RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 BMP15O95972 392 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 NT5DC1Q5TFE4 455 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 C12orf60Q5U649 245 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 CRAMP1Q96RY5 1269 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 KCND1Q9NSA2 647 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 GGA1Q9UJY5 639 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 PAXBP1Q9Y5B6 917 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 ZNF827Q17R98 1081 aa16.9■□□□□ 0.3
CHTOP-206ENST00000495554 TMC6Q7Z403 805 aa16.9■□□□□ 0.3
CHTOP-206ENST00000495554 TBC1D16Q8TBP0 767 aa16.9■□□□□ 0.3
CHTOP-206ENST00000495554 hCG_1642624A0A1W2PR95 340 aa16.9■□□□□ 0.3
CHTOP-206ENST00000495554 CBFA2T2O43439 604 aa16.9■□□□□ 0.3
CHTOP-206ENST00000495554 RCSD1Q6JBY9 416 aa16.9■□□□□ 0.3
CHTOP-206ENST00000495554 CSRNP2Q9H175 543 aa16.9■□□□□ 0.3
CHTOP-206ENST00000495554 DLEC1Q9Y238 1755 aa16.9■□□□□ 0.3
CHTOP-206ENST00000495554 CNTNAP5Q8WYK1 1306 aa16.9■□□□□ 0.3
CHTOP-206ENST00000495554 TSPY2A6NKD2 308 aa16.89■□□□□ 0.3
CHTOP-206ENST00000495554 FOXN1O15353 648 aa16.89■□□□□ 0.3
CHTOP-206ENST00000495554 ATP1A3P13637 1013 aa16.89■□□□□ 0.3
CHTOP-206ENST00000495554 SLC4A8Q2Y0W8 1093 aa16.89■□□□□ 0.3
CHTOP-206ENST00000495554 CCDC34Q96HJ3 373 aa16.89■□□□□ 0.3
CHTOP-206ENST00000495554 SERTAD1Q9UHV2 236 aa16.89■□□□□ 0.3
CHTOP-206ENST00000495554 BMP6P22004 513 aa16.89■□□□□ 0.29
CHTOP-206ENST00000495554 SFPQP23246 707 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHTOP-206ENST00000495554 SARSP49591 514 aaKnown RBP16.89■□□□□ 0.29
CHTOP-206ENST00000495554 SRBD1Q8N5C6 995 aaKnown RBP16.89■□□□□ 0.29
CHTOP-206ENST00000495554 TRIML1Q8N9V2 468 aa16.89■□□□□ 0.29
CHTOP-206ENST00000495554 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.29
CHTOP-206ENST00000495554 LAMB1P07942 1786 aa16.89■□□□□ 0.29
CHTOP-206ENST00000495554 SERPINC1P01008 464 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 UBASH3AP57075 661 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 MLKLQ8NB16 471 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 SMARCE1Q969G3 411 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 FERMT2Q96AC1 680 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 DYNLL2Q96FJ2 89 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 DACH1Q9UI36 760 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 MAN1B1Q9UKM7 699 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 MYH6P13533 1939 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 FAM205CA6NFA0 338 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 ACTN4O43707 911 aaKnown RBP16.88■□□□□ 0.29
CHTOP-206ENST00000495554 NRDCO43847 1150 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 GSTO1P78417 241 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 EARS2Q5JPH6 523 aaKnown RBP16.88■□□□□ 0.29
CHTOP-206ENST00000495554 COL23A1Q86Y22 540 aaPredicted RBP16.88■□□□□ 0.29
CHTOP-206ENST00000495554 TNFRSF25Q93038 417 aa16.88■□□□□ 0.29
CHTOP-206ENST00000495554 KIF5BP33176 963 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 USP5P45974 858 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 NPY5RQ15761 445 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 ARMCX5Q6P1M9 558 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 CCAR2Q8N163 923 aaKnown RBP16.87■□□□□ 0.29
CHTOP-206ENST00000495554 PDILTQ8N807 584 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 TGFBRAP1Q8WUH2 860 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 AKT1S1Q96B36 256 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 USP27XA6NNY8 438 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 PLSCR1O15162 318 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 CTIFO43310 598 aaKnown RBP16.87■□□□□ 0.29
CHTOP-206ENST00000495554 BAG3O95817 575 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 LDHCP07864 332 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 SCG2P13521 617 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 MORC3Q14149 939 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 PTPN14Q15678 1187 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 CEP135Q66GS9 1140 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 NYAP1Q6ZVC0 841 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 FANCLQ9NW38 375 aa16.87■□□□□ 0.29
CHTOP-206ENST00000495554 KCNJ6P48051 423 aa16.86■□□□□ 0.29
CHTOP-206ENST00000495554 USP49Q70CQ1 688 aa16.86■□□□□ 0.29
CHTOP-206ENST00000495554 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
CHTOP-206ENST00000495554 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
CHTOP-206ENST00000495554 SPATA20Q8TB22 786 aa16.86■□□□□ 0.29
CHTOP-206ENST00000495554 TSC1Q92574 1164 aa16.86■□□□□ 0.29
CHTOP-206ENST00000495554 GPR75-ASB3A0A0A6YYF3 556 aa16.86■□□□□ 0.29
CHTOP-206ENST00000495554 PLCD1P51178 756 aa16.86■□□□□ 0.29
CHTOP-206ENST00000495554 TFAP4Q01664 338 aa16.86■□□□□ 0.29
CHTOP-206ENST00000495554 PFKFB3Q16875 520 aaPredicted RBP16.86■□□□□ 0.29
CHTOP-206ENST00000495554 CFAP100Q494V2 611 aa16.86■□□□□ 0.29
CHTOP-206ENST00000495554 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
CHTOP-206ENST00000495554 TRAPPC10P48553 1259 aa16.85■□□□□ 0.29
CHTOP-206ENST00000495554 TTC38Q5R3I4 469 aa16.85■□□□□ 0.29
CHTOP-206ENST00000495554 AMOTL1Q8IY63 956 aa16.85■□□□□ 0.29
CHTOP-206ENST00000495554 KAT14Q9H8E8 782 aa16.85■□□□□ 0.29
CHTOP-206ENST00000495554 BAZ2BQ9UIF8 2168 aaKnown RBP16.85■□□□□ 0.29
CHTOP-206ENST00000495554 C6orf229H3BNL8 230 aa16.85■□□□□ 0.29
CHTOP-206ENST00000495554 CCDC178Q5BJE1 867 aa16.85■□□□□ 0.29
CHTOP-206ENST00000495554 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
CHTOP-206ENST00000495554 FAM163AQ96GL9 167 aaPredicted RBP16.85■□□□□ 0.29
CHTOP-206ENST00000495554 LTBP1Q14766 1721 aa16.85■□□□□ 0.29
CHTOP-206ENST00000495554 ANKRD31Q8N7Z5 1873 aa16.85■□□□□ 0.29
CHTOP-206ENST00000495554 ROBO3Q96MS0 1386 aa16.85■□□□□ 0.29
CHTOP-206ENST00000495554 SLFN14P0C7P3 912 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 BTDP43251 543 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 NLRP5P59047 1200 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 MFSD14BQ5SR56 506 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 MAPKAPK5Q8IW41 473 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 ZNF710Q8N1W2 664 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 NLGN1Q8N2Q7 840 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 CCDC112Q8NEF3 446 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 ANKS1AQ92625 1134 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 EPSTI1Q96J88 318 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 VGLL3A8MV65 326 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms