RNA–Protein interactions for RNA: ENST00000495406.1

CDK5RAP2-219, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 2

Gene CDK5RAP2, Length 635 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-219ENST00000495406 TRIM60Q495X7 471 aa12.88□□□□□ -0.35
CDK5RAP2-219ENST00000495406 PRAMEF19Q5SWL8 479 aa12.88□□□□□ -0.35
CDK5RAP2-219ENST00000495406 OLFML2BQ68BL8 750 aa12.88□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP2-219ENST00000495406 MYLIPQ8WY64 445 aa12.88□□□□□ -0.35
CDK5RAP2-219ENST00000495406 DBNLQ9UJU6 430 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SEPT4O43236 478 aa12.87□□□□□ -0.35
CDK5RAP2-219ENST00000495406 FOSL2P15408 326 aa12.87□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SHMT1P34896 483 aa12.87□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SMAD3P84022 425 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP2-219ENST00000495406 NCAPG2Q86XI2 1143 aa12.87□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SSH3Q8TE77 659 aa12.87□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SPATC1LQ9H0A9 340 aa12.87□□□□□ -0.35
CDK5RAP2-219ENST00000495406 TLR7Q9NYK1 1049 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP2-219ENST00000495406 RLFQ13129 1914 aa12.87□□□□□ -0.35
CDK5RAP2-219ENST00000495406 MAGEB6P1A0A0J9YX57 407 aa12.86□□□□□ -0.35
CDK5RAP2-219ENST00000495406 COBLO75128 1261 aa12.86□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SH3RF1Q7Z6J0 888 aa12.86□□□□□ -0.35
CDK5RAP2-219ENST00000495406 TMEM57Q8N5G2 664 aa12.86□□□□□ -0.35
CDK5RAP2-219ENST00000495406 EAF2Q96CJ1 260 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP2-219ENST00000495406 MROH8Q9H579 483 aa12.86□□□□□ -0.35
CDK5RAP2-219ENST00000495406 ANTXR1Q9H6X2 564 aa12.86□□□□□ -0.35
CDK5RAP2-219ENST00000495406 C1orf115Q9H7X2 142 aa12.86□□□□□ -0.35
CDK5RAP2-219ENST00000495406 MCM9Q9NXL9 1143 aa12.86□□□□□ -0.35
CDK5RAP2-219ENST00000495406 LTBP2Q14767 1821 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 A0A1W2PRG0 241 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 FLOT1O75955 427 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 FCER1AP12319 257 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 GUCY1A2P33402 732 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 TLE2Q04725 743 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 LRRC41Q15345 812 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 MB21D1Q8N884 522 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SHCBP1Q8NEM2 672 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SYMPKQ92797 1274 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 TRIM43Q96BQ3 446 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 CRNKL1Q9BZJ0 848 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 TTYH1Q9H313 450 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 PDLIM7Q9NR12 457 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 TACC3Q9Y6A5 838 aa12.85□□□□□ -0.35
CDK5RAP2-219ENST00000495406 IGHA2P01877 340 aa12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 RARBP10826 455 aa12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 RAG1P15918 1043 aa12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 DSG3P32926 999 aa12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SNX17Q15036 470 aa12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 FAM47AQ5JRC9 791 aa12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 TMED8Q6PL24 325 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 MAML3Q96JK9 1138 aa12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 RNPC3Q96LT9 517 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 XPNPEP3Q9NQH7 507 aa12.84□□□□□ -0.35
CDK5RAP2-219ENST00000495406 SMCHD1A6NHR9 2005 aa12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 CLTBP09497 229 aa12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 C1orf53Q5VUE5 145 aa12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 TMEM179Q6ZVK1 233 aa12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 RNF180Q86T96 592 aa12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 AACSQ86V21 672 aa12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 ABRAQ8N0Z2 381 aa12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 RIOK1Q9BRS2 568 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 ARHGEF10LQ9HCE6 1279 aa12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 PRDM6Q9NQX0 595 aa12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 NOP58Q9Y2X3 529 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 ZNFX1Q9P2E3 1918 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP2-219ENST00000495406 EYSQ5T1H1 3165 aa12.82□□□□□ -0.36
CDK5RAP2-219ENST00000495406 PQBP1O60828 265 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP2-219ENST00000495406 PGK1P00558 417 aa12.82□□□□□ -0.36
CDK5RAP2-219ENST00000495406 GABPAQ06546 454 aa12.82□□□□□ -0.36
CDK5RAP2-219ENST00000495406 ATG4CQ96DT6 458 aa12.82□□□□□ -0.36
CDK5RAP2-219ENST00000495406 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
CDK5RAP2-219ENST00000495406 SH2D4AQ9H788 454 aa12.82□□□□□ -0.36
CDK5RAP2-219ENST00000495406 TMEM39AQ9NV64 488 aa12.82□□□□□ -0.36
CDK5RAP2-219ENST00000495406 PHF24Q9UPV7 400 aa12.82□□□□□ -0.36
CDK5RAP2-219ENST00000495406 VCANP13611 3396 aa12.82□□□□□ -0.36
CDK5RAP2-219ENST00000495406 RAD21O60216 631 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 SLC25A27O95847 323 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 PGK2P07205 417 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 ITGB8P26012 769 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 EVX2Q03828 476 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 FPGSQ05932 587 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 KCTD2Q14681 263 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 KIAA1755Q5JYT7 1200 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 ERC1Q8IUD2 1116 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 ITPRIPQ8IWB1 547 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 SDR42E1Q8WUS8 393 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 MMP19Q99542 508 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 SWAP70Q9UH65 585 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 ZNF236Q9UL36 1845 aa12.81□□□□□ -0.36
CDK5RAP2-219ENST00000495406 PRUNE2Q8WUY3 3088 aa12.8□□□□□ -0.36
CDK5RAP2-219ENST00000495406 TMEM265A0A087WTH1 108 aa12.8□□□□□ -0.36
CDK5RAP2-219ENST00000495406 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP2-219ENST00000495406 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP2-219ENST00000495406 DCDC2CA8MYV0 355 aa12.8□□□□□ -0.36
CDK5RAP2-219ENST00000495406 CYP2D6P10635 497 aa12.8□□□□□ -0.36
CDK5RAP2-219ENST00000495406 PDE6AP16499 860 aa12.8□□□□□ -0.36
CDK5RAP2-219ENST00000495406 EPHB4P54760 987 aa12.8□□□□□ -0.36
CDK5RAP2-219ENST00000495406 ICA1Q05084 483 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms