RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SLC44A5Q8NCS7 719 aa16.64■□□□□ 0.25
SAMM50-204ENST00000493161 LBHD1Q9BQE6 289 aaPredicted RBP16.64■□□□□ 0.25
SAMM50-204ENST00000493161 IL1RAPL2Q9NP60 686 aa16.64■□□□□ 0.25
SAMM50-204ENST00000493161 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
SAMM50-204ENST00000493161 ATP11BQ9Y2G3 1177 aa16.64■□□□□ 0.25
SAMM50-204ENST00000493161 RLFQ13129 1914 aa16.64■□□□□ 0.25
SAMM50-204ENST00000493161 LTBP2Q14767 1821 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 NAV1Q8NEY1 1877 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 MSCO60682 206 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 PDE6AP16499 860 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 ERCC3P19447 782 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 COG2Q14746 738 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 SLFNL1Q499Z3 407 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 SLC9C2Q5TAH2 1124 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 FAM109BQ6ICB4 259 aaPredicted RBP16.63■□□□□ 0.25
SAMM50-204ENST00000493161 SIAH1Q8IUQ4 282 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 SDR42E1Q8WUS8 393 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 DYNLL2Q96FJ2 89 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 COL25A1Q9BXS0 654 aaPredicted RBP16.63■□□□□ 0.25
SAMM50-204ENST00000493161 TANGO6Q9C0B7 1094 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 SPATC1LQ9H0A9 340 aa16.63■□□□□ 0.25
SAMM50-204ENST00000493161 A0A0G2JMZ2 1700 aa16.62■□□□□ 0.25
SAMM50-204ENST00000493161 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
SAMM50-204ENST00000493161 SHHQ15465 462 aa16.62■□□□□ 0.25
SAMM50-204ENST00000493161 C9orf50Q5SZB4 431 aa16.62■□□□□ 0.25
SAMM50-204ENST00000493161 OLFML2BQ68BL8 750 aa16.62■□□□□ 0.25
SAMM50-204ENST00000493161 SLC39A5Q6ZMH5 540 aa16.62■□□□□ 0.25
SAMM50-204ENST00000493161 LCORLQ8N3X6 602 aa16.62■□□□□ 0.25
SAMM50-204ENST00000493161 DCP1AQ9NPI6 582 aaPredicted RBP16.62■□□□□ 0.25
SAMM50-204ENST00000493161 HOXC10Q9NYD6 342 aa16.62■□□□□ 0.25
SAMM50-204ENST00000493161 ZNF532Q9HCE3 1301 aa16.62■□□□□ 0.25
SAMM50-204ENST00000493161 ZNF236Q9UL36 1845 aa16.61■□□□□ 0.25
SAMM50-204ENST00000493161 EYSQ5T1H1 3165 aa16.61■□□□□ 0.25
SAMM50-204ENST00000493161 TCRBV5S4A2TA0A5A2 114 aa16.61■□□□□ 0.25
SAMM50-204ENST00000493161 TRIM60Q495X7 471 aa16.61■□□□□ 0.25
SAMM50-204ENST00000493161 SPICE1Q8N0Z3 855 aa16.61■□□□□ 0.25
SAMM50-204ENST00000493161 ATG4CQ96DT6 458 aa16.61■□□□□ 0.25
SAMM50-204ENST00000493161 CRNKL1Q9BZJ0 848 aaKnown RBP16.61■□□□□ 0.25
SAMM50-204ENST00000493161 CUL9Q8IWT3 2517 aa16.61■□□□□ 0.25
SAMM50-204ENST00000493161 GOLIM4O00461 696 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 SEPT4O43236 478 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 PRKAB2O43741 272 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 STRNO43815 780 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 DSG3P32926 999 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 ADCYAP1R1P41586 468 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 PLS1Q14651 629 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 TMED8Q6PL24 325 aaPredicted RBP16.6■□□□□ 0.25
SAMM50-204ENST00000493161 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
SAMM50-204ENST00000493161 SH3RF1Q7Z6J0 888 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.6■□□□□ 0.25
SAMM50-204ENST00000493161 ARRDC4Q8NCT1 418 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 SHCBP1Q8NEM2 672 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 RHPN1Q8TCX5 695 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 PANK1Q8TE04 598 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 BADQ92934 168 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 FERMT2Q96AC1 680 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 DNAJC2Q99543 621 aaKnown RBP16.6■□□□□ 0.25
SAMM50-204ENST00000493161 ARMT1Q9H993 441 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 PRDM5Q9NQX1 630 aaPredicted RBP16.6■□□□□ 0.25
SAMM50-204ENST00000493161 PRKAG2Q9UGJ0 569 aa16.6■□□□□ 0.25
SAMM50-204ENST00000493161 TRIM43BA6NCK2 446 aa16.59■□□□□ 0.25
SAMM50-204ENST00000493161 APBB1O00213 710 aa16.59■□□□□ 0.25
SAMM50-204ENST00000493161 CHGBP05060 677 aa16.59■□□□□ 0.25
SAMM50-204ENST00000493161 AKR1B1P15121 316 aa16.59■□□□□ 0.25
SAMM50-204ENST00000493161 TTF1Q15361 905 aaPredicted RBP16.59■□□□□ 0.25
SAMM50-204ENST00000493161 NCAPG2Q86XI2 1143 aa16.59■□□□□ 0.25
SAMM50-204ENST00000493161 ERC1Q8IUD2 1116 aa16.59■□□□□ 0.25
SAMM50-204ENST00000493161 TRIM43Q96BQ3 446 aaPredicted RBP16.59■□□□□ 0.25
SAMM50-204ENST00000493161 BCL11AQ9H165 835 aa16.59■□□□□ 0.25
SAMM50-204ENST00000493161 CYP2D7A0A087X1C5 515 aa16.58■□□□□ 0.24
SAMM50-204ENST00000493161 KBTBD13C9JR72 458 aa16.58■□□□□ 0.24
SAMM50-204ENST00000493161 FLOT1O75955 427 aa16.58■□□□□ 0.24
SAMM50-204ENST00000493161 SNX17Q15036 470 aa16.58■□□□□ 0.24
SAMM50-204ENST00000493161 LRRC41Q15345 812 aa16.58■□□□□ 0.24
SAMM50-204ENST00000493161 FAM47AQ5JRC9 791 aa16.58■□□□□ 0.24
SAMM50-204ENST00000493161 ZNF697Q5TEC3 545 aa16.58■□□□□ 0.24
SAMM50-204ENST00000493161 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.24
SAMM50-204ENST00000493161 MAML3Q96JK9 1138 aa16.58■□□□□ 0.24
SAMM50-204ENST00000493161 PDLIM7Q9NR12 457 aa16.58■□□□□ 0.24
SAMM50-204ENST00000493161 ITGB8P26012 769 aa16.57■□□□□ 0.24
SAMM50-204ENST00000493161 TMEM132BQ14DG7 1078 aa16.57■□□□□ 0.24
SAMM50-204ENST00000493161 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
SAMM50-204ENST00000493161 MROH8Q9H579 483 aa16.57■□□□□ 0.24
SAMM50-204ENST00000493161 TMX2Q9Y320 296 aa16.57■□□□□ 0.24
SAMM50-204ENST00000493161 PGK2P07205 417 aa16.56■□□□□ 0.24
SAMM50-204ENST00000493161 TAL1P17542 331 aaPredicted RBP16.56■□□□□ 0.24
SAMM50-204ENST00000493161 ICA1Q05084 483 aa16.56■□□□□ 0.24
SAMM50-204ENST00000493161 ABRAQ8N0Z2 381 aa16.56■□□□□ 0.24
SAMM50-204ENST00000493161 MB21D1Q8N884 522 aa16.56■□□□□ 0.24
SAMM50-204ENST00000493161 SEMA6BQ9H3T3 888 aa16.56■□□□□ 0.24
SAMM50-204ENST00000493161 VCPKMTQ9H867 229 aa16.56■□□□□ 0.24
SAMM50-204ENST00000493161 FBXO28Q9NVF7 368 aa16.56■□□□□ 0.24
SAMM50-204ENST00000493161 PARP14Q460N5 1801 aa16.55■□□□□ 0.24
SAMM50-204ENST00000493161 MBD4O95243 580 aa16.55■□□□□ 0.24
SAMM50-204ENST00000493161 FCER1AP12319 257 aa16.55■□□□□ 0.24
SAMM50-204ENST00000493161 EPHB4P54760 987 aa16.55■□□□□ 0.24
SAMM50-204ENST00000493161 TLE2Q04725 743 aa16.55■□□□□ 0.24
SAMM50-204ENST00000493161 SIRT2Q8IXJ6 389 aa16.55■□□□□ 0.24
SAMM50-204ENST00000493161 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms