RNA–Protein interactions for RNA: ENST00000482396.5

SFMBT1-204, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 2

Gene SFMBT1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-204ENST00000482396 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.65■■□□□ 1.38
SFMBT1-204ENST00000482396 COL11A1P12107 1806 aaPredicted RBP23.65■■□□□ 1.38
SFMBT1-204ENST00000482396 LAMA4Q16363 1823 aa23.65■■□□□ 1.38
SFMBT1-204ENST00000482396 MYPNQ86TC9 1320 aa23.64■■□□□ 1.38
SFMBT1-204ENST00000482396 SOX10P56693 466 aa23.64■■□□□ 1.37
SFMBT1-204ENST00000482396 PRKCZQ05513 592 aa23.64■■□□□ 1.37
SFMBT1-204ENST00000482396 CTDSPL2Q05D32 466 aa23.64■■□□□ 1.37
SFMBT1-204ENST00000482396 VCPKMTQ9H867 229 aa23.64■■□□□ 1.37
SFMBT1-204ENST00000482396 ARHGEF10LQ9HCE6 1279 aa23.64■■□□□ 1.37
SFMBT1-204ENST00000482396 LBX2Q6XYB7 198 aa23.63■■□□□ 1.37
SFMBT1-204ENST00000482396 IL25Q9H293 177 aa23.63■■□□□ 1.37
SFMBT1-204ENST00000482396 BRCA2P51587 3418 aa23.62■■□□□ 1.37
SFMBT1-204ENST00000482396 SPDYE16A6NNV3 312 aaPredicted RBP23.62■■□□□ 1.37
SFMBT1-204ENST00000482396 FGRP09769 529 aa23.62■■□□□ 1.37
SFMBT1-204ENST00000482396 CWC27Q6UX04 472 aaKnown RBP23.62■■□□□ 1.37
SFMBT1-204ENST00000482396 ZNF333Q96JL9 665 aa23.62■■□□□ 1.37
SFMBT1-204ENST00000482396 NYAP2Q9P242 653 aa23.62■■□□□ 1.37
SFMBT1-204ENST00000482396 TNRC18O15417 2968 aaPredicted RBP23.62■■□□□ 1.37
SFMBT1-204ENST00000482396 PLIN4Q96Q06 1357 aa23.62■■□□□ 1.37
SFMBT1-204ENST00000482396 ZMYM6O95789 1325 aa23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 HOXD10P28358 340 aa23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 ERVK-9P63128 1117 aa23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 ERVK-24P63145 666 aa23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 ZNF444Q8N0Y2 327 aaPredicted RBP23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 SPICE1Q8N0Z3 855 aa23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 NEDD1Q8NHV4 660 aa23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 SH3TC2Q8TF17 1288 aa23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 LPAR1Q92633 364 aa23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 BTBD7Q9P203 1132 aa23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 GJD2Q9UKL4 321 aa23.61■■□□□ 1.37
SFMBT1-204ENST00000482396 TNPO2O14787 897 aaKnown RBP23.6■■□□□ 1.37
SFMBT1-204ENST00000482396 FLT3LGP49771 235 aa23.6■■□□□ 1.37
SFMBT1-204ENST00000482396 PDE4BQ07343 736 aa23.6■■□□□ 1.37
SFMBT1-204ENST00000482396 FAM47AQ5JRC9 791 aa23.6■■□□□ 1.37
SFMBT1-204ENST00000482396 GPRC5AQ8NFJ5 357 aa23.6■■□□□ 1.37
SFMBT1-204ENST00000482396 CEP95Q96GE4 821 aa23.6■■□□□ 1.37
SFMBT1-204ENST00000482396 NBPF3Q9H094 633 aa23.6■■□□□ 1.37
SFMBT1-204ENST00000482396 PORCNQ9H237 461 aa23.6■■□□□ 1.37
SFMBT1-204ENST00000482396 RABGAP1Q9Y3P9 1069 aa23.6■■□□□ 1.37
SFMBT1-204ENST00000482396 ATP2B2Q01814 1243 aa23.59■■□□□ 1.37
SFMBT1-204ENST00000482396 SLC9C1Q4G0N8 1177 aa23.59■■□□□ 1.37
SFMBT1-204ENST00000482396 NKX2-3Q8TAU0 364 aa23.59■■□□□ 1.37
SFMBT1-204ENST00000482396 GTF3C2Q8WUA4 911 aaPredicted RBP23.59■■□□□ 1.37
SFMBT1-204ENST00000482396 MKL1Q969V6 931 aa23.59■■□□□ 1.37
SFMBT1-204ENST00000482396 PAGR1Q9BTK6 254 aa23.59■■□□□ 1.37
SFMBT1-204ENST00000482396 SH2D4AQ9H788 454 aa23.59■■□□□ 1.37
SFMBT1-204ENST00000482396 ZNF287Q9HBT7 754 aa23.59■■□□□ 1.37
SFMBT1-204ENST00000482396 MTMR4Q9NYA4 1195 aa23.59■■□□□ 1.37
SFMBT1-204ENST00000482396 WDR46O15213 610 aaKnown RBP23.58■■□□□ 1.37
SFMBT1-204ENST00000482396 TFAP4Q01664 338 aa23.58■■□□□ 1.37
SFMBT1-204ENST00000482396 IRF5Q13568 498 aa23.58■■□□□ 1.37
SFMBT1-204ENST00000482396 COG2Q14746 738 aa23.58■■□□□ 1.37
SFMBT1-204ENST00000482396 SKAP1Q86WV1 359 aa23.58■■□□□ 1.37
SFMBT1-204ENST00000482396 DIAPH3Q9NSV4 1193 aa23.58■■□□□ 1.37
SFMBT1-204ENST00000482396 ZNFX1Q9P2E3 1918 aaKnown RBP23.57■■□□□ 1.36
SFMBT1-204ENST00000482396 POTEFA5A3E0 1075 aa23.57■■□□□ 1.36
SFMBT1-204ENST00000482396 HIP1O00291 1037 aa23.57■■□□□ 1.36
SFMBT1-204ENST00000482396 SLC3A2P08195 630 aaKnown RBP23.57■■□□□ 1.36
SFMBT1-204ENST00000482396 RAET1EQ8TD07 263 aa23.57■■□□□ 1.36
SFMBT1-204ENST00000482396 TANGO6Q9C0B7 1094 aa23.57■■□□□ 1.36
SFMBT1-204ENST00000482396 IL17RBQ9NRM6 502 aa23.57■■□□□ 1.36
SFMBT1-204ENST00000482396 CLIP2Q9UDT6 1046 aa23.57■■□□□ 1.36
SFMBT1-204ENST00000482396 ORC4O43929 436 aa23.56■■□□□ 1.36
SFMBT1-204ENST00000482396 GRK4P32298 578 aa23.56■■□□□ 1.36
SFMBT1-204ENST00000482396 DSG3P32926 999 aa23.56■■□□□ 1.36
SFMBT1-204ENST00000482396 COA7Q96BR5 231 aa23.56■■□□□ 1.36
SFMBT1-204ENST00000482396 FBXO28Q9NVF7 368 aa23.56■■□□□ 1.36
SFMBT1-204ENST00000482396 F5H6K3 240 aa23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 TSPY3P0CV98 308 aa23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 TSPY8P0CW00 308 aa23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 NOVP48745 357 aa23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 MFAP1P55081 439 aaKnown RBP23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 HAND2P61296 217 aa23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 KLRC3Q07444 240 aa23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 NUP88Q99567 741 aaPredicted RBP23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 GOPCQ9HD26 462 aa23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 HOXC10Q9NYD6 342 aa23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 ADAMTS5Q9UNA0 930 aa23.55■■□□□ 1.36
SFMBT1-204ENST00000482396 ADCY3O60266 1144 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 NMT2O60551 498 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 NDUFB10O96000 172 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 ELNP15502 786 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 CHMLP26374 656 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 MTFR1Q15390 333 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 FAM83BQ5T0W9 1011 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 CENPQQ7L2Z9 268 aaPredicted RBP23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 NBPF11Q86T75 865 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 TBC1D10CQ8IV04 446 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 USP6NLQ92738 828 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 ATG4CQ96DT6 458 aa23.54■■□□□ 1.36
SFMBT1-204ENST00000482396 FLOT1O75955 427 aa23.53■■□□□ 1.36
SFMBT1-204ENST00000482396 TTLL1O95922 423 aa23.53■■□□□ 1.36
SFMBT1-204ENST00000482396 GPR142Q7Z601 462 aa23.53■■□□□ 1.36
SFMBT1-204ENST00000482396 PXYLP1Q8TE99 480 aa23.53■■□□□ 1.36
SFMBT1-204ENST00000482396 DSCC1Q9BVC3 393 aa23.53■■□□□ 1.36
SFMBT1-204ENST00000482396 MAPK4P31152 587 aa23.52■■□□□ 1.36
SFMBT1-204ENST00000482396 MORN1Q5T089 497 aa23.52■■□□□ 1.36
SFMBT1-204ENST00000482396 LRRC47Q8N1G4 583 aaKnown RBP23.52■■□□□ 1.36
SFMBT1-204ENST00000482396 SLAIN1Q8ND83 568 aa23.52■■□□□ 1.36
SFMBT1-204ENST00000482396 SYNPO2Q9UMS6 1093 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 516 ms