RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 GATAD2BQ8WXI9 593 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 LRCH3Q96II8 777 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 ZFRQ96KR1 1074 aaKnown RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 TTC1Q99614 292 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 CDC6Q99741 560 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 MENTQ9BUN1 341 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 MRPL4Q9BYD3 311 aaKnown RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 RHOBTB2Q9BYZ6 727 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 PHACTR1Q9C0D0 580 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 MUC3BQ9H195 1237 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 CABP1Q9NZU7 370 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 ZFATQ9P243 1243 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 IP6K2Q9UHH9 426 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 HDAC9Q9UKV0 1011 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 TLR6Q9Y2C9 796 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 CDK13Q14004 1512 aaKnown RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 EHBP1L1Q8N3D4 1523 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 MUC3AQ02505 3323 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 ADCY10Q96PN6 1610 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 TPRP12270 2363 aaKnown RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 SPTBN4Q9H254 2564 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 POTEMA6NI47 508 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 PRPF3O43395 683 aaKnown RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 ADCY3O60266 1144 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 SRGNP10124 158 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 RBP3P10745 1247 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 SLC5A1P13866 664 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 HSD3B1P14060 373 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 EDN3P14138 238 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 POU3F2P20265 443 aaPredicted RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 FLT3P36888 993 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 RENBPP51606 427 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 NUCB1Q02818 461 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 ADCY1Q08828 1119 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 STK3Q13188 491 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 STAT4Q14765 748 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 TLR1Q15399 786 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 CTC1Q2NKJ3 1217 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 ALDH1L2Q3SY69 923 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 C4orf48Q5BLP8 95 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 INTS6LQ5JSJ4 861 aaKnown RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 GPR158Q5T848 1215 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 TTBK2Q6IQ55 1244 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 MZT2BQ6NZ67 158 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 POTEGQ6S5H5 508 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 VASH1Q7L8A9 365 aaPredicted RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 STRA8Q7Z7C7 330 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 ZSCAN30Q86W11 494 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 LSRQ86X29 649 aaPredicted RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 SCUBE1Q8IWY4 988 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 SUGP1Q8IWZ8 645 aaKnown RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 CNTD1Q8N815 330 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 SPATA5Q8NB90 893 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 USP33Q8TEY7 942 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 USP7Q93009 1102 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 KISS1RQ969F8 398 aaPredicted RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 CLIP3Q96DZ5 547 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 TM9SF2Q99805 663 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 MYD88Q99836 296 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 OXCT2Q9BYC2 517 aaPredicted RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 CCDC8Q9H0W5 538 aaPredicted RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 MIR1-1HGQ9H1L0 117 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 RETREG1Q9H6L5 497 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 CNNM2Q9H8M5 875 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 KLHL11Q9NVR0 708 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 ANKIB1Q9P2G1 1089 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 GTF2IRD1Q9UHL9 959 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 TRHDEQ9UKU6 1024 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 SAMM50Q9Y512 469 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 DGKBQ9Y6T7 804 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 MORC2Q9Y6X9 1032 aaPredicted RBP3.47□□□□□ -1.85
HMGN4-202ENST00000477243 TRIOBPQ9H2D6 2365 aa3.47□□□□□ -1.85
HMGN4-202ENST00000477243 FRMPD2Q68DX3 1309 aaPredicted RBP3.46□□□□□ -1.85
HMGN4-202ENST00000477243 ITIH6Q6UXX5 1313 aa3.46□□□□□ -1.85
HMGN4-202ENST00000477243 NUP160Q12769 1436 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 A0A087WZG4 1122 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 A0A1W2PQH9 124 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 hCG_1642624A0A1W2PR95 340 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 A0A1W2PRQ8 180 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 TGFBR3LH3BV60 316 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 GABRDO14764 452 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 TLR3O15455 904 aaKnown RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 DHX16O60231 1041 aaKnown RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 PIP5K1CO60331 668 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 NBNO60934 754 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 STAU1O95793 577 aaKnown RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 F13A1P00488 732 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 RPN1P04843 607 aaKnown RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 APPP05067 770 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 POLR3DP05423 398 aaPredicted RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 PYGMP11217 842 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 CES1P23141 567 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 GTF2E1P29083 439 aaPredicted RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 IREB2P48200 963 aaKnown RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 ARSDP51689 593 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 NEK4P51957 841 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 BTKQ06187 659 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 ELF2Q15723 593 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms