RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 NBPF3Q9H094 633 aa14.93□□□□□ -0.02
SREBF1-215ENST00000487401 ARPP21Q9UBL0 812 aaPredicted RBP14.93□□□□□ -0.02
SREBF1-215ENST00000487401 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
SREBF1-215ENST00000487401 TMX2Q9Y320 296 aa14.93□□□□□ -0.02
SREBF1-215ENST00000487401 PCDHB15Q9Y5E8 787 aa14.93□□□□□ -0.02
SREBF1-215ENST00000487401 PHIPQ8WWQ0 1821 aa14.93□□□□□ -0.02
SREBF1-215ENST00000487401 SMIM22K7EJ46 135 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 ERC2O15083 957 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 FLOT1O75955 427 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 CCL14Q16627 93 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 GIMAP6Q6P9H5 292 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
SREBF1-215ENST00000487401 SIAH1Q8IUQ4 282 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 SPICE1Q8N0Z3 855 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 MB21D1Q8N884 522 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 VCPKMTQ9H867 229 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 KANSL2Q9H9L4 492 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 MKNK2Q9HBH9 465 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 PCDH10Q9P2E7 1040 aa14.92□□□□□ -0.02
SREBF1-215ENST00000487401 LOC285556D6RIA3 1793 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 RBBP6Q7Z6E9 1792 aaKnown RBP14.91□□□□□ -0.02
SREBF1-215ENST00000487401 MINDY4BA8MYZ0 360 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 RAD21O60216 631 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 APPP05067 770 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 EEF2P13639 858 aaKnown RBP14.91□□□□□ -0.02
SREBF1-215ENST00000487401 GNAT2P19087 354 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 DSG3P32926 999 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
SREBF1-215ENST00000487401 PLS1Q14651 629 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 SBK1Q52WX2 424 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 KIAA1755Q5JYT7 1200 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 DPP9Q86TI2 863 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 CLEC10AQ8IUN9 316 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 DIS3LQ8TF46 1054 aaKnown RBP14.91□□□□□ -0.02
SREBF1-215ENST00000487401 OSBP2Q969R2 916 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 MOV10L1Q9BXT6 1211 aaKnown RBP14.91□□□□□ -0.02
SREBF1-215ENST00000487401 SPATC1LQ9H0A9 340 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 OGDHLQ9ULD0 1010 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 SIPA1L1O43166 1804 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 TTC41PQ6P2S7 1318 aa14.91□□□□□ -0.02
SREBF1-215ENST00000487401 GSG1L2A8MUP6 293 aa14.9□□□□□ -0.02
SREBF1-215ENST00000487401 WDR46O15213 610 aaKnown RBP14.9□□□□□ -0.02
SREBF1-215ENST00000487401 STRNO43815 780 aa14.9□□□□□ -0.02
SREBF1-215ENST00000487401 GRB14Q14449 540 aa14.9□□□□□ -0.02
SREBF1-215ENST00000487401 STK11IPQ8N1F8 1099 aa14.9□□□□□ -0.02
SREBF1-215ENST00000487401 C11orf49Q9H6J7 331 aa14.9□□□□□ -0.02
SREBF1-215ENST00000487401 GOPCQ9HD26 462 aa14.9□□□□□ -0.02
SREBF1-215ENST00000487401 GPAA1O43292 621 aa14.89□□□□□ -0.03
SREBF1-215ENST00000487401 HOXC6P09630 235 aa14.89□□□□□ -0.03
SREBF1-215ENST00000487401 ERCC3P19447 782 aa14.89□□□□□ -0.03
SREBF1-215ENST00000487401 CCND3P30281 292 aaPredicted RBP14.89□□□□□ -0.03
SREBF1-215ENST00000487401 TDO2P48775 406 aa14.89□□□□□ -0.03
SREBF1-215ENST00000487401 NCAPG2Q86XI2 1143 aa14.89□□□□□ -0.03
SREBF1-215ENST00000487401 SHCBP1Q8NEM2 672 aa14.89□□□□□ -0.03
SREBF1-215ENST00000487401 ATG4CQ96DT6 458 aa14.89□□□□□ -0.03
SREBF1-215ENST00000487401 MROH8Q9H579 483 aa14.89□□□□□ -0.03
SREBF1-215ENST00000487401 ZNF287Q9HBT7 754 aa14.89□□□□□ -0.03
SREBF1-215ENST00000487401 SLC5A4Q9NY91 659 aa14.89□□□□□ -0.03
SREBF1-215ENST00000487401 PATL2C9JE40 543 aaKnown RBP14.88□□□□□ -0.03
SREBF1-215ENST00000487401 CNGA1P29973 690 aa14.88□□□□□ -0.03
SREBF1-215ENST00000487401 FXR1P51114 621 aaKnown RBP eCLIP14.88□□□□□ -0.03
SREBF1-215ENST00000487401 FSD1Q9BTV5 496 aa14.88□□□□□ -0.03
SREBF1-215ENST00000487401 NACAP1Q9BZK3 213 aa14.88□□□□□ -0.03
SREBF1-215ENST00000487401 FLRT1Q9NZU1 646 aa14.88□□□□□ -0.03
SREBF1-215ENST00000487401 RBM27Q9P2N5 1060 aaKnown RBP14.88□□□□□ -0.03
SREBF1-215ENST00000487401 M0R2C6 588 aa14.87□□□□□ -0.03
SREBF1-215ENST00000487401 MX1P20591 662 aa14.87□□□□□ -0.03
SREBF1-215ENST00000487401 ADORA2AP29274 412 aa14.87□□□□□ -0.03
SREBF1-215ENST00000487401 MNX1P50219 401 aaPredicted RBP14.87□□□□□ -0.03
SREBF1-215ENST00000487401 ANKRD45Q5TZF3 282 aa14.87□□□□□ -0.03
SREBF1-215ENST00000487401 LHX8Q68G74 356 aa14.87□□□□□ -0.03
SREBF1-215ENST00000487401 C7orf61Q8IZ16 206 aa14.87□□□□□ -0.03
SREBF1-215ENST00000487401 ZNF444Q8N0Y2 327 aaPredicted RBP14.87□□□□□ -0.03
SREBF1-215ENST00000487401 NPLOC4Q8TAT6 608 aa14.87□□□□□ -0.03
SREBF1-215ENST00000487401 OTUD7AQ8TE49 926 aaPredicted RBP14.87□□□□□ -0.03
SREBF1-215ENST00000487401 CRBNQ96SW2 442 aa14.87□□□□□ -0.03
SREBF1-215ENST00000487401 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.87□□□□□ -0.03
SREBF1-215ENST00000487401 PTPRFP10586 1907 aa14.87□□□□□ -0.03
SREBF1-215ENST00000487401 MSCO60682 206 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 SLC25A27O95847 323 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 SLC3A2P08195 630 aaKnown RBP14.86□□□□□ -0.03
SREBF1-215ENST00000487401 FCER1AP12319 257 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 RASA1P20936 1047 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 CYP2C19P33261 490 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 TMEM132BQ14DG7 1078 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 FAM83BQ5T0W9 1011 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 IFNL3Q8IZI9 196 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 ABRAQ8N0Z2 381 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 PI4K2BQ8TCG2 481 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 FBXO28Q9NVF7 368 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 NYAP2Q9P242 653 aa14.86□□□□□ -0.03
SREBF1-215ENST00000487401 OLFML2BQ68BL8 750 aa14.85□□□□□ -0.03
SREBF1-215ENST00000487401 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
SREBF1-215ENST00000487401 EPB41L4AQ9HCS5 686 aaPredicted RBP14.85□□□□□ -0.03
SREBF1-215ENST00000487401 CLIP2Q9UDT6 1046 aa14.85□□□□□ -0.03
SREBF1-215ENST00000487401 STAP2Q9UGK3 403 aa14.85□□□□□ -0.03
SREBF1-215ENST00000487401 DDX20Q9UHI6 824 aaKnown RBP14.85□□□□□ -0.03
SREBF1-215ENST00000487401 PPP1R9AQ9ULJ8 1098 aa14.85□□□□□ -0.03
SREBF1-215ENST00000487401 ZMYND8Q9ULU4 1186 aaPredicted RBP14.85□□□□□ -0.03
SREBF1-215ENST00000487401 FOCADQ5VW36 1801 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms