RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 KIAA1683Q9H0B3 1180 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 MTMR4Q9NYA4 1195 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 LAMA4Q16363 1823 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 PDHXO00330 501 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 TNRC18O15417 2968 aaPredicted RBP17.94■□□□□ 0.46
COL16A1-211ENST00000479100 TTLL1O95922 423 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 SH3D19Q5HYK7 790 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 TREML2Q5T2D2 321 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 GPAT2Q6NUI2 795 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 PROCA1Q8NCQ7 364 aaPredicted RBP17.94■□□□□ 0.46
COL16A1-211ENST00000479100 NKX2-3Q8TAU0 364 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 EMILIN3Q9NT22 766 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 NYAP2Q9P242 653 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 STX8Q9UNK0 236 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 PTPN22Q9Y2R2 807 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 PLIN4Q96Q06 1357 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 TAF1CQ15572 869 aaPredicted RBP17.93■□□□□ 0.46
COL16A1-211ENST00000479100 STOX1Q6ZVD7 989 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 ZFYVE28Q9HCC9 887 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 ZCCHC17Q9NP64 241 aaKnown RBP17.93■□□□□ 0.46
COL16A1-211ENST00000479100 IL17RBQ9NRM6 502 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 ZSWIM5Q9P217 1185 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 AGTPBP1Q9UPW5 1226 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 ZKSCAN1P17029 563 aaPredicted RBP17.92■□□□□ 0.46
COL16A1-211ENST00000479100 PABPC4Q13310 644 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL16A1-211ENST00000479100 PPP4R3BQ5MIZ7 849 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 IQCA1Q86XH1 822 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 SPICE1Q8N0Z3 855 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
COL16A1-211ENST00000479100 NCOA7Q8NI08 942 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 EFCC1Q9HA90 598 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 GOPCQ9HD26 462 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 NT5C2P49902 561 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 CHMP4CQ96CF2 233 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 C12orf42Q96LP6 360 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 UBAC1Q9BSL1 405 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 VCPKMTQ9H867 229 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 TCP11L1Q9NUJ3 509 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 MTMR7Q9Y216 660 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 TLR2O60603 784 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 CYP2C8P10632 490 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 VCAM1P19320 739 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 OSBPP22059 807 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 MCCP23508 829 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 IRX3P78415 501 aaPredicted RBP17.9■□□□□ 0.46
COL16A1-211ENST00000479100 KIAA1755Q5JYT7 1200 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 CYB5R4Q7L1T6 521 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 ARMC5Q96C12 935 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 USP26Q9BXU7 913 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 RPAP3Q9H6T3 665 aaPredicted RBP17.9■□□□□ 0.46
COL16A1-211ENST00000479100 ISY1Q9ULR0 285 aaKnown RBP17.9■□□□□ 0.46
COL16A1-211ENST00000479100 F5H6K3 240 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 EIF5BO60841 1220 aaKnown RBP17.89■□□□□ 0.45
COL16A1-211ENST00000479100 HSPA4P34932 840 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 KLRC3Q07444 240 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 CCDC178Q5BJE1 867 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
COL16A1-211ENST00000479100 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 RASEFQ8IZ41 740 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 MKL1Q969V6 931 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 ZSCAN10Q96SZ4 725 aaPredicted RBP17.89■□□□□ 0.45
COL16A1-211ENST00000479100 PARK7Q99497 189 aaKnown RBP17.89■□□□□ 0.45
COL16A1-211ENST00000479100 TANGO6Q9C0B7 1094 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 PNMA3Q9UL41 463 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 PTPRFP10586 1907 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 GREB1LQ9C091 1923 aaPredicted RBP17.89■□□□□ 0.45
COL16A1-211ENST00000479100 PDE4DIPQ5VU43 2346 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L15C9J2P7 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L13C9JLJ4 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L11C9JVI0 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L18D6R9N7 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L22D6RA61 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L17D6RBQ6 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L19D6RCP7 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L20D6RJB6 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L24Q0WX57 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 SLFN13Q68D06 897 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 SMCR8Q8TEV9 937 aaPredicted RBP17.88■□□□□ 0.45
COL16A1-211ENST00000479100 LPAR1Q92633 364 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 TMEM47Q9BQJ4 181 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 ASCC2Q9H1I8 757 aaPredicted RBP17.88■□□□□ 0.45
COL16A1-211ENST00000479100 SLC45A1Q9Y2W3 748 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 ERICH2A1L162 156 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 IFIT3O14879 490 aaKnown RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 EPB41L2O43491 1005 aaKnown RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 SEC24BO95487 1268 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 NDUFB10O96000 172 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 TOP1P11387 765 aaKnown RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 HOXA7P31268 230 aaPredicted RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 KRT32Q14532 448 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 C8orf34Q49A92 452 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 FAM83BQ5T0W9 1011 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 C17orf99Q6UX52 265 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 MB21D2Q8IYB1 491 aaPredicted RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 ENAHQ8N8S7 591 aaPredicted RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 TTC14Q96N46 770 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 NUP88Q99567 741 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms