RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 C19orf57Q0VDD7 668 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 DDX46Q7L014 1031 aaKnown RBP7.08□□□□□ -1.28
COPA-203ENST00000481040 DDX1Q92499 740 aaKnown RBP7.08□□□□□ -1.28
COPA-203ENST00000481040 ACSF2Q96CM8 615 aaPredicted RBP7.08□□□□□ -1.28
COPA-203ENST00000481040 DHRS1Q96LJ7 313 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 APBA2Q99767 749 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 NOP53Q9NZM5 478 aaKnown RBP7.08□□□□□ -1.28
COPA-203ENST00000481040 FAM229AH3BQW9 127 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 LIG1P18858 919 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 GNALP38405 381 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 PMS1P54277 932 aaKnown RBP7.07□□□□□ -1.28
COPA-203ENST00000481040 PPP2R2AP63151 447 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 BIRC2Q13490 618 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 MAP7Q14244 749 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 PDE3AQ14432 1141 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 LRRC41Q15345 812 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 KIF4BQ2VIQ3 1234 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 PSAPL1Q6NUJ1 521 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 PPFIBP1Q86W92 1011 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 C12orf40Q86WS4 652 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 PPM1KQ8N3J5 372 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 IL22RA1Q8N6P7 574 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 WNT8BQ93098 351 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 WDR89Q96FK6 387 aaPredicted RBP7.07□□□□□ -1.28
COPA-203ENST00000481040 ASPSCR1Q9BZE9 553 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 FAM86C1Q9NVL1 165 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 LRP2BPQ9P2M1 347 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 SUSD2Q9UGT4 822 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 CSADQ9Y600 493 aa7.07□□□□□ -1.28
COPA-203ENST00000481040 SHTN1A0MZ66 631 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 M0R082 166 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 CTSBP07858 339 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 SUMO1P63165 101 aaKnown RBP7.06□□□□□ -1.28
COPA-203ENST00000481040 MAP9Q49MG5 647 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 C20orf204Q6ZNR8 217 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 TMEM192Q8IY95 271 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 FAM13CQ8NE31 585 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 ZNF417Q8TAU3 575 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 LEO1Q8WVC0 666 aaPredicted RBP7.06□□□□□ -1.28
COPA-203ENST00000481040 SLC6A18Q96N87 628 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 RPS6KC1Q96S38 1066 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 ZNF587Q96SQ5 575 aaPredicted RBP7.06□□□□□ -1.28
COPA-203ENST00000481040 WNT10AQ9GZT5 417 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 OSGEPQ9NPF4 335 aa7.06□□□□□ -1.28
COPA-203ENST00000481040 SUCOQ9UBS9 1254 aaKnown RBP7.06□□□□□ -1.28
COPA-203ENST00000481040 FAM83GA6ND36 823 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 LINC01387J3KSC0 135 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 PIK3R2O00459 728 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 CAND2O75155 1236 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 RGS9O75916 674 aaPredicted RBP7.05□□□□□ -1.28
COPA-203ENST00000481040 DNAJC8O75937 253 aaPredicted RBP7.05□□□□□ -1.28
COPA-203ENST00000481040 TP53P04637 393 aaPredicted RBP7.05□□□□□ -1.28
COPA-203ENST00000481040 ITGAVP06756 1048 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 EPHX1P07099 455 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 FGFR1P11362 822 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 YARSP54577 528 aaKnown RBP7.05□□□□□ -1.28
COPA-203ENST00000481040 ETF1P62495 437 aaKnown RBP7.05□□□□□ -1.28
COPA-203ENST00000481040 STRN3Q13033 797 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 DOC2BQ14184 412 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 ZC3H12AQ5D1E8 599 aaKnown RBP7.05□□□□□ -1.28
COPA-203ENST00000481040 FAM117BQ6P1L5 589 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 TXNDC11Q6PKC3 985 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 NECAB2Q7Z6G3 386 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 SLFN12Q8IYM2 578 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 AHI1Q8N157 1196 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 LRRN4CLQ8ND94 238 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 SFMBT1Q9UHJ3 866 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 PHLDB1Q86UU1 1377 aa7.05□□□□□ -1.28
COPA-203ENST00000481040 RGS13O14921 159 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 PRODHO43272 600 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 SCGB1D2O95969 90 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 PABPC1P11940 636 aaKnown RBP7.04□□□□□ -1.28
COPA-203ENST00000481040 NID1P14543 1247 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 RAB27AP51159 221 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 NEK2P51955 445 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 RING1Q06587 406 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 UBE4AQ14139 1066 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 TRIM61Q5EBN2 209 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 TDRD10Q5VZ19 366 aaKnown RBP7.04□□□□□ -1.28
COPA-203ENST00000481040 HEATR6Q6AI08 1181 aaKnown RBP7.04□□□□□ -1.28
COPA-203ENST00000481040 NSMFQ6X4W1 530 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 ZNF227Q86WZ6 799 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 MCATQ8IVS2 390 aaKnown RBP7.04□□□□□ -1.28
COPA-203ENST00000481040 PHACTR4Q8IZ21 702 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 WDR66Q8TBY9 1149 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 PPP1R14AQ96A00 147 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 HAUS7Q99871 368 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 SLC5A4Q9NY91 659 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 TJP2Q9UDY2 1190 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 HIF3AQ9Y2N7 669 aa7.04□□□□□ -1.28
COPA-203ENST00000481040 FSCN2O14926 492 aa7.03□□□□□ -1.28
COPA-203ENST00000481040 SPATA31C1P0DKV0 1188 aa7.03□□□□□ -1.28
COPA-203ENST00000481040 MTMR1Q13613 665 aa7.03□□□□□ -1.28
COPA-203ENST00000481040 GRIK5Q16478 980 aa7.03□□□□□ -1.28
COPA-203ENST00000481040 RNF219Q5W0B1 726 aaPredicted RBP7.03□□□□□ -1.28
COPA-203ENST00000481040 LHFPL2Q6ZUX7 228 aa7.03□□□□□ -1.28
COPA-203ENST00000481040 NUDT8Q8WV74 236 aa7.03□□□□□ -1.28
COPA-203ENST00000481040 SMARCC1Q92922 1105 aaPredicted RBP7.03□□□□□ -1.28
COPA-203ENST00000481040 OSBP2Q969R2 916 aa7.03□□□□□ -1.28
COPA-203ENST00000481040 TMEM87BQ96K49 555 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms