RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 FKBP1CQ5VVH2 108 aa16.23■□□□□ 0.19
CLK3-204ENST00000483723 CIAPIN1Q6FI81 312 aa16.23■□□□□ 0.19
CLK3-204ENST00000483723 OGFOD1Q8N543 542 aa16.23■□□□□ 0.19
CLK3-204ENST00000483723 PPP1R1BQ9UD71 204 aaPredicted RBP16.23■□□□□ 0.19
CLK3-204ENST00000483723 CLIC4Q9Y696 253 aa16.23■□□□□ 0.19
CLK3-204ENST00000483723 LETM1O95202 739 aaPredicted RBP16.22■□□□□ 0.19
CLK3-204ENST00000483723 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 LRSAM1Q6UWE0 723 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 DIS3L2Q8IYB7 885 aaKnown RBP16.22■□□□□ 0.19
CLK3-204ENST00000483723 JDP2Q8WYK2 163 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 ZNF70Q9UC06 446 aaPredicted RBP16.22■□□□□ 0.19
CLK3-204ENST00000483723 BCS1LQ9Y276 419 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 SNHG28P0DPA3 235 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 SCG2P13521 617 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 LIG1P18858 919 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 CEBPZQ03701 1054 aaKnown RBP16.22■□□□□ 0.19
CLK3-204ENST00000483723 SPDYE2Q495Y8 402 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 PPP4R3BQ5MIZ7 849 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 NOSTRINQ8IVI9 506 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 SPZ1Q9BXG8 430 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 SPON1Q9HCB6 807 aa16.22■□□□□ 0.19
CLK3-204ENST00000483723 GOLGA6L4A6NEF3 574 aa16.21■□□□□ 0.19
CLK3-204ENST00000483723 CYTH3O43739 400 aa16.21■□□□□ 0.19
CLK3-204ENST00000483723 TTLL1O95922 423 aa16.21■□□□□ 0.19
CLK3-204ENST00000483723 TNIP1Q15025 636 aa16.21■□□□□ 0.19
CLK3-204ENST00000483723 SLC39A14Q15043 492 aa16.21■□□□□ 0.19
CLK3-204ENST00000483723 NPY5RQ15761 445 aa16.21■□□□□ 0.19
CLK3-204ENST00000483723 FAM177A1Q8N128 213 aaPredicted RBP16.21■□□□□ 0.19
CLK3-204ENST00000483723 KCNG4Q8TDN1 519 aa16.21■□□□□ 0.19
CLK3-204ENST00000483723 FAM151AQ8WW52 585 aa16.21■□□□□ 0.19
CLK3-204ENST00000483723 SH3GLB2Q9NR46 395 aa16.21■□□□□ 0.19
CLK3-204ENST00000483723 VPS54Q9P1Q0 977 aa16.21■□□□□ 0.19
CLK3-204ENST00000483723 A0A1W2PQ27 194 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 A0A1W2PQ64 194 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 A0A1W2PQD8 194 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 hCG_1642624A0A1W2PR95 340 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 SYCE3A1L190 88 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 PARP1P09874 1014 aaKnown RBP16.2■□□□□ 0.18
CLK3-204ENST00000483723 SLURP2P0DP57 97 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 MRE11P49959 708 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 PTPAQ15257 358 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 ADALQ6DHV7 355 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 MKL1Q969V6 931 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 TMOD2Q9NZR1 351 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
CLK3-204ENST00000483723 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 SPTLC2O15270 562 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 VEGFAP15692 232 aaPredicted RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 RPS12P25398 132 aaKnown RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 TOB1P50616 345 aaPredicted RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 PRELPP51888 382 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 ZNF280AP59817 542 aaPredicted RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 GNL2Q13823 731 aaKnown RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 STK38Q15208 465 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 CERKLQ49MI3 558 aaPredicted RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 ZSCAN29Q8IWY8 852 aaPredicted RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 NLGN2Q8NFZ4 835 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 TNFRSF25Q93038 417 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 CNTNAP1P78357 1384 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 BAZ2BQ9UIF8 2168 aaKnown RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 FZD9O00144 591 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 PPP6R2O75170 966 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 PDHBP11177 359 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 KRT2P35908 639 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 SF3A1Q15459 793 aaKnown RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 RILPL1Q5EBL4 403 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 USP17L2Q6R6M4 530 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 FAM83AQ86UY5 434 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 DDX19AQ9NUU7 478 aaKnown RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 NYAP2Q9P242 653 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
CLK3-204ENST00000483723 MORC2Q9Y6X9 1032 aaPredicted RBP16.19■□□□□ 0.18
CLK3-204ENST00000483723 MYH4Q9Y623 1939 aa16.18■□□□□ 0.18
CLK3-204ENST00000483723 USP17L5A8MUK1 530 aa16.18■□□□□ 0.18
CLK3-204ENST00000483723 XRCC6P12956 609 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLK3-204ENST00000483723 NR5A1Q13285 461 aa16.18■□□□□ 0.18
CLK3-204ENST00000483723 ASPRV1Q53RT3 343 aa16.18■□□□□ 0.18
CLK3-204ENST00000483723 ENGASEQ8NFI3 743 aa16.18■□□□□ 0.18
CLK3-204ENST00000483723 RIOX1Q9H6W3 641 aa16.18■□□□□ 0.18
CLK3-204ENST00000483723 KANSL2Q9H9L4 492 aa16.18■□□□□ 0.18
CLK3-204ENST00000483723 PGAP2Q9UHJ9 254 aa16.18■□□□□ 0.18
CLK3-204ENST00000483723 HERC5Q9UII4 1024 aaKnown RBP16.18■□□□□ 0.18
CLK3-204ENST00000483723 ME1P48163 572 aa16.17■□□□□ 0.18
CLK3-204ENST00000483723 AXDND1Q5T1B0 1012 aaPredicted RBP16.17■□□□□ 0.18
CLK3-204ENST00000483723 SIAH1Q8IUQ4 282 aa16.17■□□□□ 0.18
CLK3-204ENST00000483723 CCAR1Q8IX12 1150 aaKnown RBP16.17■□□□□ 0.18
CLK3-204ENST00000483723 BICD2Q8TD16 824 aa16.17■□□□□ 0.18
CLK3-204ENST00000483723 DPF2Q92785 391 aa16.17■□□□□ 0.18
CLK3-204ENST00000483723 DACT1Q9NYF0 836 aa16.17■□□□□ 0.18
CLK3-204ENST00000483723 CLRN2A0PK11 232 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 FAM196BA6NMK8 535 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 TCP10L2B9ZVM9 353 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 WNT10BO00744 389 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 TBC1D12O60347 775 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 GOLGA8HP0CJ92 632 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 MAP3K10Q02779 954 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms