RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 PANK1Q8TE04 598 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 USP6NLQ92738 828 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
PRKCB-208ENST00000487674 APBA2Q99767 749 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 RIOK1Q9BRS2 568 aaKnown RBP10.37□□□□□ -0.75
PRKCB-208ENST00000487674 PAGR1Q9BTK6 254 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 KIAA1683Q9H0B3 1180 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 PORCNQ9H237 461 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
PRKCB-208ENST00000487674 A0A0G2JMZ2 1700 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 ZNF236Q9UL36 1845 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 USP17L15C9J2P7 530 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 USP17L13C9JLJ4 530 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 USP17L11C9JVI0 530 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 USP17L18D6R9N7 530 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 USP17L22D6RA61 530 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 USP17L17D6RBQ6 530 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 USP17L19D6RCP7 530 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 USP17L20D6RJB6 530 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 MS4A1P11836 297 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 VCAM1P19320 739 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 RGS2P41220 211 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 USP17L24Q0WX57 530 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 RAB3GAP1Q15042 981 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 ZYXQ15942 572 aaKnown RBP10.36□□□□□ -0.75
PRKCB-208ENST00000487674 ABCB5Q2M3G0 1257 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 CERKLQ49MI3 558 aaPredicted RBP10.36□□□□□ -0.75
PRKCB-208ENST00000487674 MORN1Q5T089 497 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 POTEEQ6S8J3 1075 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 PLEKHH3Q7Z736 793 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.36□□□□□ -0.75
PRKCB-208ENST00000487674 CRNKL1Q9BZJ0 848 aaKnown RBP10.36□□□□□ -0.75
PRKCB-208ENST00000487674 NBPF3Q9H094 633 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 C11orf49Q9H6J7 331 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 IL1RAPL2Q9NP60 686 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 OGDHLQ9ULD0 1010 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 RABGAP1Q9Y3P9 1069 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 MYH8P13535 1937 aa10.36□□□□□ -0.75
PRKCB-208ENST00000487674 MAGEB6P1A0A0J9YX57 407 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 HMMRO75330 724 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 GLRX3O76003 335 aaKnown RBP10.35□□□□□ -0.75
PRKCB-208ENST00000487674 PDE6AP16499 860 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 SHMT1P34896 483 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 CCNA1P78396 465 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 Q3C1V9 767 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 SLC9C2Q5TAH2 1124 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 LBX2Q6XYB7 198 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 C7orf61Q8IZ16 206 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 CLASRPQ8N2M8 674 aaKnown RBP10.35□□□□□ -0.75
PRKCB-208ENST00000487674 FBXO22Q8NEZ5 403 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 KIF1BPQ96EK5 621 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 CWC22Q9HCG8 908 aaKnown RBP10.35□□□□□ -0.75
PRKCB-208ENST00000487674 CABP5Q9NP86 173 aa10.35□□□□□ -0.75
PRKCB-208ENST00000487674 GOLIM4O00461 696 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 CNMDO75829 334 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 POLR3DP05423 398 aaPredicted RBP10.34□□□□□ -0.75
PRKCB-208ENST00000487674 IFIT2P09913 472 aaKnown RBP10.34□□□□□ -0.75
PRKCB-208ENST00000487674 PLCD1P51178 756 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 GABPAQ06546 454 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 CACNB2Q08289 660 aaPredicted RBP10.34□□□□□ -0.75
PRKCB-208ENST00000487674 MAP2K5Q13163 448 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 CCL14Q16627 93 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 CATSPERGQ6ZRH7 1159 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 RPAP2Q8IXW5 612 aaPredicted RBP10.34□□□□□ -0.75
PRKCB-208ENST00000487674 ACER1Q8TDN7 264 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 KHSRPQ92945 711 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRKCB-208ENST00000487674 MCM9Q9NXL9 1143 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 DDX19BQ9UMR2 479 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 MYH7P12883 1935 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 SZT2Q5T011 3432 aa10.34□□□□□ -0.75
PRKCB-208ENST00000487674 PFASO15067 1338 aa10.33□□□□□ -0.76
PRKCB-208ENST00000487674 ZNF532Q9HCE3 1301 aa10.33□□□□□ -0.76
PRKCB-208ENST00000487674 TCRBV5S4A2TA0A5A2 114 aa10.33□□□□□ -0.76
PRKCB-208ENST00000487674 SLC15A5A6NIM6 579 aa10.33□□□□□ -0.76
PRKCB-208ENST00000487674 SPDYE16A6NNV3 312 aaPredicted RBP10.33□□□□□ -0.76
PRKCB-208ENST00000487674 CCND3P30281 292 aaPredicted RBP10.33□□□□□ -0.76
PRKCB-208ENST00000487674 GUCY1A2P33402 732 aa10.33□□□□□ -0.76
PRKCB-208ENST00000487674 DIEXFQ68CQ4 756 aaKnown RBP10.33□□□□□ -0.76
PRKCB-208ENST00000487674 LCORLQ8N3X6 602 aa10.33□□□□□ -0.76
PRKCB-208ENST00000487674 DNAJC2Q99543 621 aaKnown RBP10.33□□□□□ -0.76
PRKCB-208ENST00000487674 RPAP3Q9H6T3 665 aaPredicted RBP10.33□□□□□ -0.76
PRKCB-208ENST00000487674 STAP2Q9UGK3 403 aa10.33□□□□□ -0.76
PRKCB-208ENST00000487674 RLFQ13129 1914 aa10.33□□□□□ -0.76
PRKCB-208ENST00000487674 APBB1O00213 710 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 MPHOSPH10O00566 681 aaKnown RBP10.32□□□□□ -0.76
PRKCB-208ENST00000487674 RAB11FIP3O75154 756 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 HOXC6P09630 235 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 COL6A1P12109 1028 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 PTPREP23469 700 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 BMP8BP34820 402 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 GRB14Q14449 540 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 SEPT2Q15019 361 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 WDR78Q5VTH9 848 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 MFSD14CQ5VZR4 134 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 TMEM179Q6ZVK1 233 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 SDR42E1Q8WUS8 393 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 EDC3Q96F86 508 aaKnown RBP10.32□□□□□ -0.76
PRKCB-208ENST00000487674 GDF15Q99988 308 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 DCP1AQ9NPI6 582 aaPredicted RBP10.32□□□□□ -0.76
PRKCB-208ENST00000487674 ZBTB40Q9NUA8 1239 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 368.2 ms