RNA–Protein interactions for RNA: ENST00000490697.1

HDLBP-244, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-244ENST00000490697 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.29■■□□□ 12e-10■■□□□ 13.3
HDLBP-244ENST00000490697 KANSL2Q9H9L4 492 aa21.29■■□□□ 1
HDLBP-244ENST00000490697 BTBD7Q9P203 1132 aa21.29■■□□□ 1
HDLBP-244ENST00000490697 ZBTB47Q9UFB7 747 aaPredicted RBP21.29■■□□□ 1
HDLBP-244ENST00000490697 GPAA1O43292 621 aa21.28■■□□□ 1
HDLBP-244ENST00000490697 FARP2O94887 1054 aaPredicted RBP21.28■■□□□ 1
HDLBP-244ENST00000490697 SLC34A2O95436 690 aa21.28■■□□□ 1
HDLBP-244ENST00000490697 MX1P20591 662 aa21.28■■□□□ 1
HDLBP-244ENST00000490697 ANKRD45Q5TZF3 282 aa21.28■■□□□ 1
HDLBP-244ENST00000490697 TRIB2Q92519 343 aa21.28■■□□□ 1
HDLBP-244ENST00000490697 VCPKMTQ9H867 229 aa21.28■■□□□ 1
HDLBP-244ENST00000490697 CWC22Q9HCG8 908 aaKnown RBP21.28■■□□□ 1
HDLBP-244ENST00000490697 HMX1Q9NP08 348 aaPredicted RBP21.28■■□□□ 1
HDLBP-244ENST00000490697 PATL2C9JE40 543 aaKnown RBP21.27■■□□□ 1
HDLBP-244ENST00000490697 TRIM32Q13049 653 aa21.27■■□□□ 1
HDLBP-244ENST00000490697 KIAA1755Q5JYT7 1200 aa21.27■■□□□ 1
HDLBP-244ENST00000490697 MAP3K21Q5TCX8 1036 aa21.27■■□□□ 1
HDLBP-244ENST00000490697 HTATIP2Q9BUP3 242 aa21.27■■□□□ 1
HDLBP-244ENST00000490697 TANGO6Q9C0B7 1094 aa21.27■■□□□ 1
HDLBP-244ENST00000490697 SLC15A5A6NIM6 579 aa21.26■□□□□ 0.99
HDLBP-244ENST00000490697 M0R2C6 588 aa21.26■□□□□ 0.99
HDLBP-244ENST00000490697 EEF2P13639 858 aaKnown RBP21.26■□□□□ 0.99
HDLBP-244ENST00000490697 ZKSCAN1P17029 563 aaPredicted RBP21.26■□□□□ 0.99
HDLBP-244ENST00000490697 PTPREP23469 700 aa21.26■□□□□ 0.99
HDLBP-244ENST00000490697 CLEC10AQ8IUN9 316 aa21.26■□□□□ 0.99
HDLBP-244ENST00000490697 MB21D1Q8N884 522 aa21.26■□□□□ 0.99
HDLBP-244ENST00000490697 SALL3Q9BXA9 1300 aa21.26■□□□□ 0.99
HDLBP-244ENST00000490697 MINDY4BA8MYZ0 360 aa21.25■□□□□ 0.99
HDLBP-244ENST00000490697 WDR46O15213 610 aaKnown RBP21.25■□□□□ 0.99
HDLBP-244ENST00000490697 DSG3P32926 999 aa21.25■□□□□ 0.99
HDLBP-244ENST00000490697 MAP2K5Q13163 448 aa21.25■□□□□ 0.99
HDLBP-244ENST00000490697 DPF3Q92784 378 aa21.25■□□□□ 0.99
HDLBP-244ENST00000490697 APBA2Q99767 749 aa21.25■□□□□ 0.99
HDLBP-244ENST00000490697 FSD1Q9BTV5 496 aa21.25■□□□□ 0.99
HDLBP-244ENST00000490697 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.25■□□□□ 0.99
HDLBP-244ENST00000490697 MKNK2Q9HBH9 465 aa21.25■□□□□ 0.99
HDLBP-244ENST00000490697 APPP05067 770 aa21.24■□□□□ 0.99
HDLBP-244ENST00000490697 ZMYM1Q5SVZ6 1142 aa21.24■□□□□ 0.99
HDLBP-244ENST00000490697 WDR78Q5VTH9 848 aa21.24■□□□□ 0.99
HDLBP-244ENST00000490697 SPICE1Q8N0Z3 855 aa21.24■□□□□ 0.99
HDLBP-244ENST00000490697 ANKLE1Q8NAG6 615 aa21.24■□□□□ 0.99
HDLBP-244ENST00000490697 ZNF287Q9HBT7 754 aa21.24■□□□□ 0.99
HDLBP-244ENST00000490697 EPB41L4AQ9HCS5 686 aaPredicted RBP21.24■□□□□ 0.99
HDLBP-244ENST00000490697 STAP2Q9UGK3 403 aa21.24■□□□□ 0.99
HDLBP-244ENST00000490697 IVNS1ABPQ9Y6Y0 642 aa21.24■□□□□ 0.99
HDLBP-244ENST00000490697 DOCK3Q8IZD9 2030 aa21.24■□□□□ 0.99
HDLBP-244ENST00000490697 FLOT1O75955 427 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 HOXC6P09630 235 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 PRKAR2AP13861 404 aaKnown RBP21.23■□□□□ 0.99
HDLBP-244ENST00000490697 RASA1P20936 1047 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 TDO2P48775 406 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 ATP2B2Q01814 1243 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 GRB14Q14449 540 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 IFNL3Q8IZI9 196 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 SHCBP1Q8NEM2 672 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 SEC62Q99442 399 aaKnown RBP21.23■□□□□ 0.99
HDLBP-244ENST00000490697 MOV10L1Q9BXT6 1211 aaKnown RBP21.23■□□□□ 0.99
HDLBP-244ENST00000490697 NACAP1Q9BZK3 213 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 SPATC1LQ9H0A9 340 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 ROBO3Q96MS0 1386 aa21.23■□□□□ 0.99
HDLBP-244ENST00000490697 H0YGN5 161 aa21.22■□□□□ 0.99
HDLBP-244ENST00000490697 STRNO43815 780 aa21.22■□□□□ 0.99
HDLBP-244ENST00000490697 CACNB2Q08289 660 aaPredicted RBP21.22■□□□□ 0.99
HDLBP-244ENST00000490697 CCL14Q16627 93 aa21.22■□□□□ 0.99
HDLBP-244ENST00000490697 GOPCQ9HD26 462 aa21.22■□□□□ 0.99
HDLBP-244ENST00000490697 PDE1AP54750 535 aa21.21■□□□□ 0.99
HDLBP-244ENST00000490697 NECAB2Q7Z6G3 386 aa21.21■□□□□ 0.99
HDLBP-244ENST00000490697 ZNF444Q8N0Y2 327 aaPredicted RBP21.21■□□□□ 0.99
HDLBP-244ENST00000490697 EVI5LQ96CN4 794 aa21.21■□□□□ 0.99
HDLBP-244ENST00000490697 NYAP2Q9P242 653 aa21.21■□□□□ 0.99
HDLBP-244ENST00000490697 OGDHLQ9ULD0 1010 aa21.21■□□□□ 0.99
HDLBP-244ENST00000490697 ADAMTS5Q9UNA0 930 aa21.21■□□□□ 0.99
HDLBP-244ENST00000490697 HABP4Q5JVS0 413 aaKnown RBP21.2■□□□□ 0.98
HDLBP-244ENST00000490697 TICAM2Q86XR7 235 aa21.2■□□□□ 0.98
HDLBP-244ENST00000490697 STK11IPQ8N1F8 1099 aa21.2■□□□□ 0.98
HDLBP-244ENST00000490697 ATG4CQ96DT6 458 aa21.2■□□□□ 0.98
HDLBP-244ENST00000490697 PAWRQ96IZ0 340 aaKnown RBP21.2■□□□□ 0.98
HDLBP-244ENST00000490697 RWDD1Q9H446 243 aaPredicted RBP21.2■□□□□ 0.98
HDLBP-244ENST00000490697 MROH8Q9H579 483 aa21.2■□□□□ 0.98
HDLBP-244ENST00000490697 NR2E3Q9Y5X4 410 aa21.2■□□□□ 0.98
HDLBP-244ENST00000490697 ERCC3P19447 782 aa21.19■□□□□ 0.98
HDLBP-244ENST00000490697 MFSD14CQ5VZR4 134 aa21.19■□□□□ 0.98
HDLBP-244ENST00000490697 MYH7P12883 1935 aa21.19■□□□□ 0.98
HDLBP-244ENST00000490697 PLXNB2O15031 1838 aa21.18■□□□□ 0.98
HDLBP-244ENST00000490697 BAZ2AQ9UIF9 1905 aaKnown RBP21.18■□□□□ 0.98
HDLBP-244ENST00000490697 IGKV6D-41A0A0C4DH26 115 aa21.18■□□□□ 0.98
HDLBP-244ENST00000490697 SLC3A2P08195 630 aaKnown RBP21.18■□□□□ 0.98
HDLBP-244ENST00000490697 PDE4BQ07343 736 aa21.18■□□□□ 0.98
HDLBP-244ENST00000490697 ABRAQ8N0Z2 381 aa21.18■□□□□ 0.98
HDLBP-244ENST00000490697 NAPBQ9H115 298 aa21.18■□□□□ 0.98
HDLBP-244ENST00000490697 F5H6K3 240 aa21.17■□□□□ 0.98
HDLBP-244ENST00000490697 SLC25A27O95847 323 aa21.17■□□□□ 0.98
HDLBP-244ENST00000490697 IGHA2P01877 340 aa21.17■□□□□ 0.98
HDLBP-244ENST00000490697 MNX1P50219 401 aaPredicted RBP21.17■□□□□ 0.98
HDLBP-244ENST00000490697 KLRC3Q07444 240 aa21.17■□□□□ 0.98
HDLBP-244ENST00000490697 PLS1Q14651 629 aa21.17■□□□□ 0.98
HDLBP-244ENST00000490697 TMEM132BQ14DG7 1078 aa21.17■□□□□ 0.98
HDLBP-244ENST00000490697 DPP9Q86TI2 863 aa21.17■□□□□ 0.98
HDLBP-244ENST00000490697 SMC5Q8IY18 1101 aa21.17■□□□□ 0.98
HDLBP-244ENST00000490697 NPLOC4Q8TAT6 608 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms