RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 GPATCH2Q9NW75 528 aa4.36□□□□□ -1.71
CACUL1-202ENST00000477583 KIAA1522Q9P206 1035 aaPredicted RBP4.36□□□□□ -1.71
CACUL1-202ENST00000477583 ZGLP1P0C6A0 271 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 LTKP29376 864 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 LIG3P49916 1009 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 MAP3K11Q16584 847 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 LDLRAD1Q5T700 205 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 AGMOQ6ZNB7 445 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 MCATQ8IVS2 390 aaKnown RBP4.35□□□□□ -1.71
CACUL1-202ENST00000477583 OXR1Q8N573 874 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 SYTL4Q96C24 671 aaPredicted RBP4.35□□□□□ -1.71
CACUL1-202ENST00000477583 ACSF2Q96CM8 615 aaPredicted RBP4.35□□□□□ -1.71
CACUL1-202ENST00000477583 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 BCL11AQ9H165 835 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 C19orf44Q9H6X5 657 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 SP110Q9HB58 689 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 ADAM30Q9UKF2 790 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 KCNH3Q9ULD8 1083 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 CEP131Q9UPN4 1083 aa4.35□□□□□ -1.71
CACUL1-202ENST00000477583 FITM1A5D6W6 292 aa4.34□□□□□ -1.71
CACUL1-202ENST00000477583 VAMP1P23763 118 aa4.34□□□□□ -1.71
CACUL1-202ENST00000477583 RPL6Q02878 288 aaKnown RBP4.34□□□□□ -1.71
CACUL1-202ENST00000477583 ZNF605Q86T29 641 aa4.34□□□□□ -1.71
CACUL1-202ENST00000477583 TSPYL5Q86VY4 417 aaPredicted RBP4.34□□□□□ -1.71
CACUL1-202ENST00000477583 DTWD2Q8NBA8 298 aa4.34□□□□□ -1.71
CACUL1-202ENST00000477583 CYB5D2Q8WUJ1 264 aa4.34□□□□□ -1.71
CACUL1-202ENST00000477583 DHX38Q92620 1227 aaKnown RBP4.34□□□□□ -1.71
CACUL1-202ENST00000477583 BACH2Q9BYV9 841 aa4.34□□□□□ -1.71
CACUL1-202ENST00000477583 MCOLN1Q9GZU1 580 aa4.34□□□□□ -1.71
CACUL1-202ENST00000477583 CWC22Q9HCG8 908 aaKnown RBP4.34□□□□□ -1.71
CACUL1-202ENST00000477583 PCDHA11Q9Y5I1 949 aa4.34□□□□□ -1.71
CACUL1-202ENST00000477583 SEMA7AO75326 666 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 RECKO95980 971 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 TFE3P19532 575 aaPredicted RBP4.33□□□□□ -1.72
CACUL1-202ENST00000477583 HOXA5P20719 270 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 ITGAEP38570 1179 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 DLG4P78352 724 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 NR0B2Q15466 257 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 TSNAXIP1Q2TAA8 658 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 TIGD5Q53EQ6 642 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 MEI1Q5TIA1 1274 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 FAM13CQ8NE31 585 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 PPP1R13LQ8WUF5 828 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 CRELD1Q96HD1 420 aa4.33□□□□□ -1.72
CACUL1-202ENST00000477583 INTS4Q96HW7 963 aaKnown RBP4.33□□□□□ -1.72
CACUL1-202ENST00000477583 USP31Q70CQ4 1352 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 MYOCOSA0A1B0GUC4 107 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 PEX10O60683 326 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 PDE6BP35913 854 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 CHRNEQ04844 493 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 DIEXFQ68CQ4 756 aaKnown RBP4.32□□□□□ -1.72
CACUL1-202ENST00000477583 TMEM132EQ6IEE7 984 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 BAHD1Q8TBE0 780 aaPredicted RBP4.32□□□□□ -1.72
CACUL1-202ENST00000477583 RNF141Q8WVD5 230 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 JARID2Q92833 1246 aaPredicted RBP4.32□□□□□ -1.72
CACUL1-202ENST00000477583 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 PARD6AQ9NPB6 346 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 GPR160Q9UJ42 338 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 YBX2Q9Y2T7 364 aaKnown RBP4.32□□□□□ -1.72
CACUL1-202ENST00000477583 CORINQ9Y5Q5 1042 aa4.32□□□□□ -1.72
CACUL1-202ENST00000477583 TEX51A0A1B0GUA7 166 aa4.31□□□□□ -1.72
CACUL1-202ENST00000477583 E9PSI1 815 aa4.31□□□□□ -1.72
CACUL1-202ENST00000477583 RLBP1P12271 317 aa4.31□□□□□ -1.72
CACUL1-202ENST00000477583 PLCG1P19174 1290 aa4.31□□□□□ -1.72
CACUL1-202ENST00000477583 TNNI2P48788 182 aa4.31□□□□□ -1.72
CACUL1-202ENST00000477583 ST13P50502 369 aaKnown RBP4.31□□□□□ -1.72
CACUL1-202ENST00000477583 YARSP54577 528 aaKnown RBP4.31□□□□□ -1.72
CACUL1-202ENST00000477583 DUSP4Q13115 394 aa4.31□□□□□ -1.72
CACUL1-202ENST00000477583 TAF1CQ15572 869 aaPredicted RBP4.31□□□□□ -1.72
CACUL1-202ENST00000477583 NPM2Q86SE8 214 aaKnown RBP4.31□□□□□ -1.72
CACUL1-202ENST00000477583 SPPL2CQ8IUH8 684 aa4.31□□□□□ -1.72
CACUL1-202ENST00000477583 TMEM87AQ8NBN3 555 aa4.31□□□□□ -1.72
CACUL1-202ENST00000477583 C20orf173Q96LM9 149 aa4.31□□□□□ -1.72
CACUL1-202ENST00000477583 ZCCHC4Q9H5U6 513 aa4.31□□□□□ -1.72
CACUL1-202ENST00000477583 CNOT6Q9ULM6 557 aaKnown RBP4.31□□□□□ -1.72
CACUL1-202ENST00000477583 UPK3BL1B0FP48 263 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 UPK3BL2E5RIL1 263 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 RFXAPO00287 272 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 LRRN2O75325 713 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 BPNT1O95861 308 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 BMP7P18075 431 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 SNX17Q15036 470 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 ZNF385BQ569K4 471 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 TCERG1LQ5VWI1 586 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 ANKS4BQ8N8V4 417 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 RELTQ969Z4 430 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 ASPNQ9BXN1 380 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 ZNF552Q9H707 407 aaPredicted RBP4.3□□□□□ -1.72
CACUL1-202ENST00000477583 TLR6Q9Y2C9 796 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 KCTD3Q9Y597 815 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 ADAMTS20P59510 1910 aa4.3□□□□□ -1.72
CACUL1-202ENST00000477583 TEKQ02763 1124 aa4.29□□□□□ -1.72
CACUL1-202ENST00000477583 CLEC16AQ2KHT3 1053 aa4.29□□□□□ -1.72
CACUL1-202ENST00000477583 TMEM201Q5SNT2 666 aa4.29□□□□□ -1.72
CACUL1-202ENST00000477583 SLFN12Q8IYM2 578 aa4.29□□□□□ -1.72
CACUL1-202ENST00000477583 KREMEN1Q96MU8 473 aa4.29□□□□□ -1.72
CACUL1-202ENST00000477583 SGPP1Q9BX95 441 aa4.29□□□□□ -1.72
CACUL1-202ENST00000477583 GCM1Q9NP62 436 aa4.29□□□□□ -1.72
CACUL1-202ENST00000477583 KLHL3Q9UH77 587 aa4.29□□□□□ -1.72
CACUL1-202ENST00000477583 A0A0G2JLL6 359 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms