RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FAM178BQ8IXR5 827 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 SHKBP1Q8TBC3 707 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 RNF141Q8WVD5 230 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 FBXL18Q96ME1 805 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 OSBPL2Q9H1P3 480 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 ATG3Q9NT62 314 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 GTF2IRD1Q9UHL9 959 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 MAPK8IP1Q9UQF2 711 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 C9IYK1 514 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 RBAK-RBAKDNI3L0D1 243 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 GJB6O95452 261 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 NCAPHQ15003 741 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 SFRP5Q5T4F7 317 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 KIAA1211LQ6NV74 962 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 PPFIBP1Q86W92 1011 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 KLHL6Q8WZ60 621 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 MKL1Q969V6 931 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 COX4I2Q96KJ9 171 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 ZNF512BQ96KM6 892 aaPredicted RBP7.33□□□□□ -1.24
VPS36-206ENST00000497149 METTL22Q9BUU2 404 aaPredicted RBP7.33□□□□□ -1.24
VPS36-206ENST00000497149 ASPNQ9BXN1 380 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 OSBPL1AQ9BXW6 950 aa7.33□□□□□ -1.24
VPS36-206ENST00000497149 TP53P04637 393 aaPredicted RBP7.32□□□□□ -1.24
VPS36-206ENST00000497149 RNF4P78317 190 aa7.32□□□□□ -1.24
VPS36-206ENST00000497149 TDRD10Q5VZ19 366 aaKnown RBP7.32□□□□□ -1.24
VPS36-206ENST00000497149 SMARCC1Q92922 1105 aaPredicted RBP7.32□□□□□ -1.24
VPS36-206ENST00000497149 ZSWIM4Q9H7M6 989 aa7.32□□□□□ -1.24
VPS36-206ENST00000497149 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
VPS36-206ENST00000497149 B2RBV5 119 aa7.31□□□□□ -1.24
VPS36-206ENST00000497149 LRRN2O75325 713 aa7.31□□□□□ -1.24
VPS36-206ENST00000497149 CBX7O95931 251 aa7.31□□□□□ -1.24
VPS36-206ENST00000497149 CPSF6Q16630 551 aaKnown RBP eCLIP7.31□□□□□ -1.24
VPS36-206ENST00000497149 ANKRD39Q53RE8 183 aa7.31□□□□□ -1.24
VPS36-206ENST00000497149 ZMYM1Q5SVZ6 1142 aa7.31□□□□□ -1.24
VPS36-206ENST00000497149 AXDND1Q5T1B0 1012 aaPredicted RBP7.31□□□□□ -1.24
VPS36-206ENST00000497149 C22orf34Q6ZV56 151 aa7.31□□□□□ -1.24
VPS36-206ENST00000497149 CCDC144CPQ8IYA2 1237 aa7.31□□□□□ -1.24
VPS36-206ENST00000497149 MKRN2Q9H000 416 aaKnown RBP7.31□□□□□ -1.24
VPS36-206ENST00000497149 CCDC113Q9H0I3 377 aa7.31□□□□□ -1.24
VPS36-206ENST00000497149 FAM86C1Q9NVL1 165 aa7.31□□□□□ -1.24
VPS36-206ENST00000497149 PRR33A8MZF0 331 aa7.3□□□□□ -1.24
VPS36-206ENST00000497149 KIR3DL1P43629 444 aa7.3□□□□□ -1.24
VPS36-206ENST00000497149 AUHQ13825 339 aaKnown RBP7.3□□□□□ -1.24
VPS36-206ENST00000497149 NFE2L2Q16236 605 aa7.3□□□□□ -1.24
VPS36-206ENST00000497149 NBPF9Q3BBW0 867 aa7.3□□□□□ -1.24
VPS36-206ENST00000497149 LRP10Q7Z4F1 713 aa7.3□□□□□ -1.24
VPS36-206ENST00000497149 ZDHHC13Q8IUH4 622 aa7.3□□□□□ -1.24
VPS36-206ENST00000497149 Q96M66 194 aa7.3□□□□□ -1.24
VPS36-206ENST00000497149 CDK11AQ9UQ88 783 aaPredicted RBP7.3□□□□□ -1.24
VPS36-206ENST00000497149 PRR19A6NJB7 356 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 CCDC85CA6NKD9 419 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 ZNF865P0CJ78 1059 aaPredicted RBP7.29□□□□□ -1.24
VPS36-206ENST00000497149 OXCT1P55809 520 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 BMS1Q14692 1282 aaKnown RBP7.29□□□□□ -1.24
VPS36-206ENST00000497149 DCAF15Q66K64 600 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 MRM1Q6IN84 353 aaKnown RBP7.29□□□□□ -1.24
VPS36-206ENST00000497149 C7orf61Q8IZ16 206 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 SRPK1Q96SB4 655 aaKnown RBP7.29□□□□□ -1.24
VPS36-206ENST00000497149 PIF1Q9H611 641 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 MKNK2Q9HBH9 465 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 LRRC4CQ9HCJ2 640 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 KCNH3Q9ULD8 1083 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 LEMD3Q9Y2U8 911 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 U3KQE9 123 aa7.29□□□□□ -1.24
VPS36-206ENST00000497149 FAM221BA6H8Z2 402 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 GNAT3A8MTJ3 354 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 PDPK1O15530 556 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 RASA3Q14644 834 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 PRSS36Q5K4E3 855 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 HEATR6Q6AI08 1181 aaKnown RBP7.28□□□□□ -1.24
VPS36-206ENST00000497149 EEPD1Q7L9B9 569 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 FAM181AQ8N9Y4 354 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 DTWD2Q8NBA8 298 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 DEPDC7Q96QD5 511 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 HAUS7Q99871 368 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 SNTG2Q9NY99 539 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 PIM2Q9P1W9 311 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 SUSD2Q9UGT4 822 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 CAPN6Q9Y6Q1 641 aa7.28□□□□□ -1.24
VPS36-206ENST00000497149 SHOXO15266 292 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 CYP26A1O43174 497 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 CBFA2T2O43439 604 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 EPHX1P07099 455 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 CD247P20963 164 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 TNK2Q07912 1038 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 RASGRF1Q13972 1273 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 ARHGAP27Q6ZUM4 889 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 MFSD4AQ8N468 514 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 PIWIL2Q8TC59 973 aaKnown RBP7.27□□□□□ -1.25
VPS36-206ENST00000497149 FBXL21Q9UKT6 434 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 ZNF451Q9Y4E5 1061 aa7.27□□□□□ -1.25
VPS36-206ENST00000497149 ANKRD34BA5PLL1 514 aa7.26□□□□□ -1.25
VPS36-206ENST00000497149 FAM155AB1AL88 458 aaPredicted RBP7.26□□□□□ -1.25
VPS36-206ENST00000497149 SUSD5O60279 629 aa7.26□□□□□ -1.25
VPS36-206ENST00000497149 ZNF143P52747 638 aaPredicted RBP7.26□□□□□ -1.25
VPS36-206ENST00000497149 TCEAL1Q15170 157 aa7.26□□□□□ -1.25
VPS36-206ENST00000497149 NKPD1Q17RQ9 610 aa7.26□□□□□ -1.25
VPS36-206ENST00000497149 NOP9Q86U38 636 aaKnown RBP7.26□□□□□ -1.25
VPS36-206ENST00000497149 ST13P5Q8NFI4 369 aaPredicted RBP7.26□□□□□ -1.25
VPS36-206ENST00000497149 MRFAP1L1Q96HT8 127 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 272.5 ms