC42SE2-206ENST00000503291 PARP1P09874 1014 aaKnown RBP23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 GOLGA8HP0CJ92 632 aa23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 KIF5BP33176 963 aa23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 GJA5P36382 358 aa23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 STAG2Q8N3U4 1231 aa23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 TLL2Q9Y6L7 1015 aa23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 NID2Q14112 1375 aa23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 CCDC196A0A1B0GTZ2 297 aa23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 PALM3A6NDB9 673 aaPredicted RBP23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 HMGCS2P54868 508 aa23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 CUL4AQ13619 759 aa23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 DCAF4Q8WV16 495 aa23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 NUP88Q99567 741 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms