RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 RGS13O14921 159 aa7.92□□□□□ -1.14
LTN1-204ENST00000475344 GDNFP39905 211 aa7.92□□□□□ -1.14
LTN1-204ENST00000475344 ZNF165P49910 485 aa7.92□□□□□ -1.14
LTN1-204ENST00000475344 EGR3Q06889 387 aa7.92□□□□□ -1.14
LTN1-204ENST00000475344 TRIM26Q12899 539 aaPredicted RBP7.92□□□□□ -1.14
LTN1-204ENST00000475344 ZNF648Q5T619 568 aaPredicted RBP7.92□□□□□ -1.14
LTN1-204ENST00000475344 TSPYL5Q86VY4 417 aaPredicted RBP7.92□□□□□ -1.14
LTN1-204ENST00000475344 TMEM40Q8WWA1 233 aa7.92□□□□□ -1.14
LTN1-204ENST00000475344 CCDC120Q96HB5 630 aa7.92□□□□□ -1.14
LTN1-204ENST00000475344 SHISA3A0PJX4 238 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 LRRC10BA6NIK2 292 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 UBOX5O94941 541 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 ATE1O95260 518 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 FANCCQ00597 558 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 MLANAQ16655 118 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 MPZL3Q6UWV2 235 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 KRTAP19-1Q8IUB9 90 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 EAF1Q96JC9 268 aaPredicted RBP7.91□□□□□ -1.14
LTN1-204ENST00000475344 NT5C1AQ9BXI3 368 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 ASCC2Q9H1I8 757 aaPredicted RBP7.91□□□□□ -1.14
LTN1-204ENST00000475344 ANTXR1Q9H6X2 564 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 TMEM59LQ9UK28 342 aa7.91□□□□□ -1.14
LTN1-204ENST00000475344 RBM47A0AV96 593 aaKnown RBP7.9□□□□□ -1.14
LTN1-204ENST00000475344 SRFP11831 508 aa7.9□□□□□ -1.14
LTN1-204ENST00000475344 RAC2P15153 192 aa7.9□□□□□ -1.14
LTN1-204ENST00000475344 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.14
LTN1-204ENST00000475344 ERVFC1P60507 584 aa7.9□□□□□ -1.14
LTN1-204ENST00000475344 GAB4Q2WGN9 574 aa7.9□□□□□ -1.14
LTN1-204ENST00000475344 POU5F2Q8N7G0 328 aa7.9□□□□□ -1.14
LTN1-204ENST00000475344 RNF34Q969K3 372 aa7.9□□□□□ -1.14
LTN1-204ENST00000475344 SYTL4Q96C24 671 aaPredicted RBP7.9□□□□□ -1.14
LTN1-204ENST00000475344 ATG4CQ96DT6 458 aa7.9□□□□□ -1.14
LTN1-204ENST00000475344 LIN37Q96GY3 246 aaPredicted RBP7.9□□□□□ -1.14
LTN1-204ENST00000475344 ZNF512BQ96KM6 892 aaPredicted RBP7.9□□□□□ -1.14
LTN1-204ENST00000475344 ADAMTS10Q9H324 1103 aa7.9□□□□□ -1.14
LTN1-204ENST00000475344 EHMT1Q9H9B1 1298 aa7.9□□□□□ -1.14
LTN1-204ENST00000475344 PCDHA11Q9Y5I1 949 aa7.9□□□□□ -1.14
LTN1-204ENST00000475344 FAM86C2PA6NEL3 165 aa7.89□□□□□ -1.15
LTN1-204ENST00000475344 RNF4P78317 190 aa7.89□□□□□ -1.15
LTN1-204ENST00000475344 TMEM67Q5HYA8 995 aa7.89□□□□□ -1.15
LTN1-204ENST00000475344 NLRC3Q7RTR2 1065 aa7.89□□□□□ -1.15
LTN1-204ENST00000475344 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.89□□□□□ -1.15
LTN1-204ENST00000475344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.89□□□□□ -1.15
LTN1-204ENST00000475344 ZNF503-AS2A6NEH8 195 aa7.88□□□□□ -1.15
LTN1-204ENST00000475344 FARP2O94887 1054 aaPredicted RBP7.88□□□□□ -1.15
LTN1-204ENST00000475344 C8AP07357 584 aa7.88□□□□□ -1.15
LTN1-204ENST00000475344 GLI1P08151 1106 aa7.88□□□□□ -1.15
LTN1-204ENST00000475344 LCE3BQ5TA77 95 aa7.88□□□□□ -1.15
LTN1-204ENST00000475344 CDCP2Q5VXM1 449 aa7.88□□□□□ -1.15
LTN1-204ENST00000475344 FBXW10Q5XX13 1052 aa7.88□□□□□ -1.15
LTN1-204ENST00000475344 SLITRK4Q8IW52 837 aa7.88□□□□□ -1.15
LTN1-204ENST00000475344 REXO1Q8N1G1 1221 aaKnown RBP7.88□□□□□ -1.15
LTN1-204ENST00000475344 CNNM2Q9H8M5 875 aa7.88□□□□□ -1.15
LTN1-204ENST00000475344 METTL5Q9NRN9 209 aaKnown RBP7.88□□□□□ -1.15
LTN1-204ENST00000475344 CLEC3AO75596 197 aa7.87□□□□□ -1.15
LTN1-204ENST00000475344 RECKO95980 971 aa7.87□□□□□ -1.15
LTN1-204ENST00000475344 NMIQ13287 307 aaPredicted RBP7.87□□□□□ -1.15
LTN1-204ENST00000475344 ZNF124Q15973 351 aa7.87□□□□□ -1.15
LTN1-204ENST00000475344 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
LTN1-204ENST00000475344 ABHD4Q8TB40 342 aa7.87□□□□□ -1.15
LTN1-204ENST00000475344 MYLIPQ8WY64 445 aa7.87□□□□□ -1.15
LTN1-204ENST00000475344 VWCEQ96DN2 955 aa7.87□□□□□ -1.15
LTN1-204ENST00000475344 FAM53CQ9NYF3 392 aa7.87□□□□□ -1.15
LTN1-204ENST00000475344 SNW1Q13573 536 aaKnown RBP7.86□□□□□ -1.15
LTN1-204ENST00000475344 LRRFIP1Q32MZ4 808 aaKnown RBP7.86□□□□□ -1.15
LTN1-204ENST00000475344 NBPF12Q5TAG4 269 aaPredicted RBP7.86□□□□□ -1.15
LTN1-204ENST00000475344 TMC3Q7Z5M5 1100 aa7.86□□□□□ -1.15
LTN1-204ENST00000475344 KSR1Q8IVT5 923 aa7.86□□□□□ -1.15
LTN1-204ENST00000475344 FERD3LQ96RJ6 166 aa7.86□□□□□ -1.15
LTN1-204ENST00000475344 MKRN2Q9H000 416 aaKnown RBP7.86□□□□□ -1.15
LTN1-204ENST00000475344 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.85□□□□□ -1.15
LTN1-204ENST00000475344 NME1P15531 152 aaKnown RBP7.85□□□□□ -1.15
LTN1-204ENST00000475344 TRHRP34981 398 aaPredicted RBP7.85□□□□□ -1.15
LTN1-204ENST00000475344 PRR23BQ6ZRT6 265 aa7.85□□□□□ -1.15
LTN1-204ENST00000475344 SLC6A18Q96N87 628 aa7.85□□□□□ -1.15
LTN1-204ENST00000475344 DIRC2Q96SL1 478 aa7.85□□□□□ -1.15
LTN1-204ENST00000475344 SLC38A3Q99624 504 aa7.85□□□□□ -1.15
LTN1-204ENST00000475344 C19orf44Q9H6X5 657 aa7.85□□□□□ -1.15
LTN1-204ENST00000475344 SSU72P8A0A1W2PR75 194 aa7.84□□□□□ -1.15
LTN1-204ENST00000475344 SCAMP3O14828 347 aaKnown RBP7.84□□□□□ -1.15
LTN1-204ENST00000475344 RACK1P63244 317 aaKnown RBP7.84□□□□□ -1.15
LTN1-204ENST00000475344 RAD51AP2Q09MP3 1159 aa7.84□□□□□ -1.15
LTN1-204ENST00000475344 PKN1Q16512 942 aa7.84□□□□□ -1.15
LTN1-204ENST00000475344 MRRFQ96E11 262 aaKnown RBP7.84□□□□□ -1.15
LTN1-204ENST00000475344 FBXL21Q9UKT6 434 aa7.84□□□□□ -1.15
LTN1-204ENST00000475344 MEIS1O00470 390 aa7.83□□□□□ -1.16
LTN1-204ENST00000475344 HPXP02790 462 aa7.83□□□□□ -1.16
LTN1-204ENST00000475344 ZGLP1P0C6A0 271 aa7.83□□□□□ -1.16
LTN1-204ENST00000475344 RPL10P27635 214 aaKnown RBP7.83□□□□□ -1.16
LTN1-204ENST00000475344 NBPF9Q3BBW0 867 aa7.83□□□□□ -1.16
LTN1-204ENST00000475344 TMEM192Q8IY95 271 aa7.83□□□□□ -1.16
LTN1-204ENST00000475344 DHX38Q92620 1227 aaKnown RBP7.83□□□□□ -1.16
LTN1-204ENST00000475344 SLC9A7Q96T83 725 aa7.83□□□□□ -1.16
LTN1-204ENST00000475344 HDAC8Q9BY41 377 aa7.83□□□□□ -1.16
LTN1-204ENST00000475344 FOXP3Q9BZS1 431 aa7.83□□□□□ -1.16
LTN1-204ENST00000475344 DDX41Q9UJV9 622 aaKnown RBP7.83□□□□□ -1.16
LTN1-204ENST00000475344 MINPP1Q9UNW1 487 aa7.83□□□□□ -1.16
LTN1-204ENST00000475344 MEIS3P2A8K0S8 358 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 FKTNO75072 461 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 CCNFP41002 786 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms