RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 HOXC10Q9NYD6 342 aa19.6■□□□□ 0.73
DDX56-210ENST00000479440 ERCC3P19447 782 aa19.59■□□□□ 0.73
DDX56-210ENST00000479440 SHMT1P34896 483 aa19.59■□□□□ 0.73
DDX56-210ENST00000479440 ADCYAP1R1P41586 468 aa19.59■□□□□ 0.73
DDX56-210ENST00000479440 LRRC41Q15345 812 aa19.59■□□□□ 0.73
DDX56-210ENST00000479440 ABRAQ8N0Z2 381 aa19.59■□□□□ 0.73
DDX56-210ENST00000479440 MAGEB6Q8N7X4 407 aa19.59■□□□□ 0.73
DDX56-210ENST00000479440 TRIM43BA6NCK2 446 aa19.58■□□□□ 0.72
DDX56-210ENST00000479440 TRIM27P14373 513 aa19.58■□□□□ 0.72
DDX56-210ENST00000479440 POLA2Q14181 598 aa19.58■□□□□ 0.72
DDX56-210ENST00000479440 FAM47AQ5JRC9 791 aa19.58■□□□□ 0.72
DDX56-210ENST00000479440 TRIM43Q96BQ3 446 aaPredicted RBP19.58■□□□□ 0.72
DDX56-210ENST00000479440 MROH8Q9H579 483 aa19.58■□□□□ 0.72
DDX56-210ENST00000479440 DBNLQ9UJU6 430 aaKnown RBP19.58■□□□□ 0.72
DDX56-210ENST00000479440 TACC3Q9Y6A5 838 aa19.58■□□□□ 0.72
DDX56-210ENST00000479440 NAV1Q8NEY1 1877 aa19.58■□□□□ 0.72
DDX56-210ENST00000479440 MYO5AQ9Y4I1 1855 aaKnown RBP19.58■□□□□ 0.72
DDX56-210ENST00000479440 CLTBP09497 229 aa19.57■□□□□ 0.72
DDX56-210ENST00000479440 MAP3K12Q12852 859 aa19.57■□□□□ 0.72
DDX56-210ENST00000479440 SEPT2Q15019 361 aa19.57■□□□□ 0.72
DDX56-210ENST00000479440 SH3RF1Q7Z6J0 888 aa19.57■□□□□ 0.72
DDX56-210ENST00000479440 FERMT2Q96AC1 680 aa19.57■□□□□ 0.72
DDX56-210ENST00000479440 NRBP1Q9UHY1 535 aa19.57■□□□□ 0.72
DDX56-210ENST00000479440 ROBO3Q96MS0 1386 aa19.57■□□□□ 0.72
DDX56-210ENST00000479440 VCANP13611 3396 aa19.57■□□□□ 0.72
DDX56-210ENST00000479440 SPTBN5Q9NRC6 3674 aaKnown RBP19.56■□□□□ 0.72
DDX56-210ENST00000479440 MPHOSPH10O00566 681 aaKnown RBP19.56■□□□□ 0.72
DDX56-210ENST00000479440 COBLO75128 1261 aa19.56■□□□□ 0.72
DDX56-210ENST00000479440 POLR3DP05423 398 aaPredicted RBP19.56■□□□□ 0.72
DDX56-210ENST00000479440 RARBP10826 455 aa19.56■□□□□ 0.72
DDX56-210ENST00000479440 GUCY1A2P33402 732 aa19.56■□□□□ 0.72
DDX56-210ENST00000479440 PLCD1P51178 756 aa19.56■□□□□ 0.72
DDX56-210ENST00000479440 PLS1Q14651 629 aa19.56■□□□□ 0.72
DDX56-210ENST00000479440 NCAPG2Q86XI2 1143 aa19.56■□□□□ 0.72
DDX56-210ENST00000479440 MAML3Q96JK9 1138 aa19.56■□□□□ 0.72
DDX56-210ENST00000479440 XPNPEP3Q9NQH7 507 aa19.56■□□□□ 0.72
DDX56-210ENST00000479440 PHF24Q9UPV7 400 aa19.56■□□□□ 0.72
DDX56-210ENST00000479440 EYSQ5T1H1 3165 aa19.55■□□□□ 0.72
DDX56-210ENST00000479440 SURF6O75683 361 aaKnown RBP19.55■□□□□ 0.72
DDX56-210ENST00000479440 TLE2Q04725 743 aa19.55■□□□□ 0.72
DDX56-210ENST00000479440 TJAP1Q5JTD0 557 aa19.55■□□□□ 0.72
DDX56-210ENST00000479440 RNF180Q86T96 592 aa19.55■□□□□ 0.72
DDX56-210ENST00000479440 SSH3Q8TE77 659 aa19.55■□□□□ 0.72
DDX56-210ENST00000479440 FRAT1Q92837 279 aaPredicted RBP19.55■□□□□ 0.72
DDX56-210ENST00000479440 TLR7Q9NYK1 1049 aaKnown RBP19.55■□□□□ 0.72
DDX56-210ENST00000479440 DNAH12Q6ZR08 3092 aa19.55■□□□□ 0.72
DDX56-210ENST00000479440 FCER1AP12319 257 aa19.54■□□□□ 0.72
DDX56-210ENST00000479440 RAG1P15918 1043 aa19.54■□□□□ 0.72
DDX56-210ENST00000479440 FPGSQ05932 587 aa19.54■□□□□ 0.72
DDX56-210ENST00000479440 GABPAQ06546 454 aa19.54■□□□□ 0.72
DDX56-210ENST00000479440 SH2D4AQ9H788 454 aa19.54■□□□□ 0.72
DDX56-210ENST00000479440 LAMA2P24043 3122 aaKnown RBP19.53■□□□□ 0.72
DDX56-210ENST00000479440 A0A1W2PRG0 241 aa19.53■□□□□ 0.72
DDX56-210ENST00000479440 FLOT1O75955 427 aa19.53■□□□□ 0.72
DDX56-210ENST00000479440 DSG3P32926 999 aa19.53■□□□□ 0.72
DDX56-210ENST00000479440 PRAMEF19Q5SWL8 479 aa19.53■□□□□ 0.72
DDX56-210ENST00000479440 TMEM179Q6ZVK1 233 aa19.53■□□□□ 0.72
DDX56-210ENST00000479440 CLUAP1Q96AJ1 413 aa19.53■□□□□ 0.72
DDX56-210ENST00000479440 CCDC8Q9H0W5 538 aaPredicted RBP19.53■□□□□ 0.72
DDX56-210ENST00000479440 ARHGEF10LQ9HCE6 1279 aa19.53■□□□□ 0.72
DDX56-210ENST00000479440 MAGEB6P1A0A0J9YX57 407 aa19.52■□□□□ 0.72
DDX56-210ENST00000479440 KIAA0355O15063 1070 aa19.52■□□□□ 0.72
DDX56-210ENST00000479440 PQBP1O60828 265 aaKnown RBP19.52■□□□□ 0.72
DDX56-210ENST00000479440 SLC25A27O95847 323 aa19.52■□□□□ 0.72
DDX56-210ENST00000479440 DNAJB2P25686 324 aa19.52■□□□□ 0.72
DDX56-210ENST00000479440 ATP8B2P98198 1209 aa19.52■□□□□ 0.72
DDX56-210ENST00000479440 ATG4CQ96DT6 458 aa19.52■□□□□ 0.72
DDX56-210ENST00000479440 RIOK1Q9BRS2 568 aaKnown RBP19.52■□□□□ 0.72
DDX56-210ENST00000479440 CRNKL1Q9BZJ0 848 aaKnown RBP19.52■□□□□ 0.72
DDX56-210ENST00000479440 MCM9Q9NXL9 1143 aa19.52■□□□□ 0.72
DDX56-210ENST00000479440 TNNQ9UQP3 1299 aa19.52■□□□□ 0.72
DDX56-210ENST00000479440 CDH23Q9H251 3354 aa19.51■□□□□ 0.71
DDX56-210ENST00000479440 A0A1W2PQ45 241 aaPredicted RBP19.51■□□□□ 0.71
DDX56-210ENST00000479440 A0A1W2PQY0 241 aa19.51■□□□□ 0.71
DDX56-210ENST00000479440 MMP19Q99542 508 aa19.51■□□□□ 0.71
DDX56-210ENST00000479440 ANTXR1Q9H6X2 564 aa19.51■□□□□ 0.71
DDX56-210ENST00000479440 SWAP70Q9UH65 585 aa19.51■□□□□ 0.71
DDX56-210ENST00000479440 NOP58Q9Y2X3 529 aaKnown RBP19.51■□□□□ 0.71
DDX56-210ENST00000479440 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.5■□□□□ 0.71
DDX56-210ENST00000479440 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.5■□□□□ 0.71
DDX56-210ENST00000479440 TNFRSF10AO00220 468 aa19.5■□□□□ 0.71
DDX56-210ENST00000479440 BCAR3O75815 825 aa19.5■□□□□ 0.71
DDX56-210ENST00000479440 AKR1A1P14550 325 aa19.5■□□□□ 0.71
DDX56-210ENST00000479440 ITGB8P26012 769 aa19.5■□□□□ 0.71
DDX56-210ENST00000479440 EPHB4P54760 987 aa19.5■□□□□ 0.71
DDX56-210ENST00000479440 ICA1Q05084 483 aa19.5■□□□□ 0.71
DDX56-210ENST00000479440 TTF1Q15361 905 aaPredicted RBP19.5■□□□□ 0.71
DDX56-210ENST00000479440 TMEM57Q8N5G2 664 aa19.5■□□□□ 0.71
DDX56-210ENST00000479440 EAF2Q96CJ1 260 aaPredicted RBP19.5■□□□□ 0.71
DDX56-210ENST00000479440 TMEM39AQ9NV64 488 aa19.5■□□□□ 0.71
DDX56-210ENST00000479440 WDR46O15213 610 aaKnown RBP19.49■□□□□ 0.71
DDX56-210ENST00000479440 PGK1P00558 417 aa19.49■□□□□ 0.71
DDX56-210ENST00000479440 COPB2P35606 906 aa19.49■□□□□ 0.71
DDX56-210ENST00000479440 KCTD2Q14681 263 aa19.49■□□□□ 0.71
DDX56-210ENST00000479440 GRIN2CQ14957 1233 aa19.49■□□□□ 0.71
DDX56-210ENST00000479440 TIFAQ96CG3 184 aa19.49■□□□□ 0.71
DDX56-210ENST00000479440 VCPKMTQ9H867 229 aa19.49■□□□□ 0.71
DDX56-210ENST00000479440 DIS3Q9Y2L1 958 aaKnown RBP19.49■□□□□ 0.71
DDX56-210ENST00000479440 DCDC2CA8MYV0 355 aa19.48■□□□□ 0.71
DDX56-210ENST00000479440 CCDC174Q6PII3 467 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms