RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 A0A1W2PRG0 241 aa18.31■□□□□ 0.52
CDK9-203ENST00000480353 HMGCRP04035 888 aa18.31■□□□□ 0.52
CDK9-203ENST00000480353 GJB1P08034 283 aa18.31■□□□□ 0.52
CDK9-203ENST00000480353 COG2Q14746 738 aa18.31■□□□□ 0.52
CDK9-203ENST00000480353 PLEKHH3Q7Z736 793 aa18.31■□□□□ 0.52
CDK9-203ENST00000480353 ZNF444Q8N0Y2 327 aaPredicted RBP18.31■□□□□ 0.52
CDK9-203ENST00000480353 SPICE1Q8N0Z3 855 aa18.31■□□□□ 0.52
CDK9-203ENST00000480353 LNPKQ9C0E8 428 aa18.31■□□□□ 0.52
CDK9-203ENST00000480353 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 FLOT1O75955 427 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 TFRCP02786 760 aaKnown RBP18.3■□□□□ 0.52
CDK9-203ENST00000480353 RGS2P41220 211 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 GJA8P48165 433 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 Q3C1V9 767 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 GPR142Q7Z601 462 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 CLEC10AQ8IUN9 316 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 TRMT44Q8IYL2 757 aaKnown RBP18.3■□□□□ 0.52
CDK9-203ENST00000480353 IFNL3Q8IZI9 196 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 EXOC6Q8TAG9 804 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 VCPKMTQ9H867 229 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 TMX2Q9Y320 296 aa18.3■□□□□ 0.52
CDK9-203ENST00000480353 SUPT16HQ9Y5B9 1047 aaKnown RBP18.3■□□□□ 0.52
CDK9-203ENST00000480353 SMIM22K7EJ46 135 aa18.29■□□□□ 0.52
CDK9-203ENST00000480353 EEF2P13639 858 aaKnown RBP18.29■□□□□ 0.52
CDK9-203ENST00000480353 ZKSCAN1P17029 563 aaPredicted RBP18.29■□□□□ 0.52
CDK9-203ENST00000480353 PDE1AP54750 535 aa18.29■□□□□ 0.52
CDK9-203ENST00000480353 PDE4BQ07343 736 aa18.29■□□□□ 0.52
CDK9-203ENST00000480353 PLS1Q14651 629 aa18.29■□□□□ 0.52
CDK9-203ENST00000480353 ZMYM1Q5SVZ6 1142 aa18.29■□□□□ 0.52
CDK9-203ENST00000480353 U2AF1L4Q8WU68 220 aaKnown RBP18.29■□□□□ 0.52
CDK9-203ENST00000480353 SEC62Q99442 399 aaKnown RBP18.29■□□□□ 0.52
CDK9-203ENST00000480353 PORCNQ9H237 461 aa18.29■□□□□ 0.52
CDK9-203ENST00000480353 SPDYE16A6NNV3 312 aaPredicted RBP18.28■□□□□ 0.52
CDK9-203ENST00000480353 WDR46O15213 610 aaKnown RBP18.28■□□□□ 0.52
CDK9-203ENST00000480353 LBX2Q6XYB7 198 aa18.28■□□□□ 0.52
CDK9-203ENST00000480353 RILPL2Q969X0 211 aa18.28■□□□□ 0.52
CDK9-203ENST00000480353 DEFB118Q96PH6 123 aa18.28■□□□□ 0.52
CDK9-203ENST00000480353 HMX1Q9NP08 348 aaPredicted RBP18.28■□□□□ 0.52
CDK9-203ENST00000480353 STAP2Q9UGK3 403 aa18.28■□□□□ 0.52
CDK9-203ENST00000480353 GJD2Q9UKL4 321 aa18.28■□□□□ 0.52
CDK9-203ENST00000480353 PLXNB2O15031 1838 aa18.28■□□□□ 0.52
CDK9-203ENST00000480353 MYH4Q9Y623 1939 aa18.27■□□□□ 0.52
CDK9-203ENST00000480353 SGPL1O95470 568 aa18.27■□□□□ 0.52
CDK9-203ENST00000480353 CAPN2P17655 700 aa18.27■□□□□ 0.52
CDK9-203ENST00000480353 MB21D1Q8N884 522 aa18.27■□□□□ 0.52
CDK9-203ENST00000480353 EPB41L4AQ9HCS5 686 aaPredicted RBP18.27■□□□□ 0.52
CDK9-203ENST00000480353 SALL3Q9BXA9 1300 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 PRDM1O75626 825 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 CNMDO75829 334 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 TSPY3P0CV98 308 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 TSPY8P0CW00 308 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 XRCC5P13010 732 aaKnown RBP18.26■□□□□ 0.51
CDK9-203ENST00000480353 RASA1P20936 1047 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 DPF3Q92784 378 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 APBA2Q99767 749 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 HTATIP2Q9BUP3 242 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDK9-203ENST00000480353 BTBD7Q9P203 1132 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 CTDP1Q9Y5B0 961 aaPredicted RBP18.26■□□□□ 0.51
CDK9-203ENST00000480353 ROBO3Q96MS0 1386 aa18.26■□□□□ 0.51
CDK9-203ENST00000480353 RPTORQ8N122 1335 aa18.25■□□□□ 0.51
CDK9-203ENST00000480353 FARP2O94887 1054 aaPredicted RBP18.25■□□□□ 0.51
CDK9-203ENST00000480353 DSG3P32926 999 aa18.25■□□□□ 0.51
CDK9-203ENST00000480353 MAP2K5Q13163 448 aa18.25■□□□□ 0.51
CDK9-203ENST00000480353 CCDC129Q6ZRS4 1044 aa18.25■□□□□ 0.51
CDK9-203ENST00000480353 CHD1LQ86WJ1 897 aa18.25■□□□□ 0.51
CDK9-203ENST00000480353 TRIB2Q92519 343 aa18.25■□□□□ 0.51
CDK9-203ENST00000480353 SHISA4Q96DD7 197 aa18.25■□□□□ 0.51
CDK9-203ENST00000480353 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
CDK9-203ENST00000480353 ISY1Q9ULR0 285 aaKnown RBP18.25■□□□□ 0.51
CDK9-203ENST00000480353 SLC15A5A6NIM6 579 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 PPARAQ07869 468 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 MORN1Q5T089 497 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 DPP9Q86TI2 863 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 NCAPG2Q86XI2 1143 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 SIAH1Q8IUQ4 282 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 SMC5Q8IY18 1101 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 SPATC1LQ9H0A9 340 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 SLC5A4Q9NY91 659 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 NYAP2Q9P242 653 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 CLIP2Q9UDT6 1046 aa18.24■□□□□ 0.51
CDK9-203ENST00000480353 PRKAR2AP13861 404 aaKnown RBP18.23■□□□□ 0.51
CDK9-203ENST00000480353 PTPREP23469 700 aa18.23■□□□□ 0.51
CDK9-203ENST00000480353 MCMDC2Q4G0Z9 681 aa18.23■□□□□ 0.51
CDK9-203ENST00000480353 KIAA1755Q5JYT7 1200 aa18.23■□□□□ 0.51
CDK9-203ENST00000480353 PPP4R3BQ5MIZ7 849 aa18.23■□□□□ 0.51
CDK9-203ENST00000480353 FAM83BQ5T0W9 1011 aa18.23■□□□□ 0.51
CDK9-203ENST00000480353 MFSD14CQ5VZR4 134 aa18.23■□□□□ 0.51
CDK9-203ENST00000480353 ATG4CQ96DT6 458 aa18.23■□□□□ 0.51
CDK9-203ENST00000480353 PAK6Q9NQU5 681 aaPredicted RBP18.23■□□□□ 0.51
CDK9-203ENST00000480353 GREB1LQ9C091 1923 aaPredicted RBP18.23■□□□□ 0.51
CDK9-203ENST00000480353 COL11A1P12107 1806 aaPredicted RBP18.22■□□□□ 0.51
CDK9-203ENST00000480353 PARP14Q460N5 1801 aa18.22■□□□□ 0.51
CDK9-203ENST00000480353 IGHDP01880 384 aa18.22■□□□□ 0.51
CDK9-203ENST00000480353 MFAP1P55081 439 aaKnown RBP18.22■□□□□ 0.51
CDK9-203ENST00000480353 NUCB1Q02818 461 aa18.22■□□□□ 0.51
CDK9-203ENST00000480353 TRIM32Q13049 653 aa18.22■□□□□ 0.51
CDK9-203ENST00000480353 POTEEQ6S8J3 1075 aa18.22■□□□□ 0.51
CDK9-203ENST00000480353 MOV10L1Q9BXT6 1211 aaKnown RBP18.22■□□□□ 0.51
CDK9-203ENST00000480353 TOMM22Q9NS69 142 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms