RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 KIAA1683Q9H0B3 1180 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 ISY1Q9ULR0 285 aaKnown RBP13.39□□□□□ -0.27
NUP50-216ENST00000486184 TMX2Q9Y320 296 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 IFIT3O14879 490 aaKnown RBP13.38□□□□□ -0.27
NUP50-216ENST00000486184 PRC1O43663 620 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 SH3D19Q5HYK7 790 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 IFIT1BQ5T764 474 aaKnown RBP13.38□□□□□ -0.27
NUP50-216ENST00000486184 BLOC1S2Q6QNY1 142 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 CYB5R4Q7L1T6 521 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 DGKHQ86XP1 1220 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 MB21D2Q8IYB1 491 aaPredicted RBP13.38□□□□□ -0.27
NUP50-216ENST00000486184 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
NUP50-216ENST00000486184 KCNB2Q92953 911 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 MS4A4AQ96JQ5 239 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 TTC14Q96N46 770 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 KAT14Q9H8E8 782 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 IL17RBQ9NRM6 502 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 SYNPO2Q9UMS6 1093 aa13.38□□□□□ -0.27
NUP50-216ENST00000486184 PARP14Q460N5 1801 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 A0A1W2PRG0 241 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 ALDH1A1P00352 501 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 TOP1P11387 765 aaKnown RBP13.37□□□□□ -0.27
NUP50-216ENST00000486184 CASTP20810 708 aaKnown RBP13.37□□□□□ -0.27
NUP50-216ENST00000486184 ANAPC15P60006 121 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 MAP2K1Q02750 393 aaPredicted RBP13.37□□□□□ -0.27
NUP50-216ENST00000486184 WTAPQ15007 396 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 ADCK5Q3MIX3 580 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 TMEM67Q5HYA8 995 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 CHST3Q7LGC8 479 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 BRI3BPQ8WY22 251 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 LPAR1Q92633 364 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 TMEM87BQ96K49 555 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 ZIC5Q96T25 663 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 MTA3Q9BTC8 594 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 PNMA3Q9UL41 463 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 AGTPBP1Q9UPW5 1226 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 MTMR7Q9Y216 660 aa13.37□□□□□ -0.27
NUP50-216ENST00000486184 TESPA1A2RU30 521 aaPredicted RBP13.36□□□□□ -0.27
NUP50-216ENST00000486184 OSBPP22059 807 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 TM4SF4P48230 202 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 NFXL1Q6ZNB6 911 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 DHX32Q7L7V1 743 aaKnown RBP13.36□□□□□ -0.27
NUP50-216ENST00000486184 ANKRD23Q86SG2 305 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 SPICE1Q8N0Z3 855 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 ENAHQ8N8S7 591 aaPredicted RBP13.36□□□□□ -0.27
NUP50-216ENST00000486184 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 MKL1Q969V6 931 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 TMEM47Q9BQJ4 181 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 BACH2Q9BYV9 841 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 C22orf23Q9BZE7 217 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 TANGO6Q9C0B7 1094 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 CYP46A1Q9Y6A2 500 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 WDR19Q8NEZ3 1342 aa13.36□□□□□ -0.27
NUP50-216ENST00000486184 CCDC69A6NI79 296 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 BTBD19C9JJ37 291 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 F5H6K3 240 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 PDHXO00330 501 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 WDR46O15213 610 aaKnown RBP13.35□□□□□ -0.27
NUP50-216ENST00000486184 VCAM1P19320 739 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 ANTXR2P58335 489 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 IRX3P78415 501 aaPredicted RBP13.35□□□□□ -0.27
NUP50-216ENST00000486184 KLRC3Q07444 240 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 DGKZQ13574 1117 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 TAF1CQ15572 869 aaPredicted RBP13.35□□□□□ -0.27
NUP50-216ENST00000486184 SLFN13Q68D06 897 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 SIAH1Q8IUQ4 282 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 NKX2-3Q8TAU0 364 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 RPAP3Q9H6T3 665 aaPredicted RBP13.35□□□□□ -0.27
NUP50-216ENST00000486184 ZCCHC17Q9NP64 241 aaKnown RBP13.35□□□□□ -0.27
NUP50-216ENST00000486184 EMILIN3Q9NT22 766 aa13.35□□□□□ -0.27
NUP50-216ENST00000486184 USP17L15C9J2P7 530 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 USP17L13C9JLJ4 530 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 USP17L11C9JVI0 530 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 USP17L18D6R9N7 530 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 USP17L22D6RA61 530 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 USP17L17D6RBQ6 530 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 USP17L19D6RCP7 530 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 USP17L20D6RJB6 530 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 IGF2BP3O00425 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
NUP50-216ENST00000486184 NDUFB10O96000 172 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 RPS6KB1P23443 525 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 SLC1A4P43007 532 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 USP17L24Q0WX57 530 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
NUP50-216ENST00000486184 CCDC96Q2M329 555 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 TREML2Q5T2D2 321 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 RCSD1Q6JBY9 416 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 RUFY3Q7L099 469 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 CATIPQ7Z7H3 387 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 SMCR8Q8TEV9 937 aaPredicted RBP13.34□□□□□ -0.27
NUP50-216ENST00000486184 PARK7Q99497 189 aaKnown RBP13.34□□□□□ -0.27
NUP50-216ENST00000486184 LRRC2Q9BYS8 371 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 TM6SF1Q9BZW5 370 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms