RNA–Protein interactions for RNA: ENST00000476109.5

SUPT20H-213, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 769 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-213ENST00000476109 LBX2Q6XYB7 198 aa23.73■■□□□ 1.39
SUPT20H-213ENST00000476109 SIAH1Q8IUQ4 282 aa23.73■■□□□ 1.39
SUPT20H-213ENST00000476109 NPLOC4Q8TAT6 608 aa23.73■■□□□ 1.39
SUPT20H-213ENST00000476109 CWC22Q9HCG8 908 aaKnown RBP23.73■■□□□ 1.39
SUPT20H-213ENST00000476109 CAPN2P17655 700 aa23.72■■□□□ 1.39
SUPT20H-213ENST00000476109 PTPREP23469 700 aa23.72■■□□□ 1.39
SUPT20H-213ENST00000476109 GDF15Q99988 308 aa23.72■■□□□ 1.39
SUPT20H-213ENST00000476109 COL6A3P12111 3177 aa23.72■■□□□ 1.39
SUPT20H-213ENST00000476109 RAB11FIP3O75154 756 aa23.71■■□□□ 1.39
SUPT20H-213ENST00000476109 MS4A1P11836 297 aa23.71■■□□□ 1.39
SUPT20H-213ENST00000476109 COL6A1P12109 1028 aa23.71■■□□□ 1.39
SUPT20H-213ENST00000476109 ATP5JP18859 108 aa23.71■■□□□ 1.39
SUPT20H-213ENST00000476109 GRB14Q14449 540 aa23.71■■□□□ 1.39
SUPT20H-213ENST00000476109 TRPV1Q8NER1 839 aa23.71■■□□□ 1.39
SUPT20H-213ENST00000476109 HAUS7Q99871 368 aa23.71■■□□□ 1.39
SUPT20H-213ENST00000476109 RCAN3Q9UKA8 241 aa23.71■■□□□ 1.39
SUPT20H-213ENST00000476109 COL11A1P12107 1806 aaPredicted RBP23.7■■□□□ 1.39
SUPT20H-213ENST00000476109 ZNF236Q9UL36 1845 aa23.7■■□□□ 1.39
SUPT20H-213ENST00000476109 SLC15A5A6NIM6 579 aa23.7■■□□□ 1.38
SUPT20H-213ENST00000476109 CCNA1P78396 465 aa23.7■■□□□ 1.38
SUPT20H-213ENST00000476109 TRMT44Q8IYL2 757 aaKnown RBP23.7■■□□□ 1.38
SUPT20H-213ENST00000476109 MOV10L1Q9BXT6 1211 aaKnown RBP23.7■■□□□ 1.38
SUPT20H-213ENST00000476109 TANGO6Q9C0B7 1094 aa23.7■■□□□ 1.38
SUPT20H-213ENST00000476109 CYP2C19P33261 490 aa23.69■■□□□ 1.38
SUPT20H-213ENST00000476109 MAGEA10P43363 369 aaPredicted RBP23.69■■□□□ 1.38
SUPT20H-213ENST00000476109 LRRC26Q2I0M4 334 aa23.69■■□□□ 1.38
SUPT20H-213ENST00000476109 SPICE1Q8N0Z3 855 aa23.69■■□□□ 1.38
SUPT20H-213ENST00000476109 IGHA2P01877 340 aa23.68■■□□□ 1.38
SUPT20H-213ENST00000476109 TMEM179Q6ZVK1 233 aa23.68■■□□□ 1.38
SUPT20H-213ENST00000476109 ATG4CQ96DT6 458 aa23.67■■□□□ 1.38
SUPT20H-213ENST00000476109 PUS7LQ9H0K6 701 aaKnown RBP23.67■■□□□ 1.38
SUPT20H-213ENST00000476109 USP17L12C9JPN9 530 aa23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 USP17L21D6R901 530 aa23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 HOXC6P09630 235 aa23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 CDK8P49336 464 aa23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 ICA1Q05084 483 aa23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 C12orf60Q5U649 245 aa23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 TSHZ3Q63HK5 1081 aa23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 SAMD1Q6SPF0 538 aaPredicted RBP23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 SWAP70Q9UH65 585 aa23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 IVNS1ABPQ9Y6Y0 642 aa23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 GREB1LQ9C091 1923 aaPredicted RBP23.66■■□□□ 1.38
SUPT20H-213ENST00000476109 A0A1W2PPC1 479 aa23.65■■□□□ 1.38
SUPT20H-213ENST00000476109 COBLO75128 1261 aa23.65■■□□□ 1.38
SUPT20H-213ENST00000476109 GLRX3O76003 335 aaKnown RBP23.65■■□□□ 1.38
SUPT20H-213ENST00000476109 ERCC3P19447 782 aa23.65■■□□□ 1.38
SUPT20H-213ENST00000476109 ADORA2AP29274 412 aa23.65■■□□□ 1.38
SUPT20H-213ENST00000476109 COG2Q14746 738 aa23.65■■□□□ 1.38
SUPT20H-213ENST00000476109 MFSD14CQ5VZR4 134 aa23.65■■□□□ 1.38
SUPT20H-213ENST00000476109 SPATC1LQ9H0A9 340 aa23.65■■□□□ 1.38
SUPT20H-213ENST00000476109 ATP8A2Q9NTI2 1148 aa23.65■■□□□ 1.38
SUPT20H-213ENST00000476109 DSG3P32926 999 aa23.64■■□□□ 1.37
SUPT20H-213ENST00000476109 ATP2B2Q01814 1243 aa23.64■■□□□ 1.37
SUPT20H-213ENST00000476109 LRRCC1Q9C099 1032 aa23.64■■□□□ 1.37
SUPT20H-213ENST00000476109 FBXO28Q9NVF7 368 aa23.64■■□□□ 1.37
SUPT20H-213ENST00000476109 DDX20Q9UHI6 824 aaKnown RBP23.64■■□□□ 1.37
SUPT20H-213ENST00000476109 TMX2Q9Y320 296 aa23.64■■□□□ 1.37
SUPT20H-213ENST00000476109 SLC4A4Q9Y6R1 1079 aa23.64■■□□□ 1.37
SUPT20H-213ENST00000476109 LAMA2P24043 3122 aaKnown RBP23.64■■□□□ 1.37
SUPT20H-213ENST00000476109 ZNFX1Q9P2E3 1918 aaKnown RBP23.64■■□□□ 1.37
SUPT20H-213ENST00000476109 FLOT1O75955 427 aa23.63■■□□□ 1.37
SUPT20H-213ENST00000476109 CYBAP13498 195 aa23.63■■□□□ 1.37
SUPT20H-213ENST00000476109 CNGA1P29973 690 aa23.63■■□□□ 1.37
SUPT20H-213ENST00000476109 BMP8BP34820 402 aa23.63■■□□□ 1.37
SUPT20H-213ENST00000476109 UBE3CQ15386 1083 aa23.63■■□□□ 1.37
SUPT20H-213ENST00000476109 ANO1Q5XXA6 986 aa23.63■■□□□ 1.37
SUPT20H-213ENST00000476109 CTR9Q6PD62 1173 aa23.63■■□□□ 1.37
SUPT20H-213ENST00000476109 C16orf86Q6ZW13 317 aa23.63■■□□□ 1.37
SUPT20H-213ENST00000476109 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.63■■□□□ 1.37
SUPT20H-213ENST00000476109 VCPKMTQ9H867 229 aa23.63■■□□□ 1.37
SUPT20H-213ENST00000476109 EEF2P13639 858 aaKnown RBP23.62■■□□□ 1.37
SUPT20H-213ENST00000476109 PLS1Q14651 629 aa23.62■■□□□ 1.37
SUPT20H-213ENST00000476109 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.62■■□□□ 1.37
SUPT20H-213ENST00000476109 ARHGEF10LQ9HCE6 1279 aa23.62■■□□□ 1.37
SUPT20H-213ENST00000476109 STK11IPQ8N1F8 1099 aa23.61■■□□□ 1.37
SUPT20H-213ENST00000476109 HOXC10Q9NYD6 342 aa23.61■■□□□ 1.37
SUPT20H-213ENST00000476109 ATN1P54259 1190 aaPredicted RBP23.6■■□□□ 1.37
SUPT20H-213ENST00000476109 TMEM132BQ14DG7 1078 aa23.6■■□□□ 1.37
SUPT20H-213ENST00000476109 PRAMEF19Q5SWL8 479 aa23.6■■□□□ 1.37
SUPT20H-213ENST00000476109 DPP9Q86TI2 863 aa23.6■■□□□ 1.37
SUPT20H-213ENST00000476109 SHCBP1Q8NEM2 672 aa23.6■■□□□ 1.37
SUPT20H-213ENST00000476109 LPAR1Q92633 364 aa23.6■■□□□ 1.37
SUPT20H-213ENST00000476109 SENP6Q9GZR1 1112 aaPredicted RBP23.6■■□□□ 1.37
SUPT20H-213ENST00000476109 LTBP2Q14767 1821 aa23.59■■□□□ 1.37
SUPT20H-213ENST00000476109 MDM2Q00987 491 aaPredicted RBP23.59■■□□□ 1.37
SUPT20H-213ENST00000476109 GJC2Q5T442 439 aaPredicted RBP23.59■■□□□ 1.37
SUPT20H-213ENST00000476109 Q7L0L9 218 aa23.59■■□□□ 1.37
SUPT20H-213ENST00000476109 NCAPG2Q86XI2 1143 aa23.59■■□□□ 1.37
SUPT20H-213ENST00000476109 PLXNA1Q9UIW2 1896 aa23.59■■□□□ 1.37
SUPT20H-213ENST00000476109 OLFML2BQ68BL8 750 aa23.58■■□□□ 1.37
SUPT20H-213ENST00000476109 OSBP2Q969R2 916 aa23.58■■□□□ 1.37
SUPT20H-213ENST00000476109 CCDC17Q96LX7 622 aa23.58■■□□□ 1.37
SUPT20H-213ENST00000476109 STRBPQ96SI9 672 aaKnown RBP23.58■■□□□ 1.37
SUPT20H-213ENST00000476109 UBE2OQ9C0C9 1292 aaKnown RBP23.58■■□□□ 1.37
SUPT20H-213ENST00000476109 SMCHD1A6NHR9 2005 aa23.58■■□□□ 1.37
SUPT20H-213ENST00000476109 WDR46O15213 610 aaKnown RBP23.57■■□□□ 1.36
SUPT20H-213ENST00000476109 TDHQ8IZJ6 230 aa23.57■■□□□ 1.36
SUPT20H-213ENST00000476109 MB21D1Q8N884 522 aa23.57■■□□□ 1.36
SUPT20H-213ENST00000476109 NUP88Q99567 741 aaPredicted RBP23.57■■□□□ 1.36
SUPT20H-213ENST00000476109 EPB41L4AQ9HCS5 686 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms