RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 DTNBO60941 627 aa25.69■■□□□ 1.7
PSPC1-204ENST00000492741 CDC27P30260 824 aa25.69■■□□□ 1.7
PSPC1-204ENST00000492741 KIF5BP33176 963 aa25.69■■□□□ 1.7
PSPC1-204ENST00000492741 SCYL3Q8IZE3 742 aa25.69■■□□□ 1.7
PSPC1-204ENST00000492741 MKL1Q969V6 931 aa25.69■■□□□ 1.7
PSPC1-204ENST00000492741 RBM28Q9NW13 759 aaKnown RBP25.69■■□□□ 1.7
PSPC1-204ENST00000492741 GREB1LQ9C091 1923 aaPredicted RBP25.69■■□□□ 1.7
PSPC1-204ENST00000492741 SIAH1Q8IUQ4 282 aa25.68■■□□□ 1.7
PSPC1-204ENST00000492741 LLPHQ9BRT6 129 aaKnown RBP25.68■■□□□ 1.7
PSPC1-204ENST00000492741 CWC22Q9HCG8 908 aaKnown RBP25.68■■□□□ 1.7
PSPC1-204ENST00000492741 MAP3K9P80192 1104 aa25.68■■□□□ 1.7
PSPC1-204ENST00000492741 USP17L5A8MUK1 530 aa25.67■■□□□ 1.7
PSPC1-204ENST00000492741 PPFIA3O75145 1194 aa25.67■■□□□ 1.7
PSPC1-204ENST00000492741 CDKL5O76039 1030 aa25.67■■□□□ 1.7
PSPC1-204ENST00000492741 ARMC9Q7Z3E5 817 aa25.67■■□□□ 1.7
PSPC1-204ENST00000492741 CCDC84Q86UT8 332 aaPredicted RBP25.67■■□□□ 1.7
PSPC1-204ENST00000492741 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.67■■□□□ 1.7
PSPC1-204ENST00000492741 MAP3K14Q99558 947 aa25.67■■□□□ 1.7
PSPC1-204ENST00000492741 FAM217BQ9NTX9 383 aaPredicted RBP25.67■■□□□ 1.7
PSPC1-204ENST00000492741 CSADQ9Y600 493 aa25.67■■□□□ 1.7
PSPC1-204ENST00000492741 CHADLQ6NUI6 762 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 CCDC82Q8N4S0 544 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 SH2D4AQ9H788 454 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 ISY1Q9ULR0 285 aaKnown RBP25.66■■□□□ 1.7
PSPC1-204ENST00000492741 NID2Q14112 1375 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 JAK2O60674 1132 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 PARP1P09874 1014 aaKnown RBP25.66■■□□□ 1.7
PSPC1-204ENST00000492741 GJB2P29033 226 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 ECE1P42892 770 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 GRM4Q14833 912 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 NSUN7Q8NE18 718 aaKnown RBP25.66■■□□□ 1.7
PSPC1-204ENST00000492741 ACER1Q8TDN7 264 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 DDX11Q96FC9 970 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 FEZ1Q99689 392 aa25.66■■□□□ 1.7
PSPC1-204ENST00000492741 A0A1W2PRG0 241 aa25.65■■□□□ 1.7
PSPC1-204ENST00000492741 PTPDC1A2A3K4 754 aa25.65■■□□□ 1.7
PSPC1-204ENST00000492741 CTDNEP1O95476 244 aa25.65■■□□□ 1.7
PSPC1-204ENST00000492741 FMR1Q06787 632 aaKnown RBP eCLIP25.65■■□□□ 1.7
PSPC1-204ENST00000492741 USP17L2Q6R6M4 530 aa25.65■■□□□ 1.7
PSPC1-204ENST00000492741 GOPCQ9HD26 462 aa25.65■■□□□ 1.7
PSPC1-204ENST00000492741 MYH4Q9Y623 1939 aa25.64■■□□□ 1.7
PSPC1-204ENST00000492741 F5H6K3 240 aa25.64■■□□□ 1.7
PSPC1-204ENST00000492741 PDHBP11177 359 aa25.64■■□□□ 1.7
PSPC1-204ENST00000492741 PTPRAP18433 802 aa25.64■■□□□ 1.7
PSPC1-204ENST00000492741 GNAQP50148 359 aa25.64■■□□□ 1.7
PSPC1-204ENST00000492741 HMGN5P82970 282 aaKnown RBP25.64■■□□□ 1.7
PSPC1-204ENST00000492741 KLRC3Q07444 240 aa25.64■■□□□ 1.7
PSPC1-204ENST00000492741 NOL9Q5SY16 702 aaKnown RBP25.64■■□□□ 1.7
PSPC1-204ENST00000492741 SLFN13Q68D06 897 aa25.64■■□□□ 1.7
PSPC1-204ENST00000492741 CMTR1Q8N1G2 835 aaKnown RBP25.64■■□□□ 1.7
PSPC1-204ENST00000492741 FAM184AQ8NB25 1140 aa25.64■■□□□ 1.7
PSPC1-204ENST00000492741 AS3MTQ9HBK9 375 aa25.64■■□□□ 1.7
PSPC1-204ENST00000492741 TMX2Q9Y320 296 aa25.64■■□□□ 1.7
PSPC1-204ENST00000492741 GOLGA8HP0CJ92 632 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 ZYXQ15942 572 aaKnown RBP25.63■■□□□ 1.69
PSPC1-204ENST00000492741 CCDC96Q2M329 555 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.63■■□□□ 1.69
PSPC1-204ENST00000492741 MOB2Q70IA6 237 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 MAD2L2Q9UI95 211 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 SYNPO2Q9UMS6 1093 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 ATAD5Q96QE3 1844 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 PLEKHA8P1O95397 391 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 SSRP1Q08945 709 aaKnown RBP25.63■■□□□ 1.69
PSPC1-204ENST00000492741 VGLL4Q14135 290 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 RASGRP2Q7LDG7 609 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 ANKRD13AQ8IZ07 590 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 STAG2Q8N3U4 1231 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 GMCL1P1Q8NEA9 526 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 PHKBQ93100 1093 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 ZHX2Q9Y6X8 837 aa25.63■■□□□ 1.69
PSPC1-204ENST00000492741 FRMPD2Q68DX3 1309 aaPredicted RBP25.62■■□□□ 1.69
PSPC1-204ENST00000492741 IFNAR1P17181 557 aa25.62■■□□□ 1.69
PSPC1-204ENST00000492741 SLC1A4P43007 532 aa25.62■■□□□ 1.69
PSPC1-204ENST00000492741 NTRK3Q16288 839 aa25.62■■□□□ 1.69
PSPC1-204ENST00000492741 TRIM22Q8IYM9 498 aa25.62■■□□□ 1.69
PSPC1-204ENST00000492741 SMARCC2Q8TAQ2 1214 aa25.62■■□□□ 1.69
PSPC1-204ENST00000492741 SLC26A6Q9BXS9 759 aa25.62■■□□□ 1.69
PSPC1-204ENST00000492741 KIF3AQ9Y496 699 aa25.62■■□□□ 1.69
PSPC1-204ENST00000492741 KLRF2D3W0D1 207 aa25.61■■□□□ 1.69
PSPC1-204ENST00000492741 AKAP17AQ02040 695 aaKnown RBP25.61■■□□□ 1.69
PSPC1-204ENST00000492741 ASPRV1Q53RT3 343 aa25.61■■□□□ 1.69
PSPC1-204ENST00000492741 TMTC3Q6ZXV5 915 aa25.61■■□□□ 1.69
PSPC1-204ENST00000492741 DCAF4Q8WV16 495 aa25.61■■□□□ 1.69
PSPC1-204ENST00000492741 GPCPD1Q9NPB8 672 aa25.61■■□□□ 1.69
PSPC1-204ENST00000492741 ORC3Q9UBD5 711 aaPredicted RBP25.61■■□□□ 1.69
PSPC1-204ENST00000492741 PALM3A6NDB9 673 aaPredicted RBP25.6■■□□□ 1.69
PSPC1-204ENST00000492741 CELF2O95319 508 aaKnown RBP25.6■■□□□ 1.69
PSPC1-204ENST00000492741 MAP3K11Q16584 847 aa25.6■■□□□ 1.69
PSPC1-204ENST00000492741 SPICE1Q8N0Z3 855 aa25.6■■□□□ 1.69
PSPC1-204ENST00000492741 LZTS2Q9BRK4 669 aa25.6■■□□□ 1.69
PSPC1-204ENST00000492741 DOCK1Q14185 1865 aa25.6■■□□□ 1.69
PSPC1-204ENST00000492741 USP17L10C9JJH3 530 aa25.6■■□□□ 1.69
PSPC1-204ENST00000492741 UBE2Q2LH0YL09 131 aa25.6■■□□□ 1.69
PSPC1-204ENST00000492741 NDUFB10O96000 172 aa25.6■■□□□ 1.69
PSPC1-204ENST00000492741 SNHG28P0DPA3 235 aa25.6■■□□□ 1.69
PSPC1-204ENST00000492741 SPP2Q13103 211 aa25.6■■□□□ 1.69
PSPC1-204ENST00000492741 GPATCH4Q5T3I0 446 aaKnown RBP25.6■■□□□ 1.69
PSPC1-204ENST00000492741 KCTD1Q719H9 257 aa25.6■■□□□ 1.69
PSPC1-204ENST00000492741 SRBD1Q8N5C6 995 aaKnown RBP25.6■■□□□ 1.69
PSPC1-204ENST00000492741 ZNF280CQ8ND82 737 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms