RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 TTLL1O95922 423 aa20.19■□□□□ 0.82
LIME1-208ENST00000493265 SREBF2Q12772 1141 aa20.19■□□□□ 0.82
LIME1-208ENST00000493265 WTAPQ15007 396 aa20.19■□□□□ 0.82
LIME1-208ENST00000493265 Q6ZUG5 572 aa20.19■□□□□ 0.82
LIME1-208ENST00000493265 ERO1BQ86YB8 467 aa20.19■□□□□ 0.82
LIME1-208ENST00000493265 LRRC47Q8N1G4 583 aaKnown RBP20.19■□□□□ 0.82
LIME1-208ENST00000493265 ENAHQ8N8S7 591 aaPredicted RBP20.19■□□□□ 0.82
LIME1-208ENST00000493265 FEZ1Q99689 392 aa20.19■□□□□ 0.82
LIME1-208ENST00000493265 AS3MTQ9HBK9 375 aa20.19■□□□□ 0.82
LIME1-208ENST00000493265 ARHGEF10LQ9HCE6 1279 aa20.19■□□□□ 0.82
LIME1-208ENST00000493265 TCP11L1Q9NUJ3 509 aa20.19■□□□□ 0.82
LIME1-208ENST00000493265 GREB1LQ9C091 1923 aaPredicted RBP20.19■□□□□ 0.82
LIME1-208ENST00000493265 NT5C2P49902 561 aa20.18■□□□□ 0.82
LIME1-208ENST00000493265 SPP2Q13103 211 aa20.18■□□□□ 0.82
LIME1-208ENST00000493265 PKN2Q16513 984 aaKnown RBP20.18■□□□□ 0.82
LIME1-208ENST00000493265 CCDC178Q5BJE1 867 aa20.18■□□□□ 0.82
LIME1-208ENST00000493265 IFIT1BQ5T764 474 aaKnown RBP20.18■□□□□ 0.82
LIME1-208ENST00000493265 NFXL1Q6ZNB6 911 aa20.18■□□□□ 0.82
LIME1-208ENST00000493265 NOL8Q76FK4 1167 aaKnown RBP20.18■□□□□ 0.82
LIME1-208ENST00000493265 TMEM87BQ96K49 555 aa20.18■□□□□ 0.82
LIME1-208ENST00000493265 SENP2Q9HC62 589 aa20.18■□□□□ 0.82
LIME1-208ENST00000493265 NAP1L2Q9ULW6 460 aaPredicted RBP20.18■□□□□ 0.82
LIME1-208ENST00000493265 SPDYE5A6NIY4 337 aa20.17■□□□□ 0.82
LIME1-208ENST00000493265 SH2B2O14492 632 aaPredicted RBP20.17■□□□□ 0.82
LIME1-208ENST00000493265 RCSD1Q6JBY9 416 aa20.17■□□□□ 0.82
LIME1-208ENST00000493265 SIAH1Q8IUQ4 282 aa20.17■□□□□ 0.82
LIME1-208ENST00000493265 IGDCC4Q8TDY8 1250 aa20.17■□□□□ 0.82
LIME1-208ENST00000493265 IL17RAQ96F46 866 aa20.17■□□□□ 0.82
LIME1-208ENST00000493265 LARP6Q9BRS8 491 aaKnown RBP20.17■□□□□ 0.82
LIME1-208ENST00000493265 KAT14Q9H8E8 782 aa20.17■□□□□ 0.82
LIME1-208ENST00000493265 NYAP2Q9P242 653 aa20.17■□□□□ 0.82
LIME1-208ENST00000493265 A0A1W2PRG0 241 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 UNCXA6NJT0 531 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 GJA5P36382 358 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 PPATQ06203 517 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 MTMR2Q13614 643 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 RABEP1Q15276 862 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 SEC23AQ15436 765 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 PPP4R3BQ5MIZ7 849 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 ZNF280CQ8ND82 737 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 BRF1Q92994 677 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 WNK4Q96J92 1243 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 TMEM47Q9BQJ4 181 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 R3HDMLQ9H3Y0 253 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 LY9Q9HBG7 655 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 WDR19Q8NEZ3 1342 aa20.16■□□□□ 0.82
LIME1-208ENST00000493265 CCDC69A6NI79 296 aa20.15■□□□□ 0.82
LIME1-208ENST00000493265 IRF6O14896 467 aa20.15■□□□□ 0.82
LIME1-208ENST00000493265 TOP1P11387 765 aaKnown RBP20.15■□□□□ 0.82
LIME1-208ENST00000493265 SPRYD7Q5W111 196 aa20.15■□□□□ 0.82
LIME1-208ENST00000493265 DGKHQ86XP1 1220 aa20.15■□□□□ 0.82
LIME1-208ENST00000493265 RAB11FIP4Q86YS3 637 aa20.15■□□□□ 0.82
LIME1-208ENST00000493265 WDR18Q9BV38 432 aa20.15■□□□□ 0.82
LIME1-208ENST00000493265 ISY1Q9ULR0 285 aaKnown RBP20.15■□□□□ 0.82
LIME1-208ENST00000493265 AFG3L2Q9Y4W6 797 aa20.15■□□□□ 0.82
LIME1-208ENST00000493265 MYH4Q9Y623 1939 aa20.14■□□□□ 0.81
LIME1-208ENST00000493265 PHIPQ8WWQ0 1821 aa20.14■□□□□ 0.81
LIME1-208ENST00000493265 USP17L10C9JJH3 530 aa20.14■□□□□ 0.81
LIME1-208ENST00000493265 FKTNO75072 461 aa20.14■□□□□ 0.81
LIME1-208ENST00000493265 APOBRQ0VD83 1088 aa20.14■□□□□ 0.81
LIME1-208ENST00000493265 PPIL2Q13356 520 aa20.14■□□□□ 0.81
LIME1-208ENST00000493265 TTC14Q96N46 770 aa20.14■□□□□ 0.81
LIME1-208ENST00000493265 SH2D4AQ9H788 454 aa20.14■□□□□ 0.81
LIME1-208ENST00000493265 AK2P54819 239 aa20.13■□□□□ 0.81
LIME1-208ENST00000493265 HMGCS2P54868 508 aa20.13■□□□□ 0.81
LIME1-208ENST00000493265 TOB2Q14106 344 aaPredicted RBP20.13■□□□□ 0.81
LIME1-208ENST00000493265 NOM1Q5C9Z4 860 aaKnown RBP20.13■□□□□ 0.81
LIME1-208ENST00000493265 FBXO46Q6PJ61 603 aaPredicted RBP20.13■□□□□ 0.81
LIME1-208ENST00000493265 SPICE1Q8N0Z3 855 aa20.13■□□□□ 0.81
LIME1-208ENST00000493265 PNMA1Q8ND90 353 aa20.13■□□□□ 0.81
LIME1-208ENST00000493265 MYL10Q9BUA6 226 aa20.13■□□□□ 0.81
LIME1-208ENST00000493265 TMX2Q9Y320 296 aa20.13■□□□□ 0.81
LIME1-208ENST00000493265 KLF18A0A0U1RQI7 1052 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 BACE1P56817 501 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 GADL1Q6ZQY3 521 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 RASGRP2Q7LDG7 609 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 NUP133Q8WUM0 1156 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 ANKS1AQ92625 1134 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 MKL1Q969V6 931 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 MTA3Q9BTC8 594 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 TBC1D2Q9BYX2 928 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 GOPCQ9HD26 462 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 BRPF3Q9ULD4 1205 aa20.12■□□□□ 0.81
LIME1-208ENST00000493265 ST18O60284 1047 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 LIFRP42702 1097 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 NOVP48745 357 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 KIAA1755Q5JYT7 1200 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 PRPF38BQ5VTL8 546 aaKnown RBP20.11■□□□□ 0.81
LIME1-208ENST00000493265 SLFN13Q68D06 897 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 SYNE3Q6ZMZ3 975 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 CATIPQ7Z7H3 387 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 CCDC144CPQ8IYA2 1237 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 ZNF654Q8IZM8 581 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 TMTC2Q8N394 836 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 CFHR5Q9BXR6 569 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 KIAA1683Q9H0B3 1180 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 TMOD4Q9NZQ9 345 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 SLC12A7Q9Y666 1083 aa20.11■□□□□ 0.81
LIME1-208ENST00000493265 F5H6K3 240 aa20.1■□□□□ 0.81
LIME1-208ENST00000493265 CXCL11O14625 94 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms