RNA–Protein interactions for RNA: ENST00000474345.5

FDPS-210, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-210ENST00000474345 LBX1P52954 281 aa17.9■□□□□ 0.46
FDPS-210ENST00000474345 PABPC4Q13310 644 aaKnown RBP eCLIP17.9■□□□□ 0.46
FDPS-210ENST00000474345 F5H6K3 240 aa17.89■□□□□ 0.45
FDPS-210ENST00000474345 GPR25O00155 361 aa17.89■□□□□ 0.45
FDPS-210ENST00000474345 TLR2O60603 784 aa17.89■□□□□ 0.45
FDPS-210ENST00000474345 VCAM1P19320 739 aa17.89■□□□□ 0.45
FDPS-210ENST00000474345 KLRC3Q07444 240 aa17.89■□□□□ 0.45
FDPS-210ENST00000474345 CATSPERGQ6ZRH7 1159 aa17.89■□□□□ 0.45
FDPS-210ENST00000474345 P2RX7Q99572 595 aaKnown RBP17.89■□□□□ 0.45
FDPS-210ENST00000474345 ZKSCAN3Q9BRR0 538 aa17.89■□□□□ 0.45
FDPS-210ENST00000474345 CNNM2Q9H8M5 875 aa17.89■□□□□ 0.45
FDPS-210ENST00000474345 STX8Q9UNK0 236 aa17.89■□□□□ 0.45
FDPS-210ENST00000474345 CASP8AP2Q9UKL3 1982 aa17.89■□□□□ 0.45
FDPS-210ENST00000474345 USP17L15C9J2P7 530 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 USP17L13C9JLJ4 530 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 USP17L11C9JVI0 530 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 USP17L18D6R9N7 530 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 USP17L22D6RA61 530 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 USP17L17D6RBQ6 530 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 USP17L19D6RCP7 530 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 USP17L20D6RJB6 530 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 REC8O95072 547 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 USP17L24Q0WX57 530 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 TRDNQ13061 729 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 NOM1Q5C9Z4 860 aaKnown RBP17.88■□□□□ 0.45
FDPS-210ENST00000474345 PPP4R3BQ5MIZ7 849 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 RCSD1Q6JBY9 416 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 C17orf99Q6UX52 265 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 CYB5R4Q7L1T6 521 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 SPICE1Q8N0Z3 855 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 TTC14Q96N46 770 aa17.88■□□□□ 0.45
FDPS-210ENST00000474345 PARK7Q99497 189 aaKnown RBP17.88■□□□□ 0.45
FDPS-210ENST00000474345 ASCC2Q9H1I8 757 aaPredicted RBP17.88■□□□□ 0.45
FDPS-210ENST00000474345 RASEFQ8IZ41 740 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 LRRC47Q8N1G4 583 aaKnown RBP17.87■□□□□ 0.45
FDPS-210ENST00000474345 NCOA7Q8NI08 942 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 ANKS1AQ92625 1134 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 LPAR1Q92633 364 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 KCNB2Q92953 911 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 TMEM47Q9BQJ4 181 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 RPAP3Q9H6T3 665 aaPredicted RBP17.87■□□□□ 0.45
FDPS-210ENST00000474345 GOPCQ9HD26 462 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 CPA4Q9UI42 421 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 PNMA3Q9UL41 463 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 SYNPO2Q9UMS6 1093 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 ADGRA2Q96PE1 1338 aa17.87■□□□□ 0.45
FDPS-210ENST00000474345 RAD21O60216 631 aa17.86■□□□□ 0.45
FDPS-210ENST00000474345 HSPA4P34932 840 aa17.86■□□□□ 0.45
FDPS-210ENST00000474345 TSGA10IPQ3SY00 556 aa17.86■□□□□ 0.45
FDPS-210ENST00000474345 RNF20Q5VTR2 975 aa17.86■□□□□ 0.45
FDPS-210ENST00000474345 SLFN13Q68D06 897 aa17.86■□□□□ 0.45
FDPS-210ENST00000474345 IQCA1Q86XH1 822 aa17.86■□□□□ 0.45
FDPS-210ENST00000474345 DGKHQ86XP1 1220 aa17.86■□□□□ 0.45
FDPS-210ENST00000474345 GMCL1P1Q8NEA9 526 aa17.86■□□□□ 0.45
FDPS-210ENST00000474345 ZNF296Q8WUU4 475 aaPredicted RBP17.86■□□□□ 0.45
FDPS-210ENST00000474345 ZSCAN10Q96SZ4 725 aaPredicted RBP17.86■□□□□ 0.45
FDPS-210ENST00000474345 WDR46O15213 610 aaKnown RBP17.85■□□□□ 0.45
FDPS-210ENST00000474345 EPB41L2O43491 1005 aaKnown RBP17.85■□□□□ 0.45
FDPS-210ENST00000474345 NDUFB10O96000 172 aa17.85■□□□□ 0.45
FDPS-210ENST00000474345 BCRP11274 1271 aa17.85■□□□□ 0.45
FDPS-210ENST00000474345 TOP1P11387 765 aaKnown RBP17.85■□□□□ 0.45
FDPS-210ENST00000474345 IRX3P78415 501 aaPredicted RBP17.85■□□□□ 0.45
FDPS-210ENST00000474345 CCDC178Q5BJE1 867 aa17.85■□□□□ 0.45
FDPS-210ENST00000474345 POTEEQ6S8J3 1075 aa17.85■□□□□ 0.45
FDPS-210ENST00000474345 MB21D2Q8IYB1 491 aaPredicted RBP17.85■□□□□ 0.45
FDPS-210ENST00000474345 PRDM10Q9NQV6 1147 aa17.85■□□□□ 0.45
FDPS-210ENST00000474345 FKTNO75072 461 aa17.84■□□□□ 0.45
FDPS-210ENST00000474345 HERVK_113P62684 666 aa17.84■□□□□ 0.45
FDPS-210ENST00000474345 SP3Q02447 781 aa17.84■□□□□ 0.45
FDPS-210ENST00000474345 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
FDPS-210ENST00000474345 COG2Q14746 738 aa17.84■□□□□ 0.45
FDPS-210ENST00000474345 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
FDPS-210ENST00000474345 RALYLQ86SE5 291 aaKnown RBP17.84■□□□□ 0.45
FDPS-210ENST00000474345 SMCR8Q8TEV9 937 aaPredicted RBP17.84■□□□□ 0.45
FDPS-210ENST00000474345 NUP88Q99567 741 aaPredicted RBP17.84■□□□□ 0.45
FDPS-210ENST00000474345 RLFQ13129 1914 aa17.84■□□□□ 0.45
FDPS-210ENST00000474345 SEC24BO95487 1268 aa17.83■□□□□ 0.44
FDPS-210ENST00000474345 MCCP23508 829 aa17.83■□□□□ 0.44
FDPS-210ENST00000474345 GCLCP48506 637 aaPredicted RBP17.83■□□□□ 0.44
FDPS-210ENST00000474345 ANTXR2P58335 489 aa17.83■□□□□ 0.44
FDPS-210ENST00000474345 SEC23AQ15436 765 aa17.83■□□□□ 0.44
FDPS-210ENST00000474345 FAM83BQ5T0W9 1011 aa17.83■□□□□ 0.44
FDPS-210ENST00000474345 ENAHQ8N8S7 591 aaPredicted RBP17.83■□□□□ 0.44
FDPS-210ENST00000474345 CHMP4CQ96CF2 233 aa17.83■□□□□ 0.44
FDPS-210ENST00000474345 TANGO6Q9C0B7 1094 aa17.83■□□□□ 0.44
FDPS-210ENST00000474345 HOXC10Q9NYD6 342 aa17.83■□□□□ 0.44
FDPS-210ENST00000474345 RBPJLQ9UBG7 517 aa17.83■□□□□ 0.44
FDPS-210ENST00000474345 TNKSO95271 1327 aa17.82■□□□□ 0.44
FDPS-210ENST00000474345 PEX10O60683 326 aa17.82■□□□□ 0.44
FDPS-210ENST00000474345 BMP3P12645 472 aa17.82■□□□□ 0.44
FDPS-210ENST00000474345 ZKSCAN1P17029 563 aaPredicted RBP17.82■□□□□ 0.44
FDPS-210ENST00000474345 DSG3P32926 999 aa17.82■□□□□ 0.44
FDPS-210ENST00000474345 Q3C1V9 767 aa17.82■□□□□ 0.44
FDPS-210ENST00000474345 ADCK5Q3MIX3 580 aa17.82■□□□□ 0.44
FDPS-210ENST00000474345 ANKRD13CQ8N6S4 541 aa17.82■□□□□ 0.44
FDPS-210ENST00000474345 NEK1Q96PY6 1258 aa17.82■□□□□ 0.44
FDPS-210ENST00000474345 UBAC1Q9BSL1 405 aa17.82■□□□□ 0.44
FDPS-210ENST00000474345 SNX14Q9Y5W7 946 aa17.82■□□□□ 0.44
FDPS-210ENST00000474345 SPDYE16A6NNV3 312 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms